Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Gm25710-201ENSMUST00000178367 79 ntBASIC2.36□□□□□ -2.03
Usp39Q3TIX9 Gm23575-201ENSMUST00000178406 79 ntBASIC2.36□□□□□ -2.03
Usp39Q3TIX9 Gm24872-201ENSMUST00000178434 79 ntBASIC2.36□□□□□ -2.03
Usp39Q3TIX9 Gm22449-201ENSMUST00000178924 79 ntBASIC2.36□□□□□ -2.03
Usp39Q3TIX9 Gm24702-201ENSMUST00000178965 79 ntBASIC2.36□□□□□ -2.03
Usp39Q3TIX9 Gm24206-201ENSMUST00000179011 79 ntBASIC2.36□□□□□ -2.03
Usp39Q3TIX9 Mir669j-201ENSMUST00000179023 121 ntBASIC2.36□□□□□ -2.03
Usp39Q3TIX9 Gm24528-201ENSMUST00000179164 79 ntBASIC2.36□□□□□ -2.03
Usp39Q3TIX9 Gm22909-201ENSMUST00000179190 79 ntBASIC2.36□□□□□ -2.03
Usp39Q3TIX9 Gm26334-201ENSMUST00000179403 79 ntBASIC2.36□□□□□ -2.03
Usp39Q3TIX9 Gm25463-201ENSMUST00000179405 79 ntBASIC2.36□□□□□ -2.03
Usp39Q3TIX9 Gm25742-201ENSMUST00000179530 79 ntBASIC2.36□□□□□ -2.03
Usp39Q3TIX9 Gm25209-201ENSMUST00000179576 79 ntBASIC2.36□□□□□ -2.03
Usp39Q3TIX9 Gm26392-201ENSMUST00000179661 79 ntBASIC2.36□□□□□ -2.03
Usp39Q3TIX9 Gm25230-201ENSMUST00000179740 79 ntBASIC2.36□□□□□ -2.03
Usp39Q3TIX9 Gm26434-201ENSMUST00000179778 79 ntBASIC2.36□□□□□ -2.03
Usp39Q3TIX9 Gm25741-201ENSMUST00000179825 79 ntBASIC2.36□□□□□ -2.03
Usp39Q3TIX9 Gm24759-201ENSMUST00000179827 79 ntBASIC2.36□□□□□ -2.03
Usp39Q3TIX9 Gm24219-201ENSMUST00000179861 79 ntBASIC2.36□□□□□ -2.03
Usp39Q3TIX9 Gm3852-201ENSMUST00000182781 264 ntBASIC2.36□□□□□ -2.03
Usp39Q3TIX9 Mir6350-201ENSMUST00000183639 105 ntBASIC2.36□□□□□ -2.03
Usp39Q3TIX9 Gm27668-201ENSMUST00000184188 120 ntBASIC2.36□□□□□ -2.03
Usp39Q3TIX9 Gm27959-201ENSMUST00000185172 111 ntBASIC2.36□□□□□ -2.03
Usp39Q3TIX9 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.36□□□□□ -2.03
Usp39Q3TIX9 Gm23254-201ENSMUST00000097244 79 ntBASIC2.36□□□□□ -2.03
Usp39Q3TIX9 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Usp39Q3TIX9 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Usp39Q3TIX9 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Usp39Q3TIX9 Gm25529-201ENSMUST00000104850 92 ntBASIC2.35□□□□□ -2.03
Usp39Q3TIX9 Gm24274-201ENSMUST00000116787 124 ntBASIC2.35□□□□□ -2.03
Usp39Q3TIX9 Gm13862-201ENSMUST00000121220 197 ntBASIC2.35□□□□□ -2.03
Usp39Q3TIX9 Gm25323-201ENSMUST00000122555 103 ntBASIC2.35□□□□□ -2.03
Usp39Q3TIX9 Gm25888-201ENSMUST00000157778 302 ntBASIC2.35□□□□□ -2.03
Usp39Q3TIX9 Gm24212-201ENSMUST00000158258 132 ntBASIC2.35□□□□□ -2.03
Usp39Q3TIX9 Gm24842-201ENSMUST00000158681 54 ntBASIC2.35□□□□□ -2.03
Usp39Q3TIX9 Gm43901-201ENSMUST00000203247 453 ntBASIC2.35□□□□□ -2.03
Usp39Q3TIX9 Gm44921-201ENSMUST00000205290 301 ntBASIC2.35□□□□□ -2.03
Usp39Q3TIX9 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
Usp39Q3TIX9 Snord100-201ENSMUST00000116836 74 ntBASIC2.34□□□□□ -2.03
Usp39Q3TIX9 Gm2830-201ENSMUST00000140330 385 ntBASIC2.34□□□□□ -2.03
Usp39Q3TIX9 Gm22490-201ENSMUST00000157188 119 ntBASIC2.34□□□□□ -2.03
Usp39Q3TIX9 Gm22227-201ENSMUST00000157356 259 ntBASIC2.34□□□□□ -2.03
Usp39Q3TIX9 Gm24837-201ENSMUST00000158683 81 ntBASIC2.34□□□□□ -2.03
Usp39Q3TIX9 Gm44358-201ENSMUST00000196301 98 ntBASIC2.34□□□□□ -2.03
Usp39Q3TIX9 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Usp39Q3TIX9 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
Usp39Q3TIX9 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Usp39Q3TIX9 n-R5s158-201ENSMUST00000104095 118 ntBASIC2.33□□□□□ -2.04
Usp39Q3TIX9 Gm23015-201ENSMUST00000104145 128 ntBASIC2.33□□□□□ -2.04
Usp39Q3TIX9 Gm24670-201ENSMUST00000104154 132 ntBASIC2.33□□□□□ -2.04
Usp39Q3TIX9 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Usp39Q3TIX9 Gm25753-201ENSMUST00000116792 121 ntBASIC2.33□□□□□ -2.04
Usp39Q3TIX9 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.33□□□□□ -2.04
Usp39Q3TIX9 Gm22558-201ENSMUST00000157326 95 ntBASIC2.33□□□□□ -2.04
Usp39Q3TIX9 Gm23588-201ENSMUST00000157659 99 ntBASIC2.33□□□□□ -2.04
Usp39Q3TIX9 Gm24210-201ENSMUST00000158263 133 ntBASIC2.33□□□□□ -2.04
Usp39Q3TIX9 Gm23858-201ENSMUST00000158384 106 ntBASIC2.33□□□□□ -2.04
Usp39Q3TIX9 Gm24390-201ENSMUST00000179578 62 ntBASIC2.33□□□□□ -2.04
Usp39Q3TIX9 Gm43381-201ENSMUST00000198553 165 ntBASIC2.33□□□□□ -2.04
Usp39Q3TIX9 Gm44482-201ENSMUST00000199232 103 ntBASIC2.33□□□□□ -2.04
Usp39Q3TIX9 Gm44478-201ENSMUST00000204875 114 ntBASIC2.33□□□□□ -2.04
Usp39Q3TIX9 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC2.33□□□□□ -2.04
Usp39Q3TIX9 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.33□□□□□ -2.04
Usp39Q3TIX9 Gm24615-201ENSMUST00000083268 113 ntBASIC2.33□□□□□ -2.04
Usp39Q3TIX9 Gm25513-201ENSMUST00000083861 162 ntBASIC2.33□□□□□ -2.04
Usp39Q3TIX9 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Usp39Q3TIX9 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.33□□□□□ -2.04
Usp39Q3TIX9 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.32□□□□□ -2.04
Usp39Q3TIX9 Gm22004-201ENSMUST00000101884 107 ntBASIC2.32□□□□□ -2.04
Usp39Q3TIX9 Gm23889-201ENSMUST00000122689 104 ntBASIC2.32□□□□□ -2.04
Usp39Q3TIX9 Gm25825-201ENSMUST00000157091 124 ntBASIC2.32□□□□□ -2.04
Usp39Q3TIX9 Gm24650-201ENSMUST00000157105 103 ntBASIC2.32□□□□□ -2.04
Usp39Q3TIX9 Gm20438-201ENSMUST00000174441 329 ntBASIC2.32□□□□□ -2.04
Usp39Q3TIX9 AC160962.3-201ENSMUST00000225914 112 ntBASIC2.32□□□□□ -2.04
Usp39Q3TIX9 Gm25130-201ENSMUST00000082650 156 ntBASIC2.32□□□□□ -2.04
Usp39Q3TIX9 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.32□□□□□ -2.04
Usp39Q3TIX9 Gm23246-201ENSMUST00000083371 67 ntBASIC2.32□□□□□ -2.04
Usp39Q3TIX9 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Usp39Q3TIX9 Gm44177-201ENSMUST00000204338 2667 ntBASIC2.32□□□□□ -2.04
Usp39Q3TIX9 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Usp39Q3TIX9 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
Usp39Q3TIX9 Gm24126-201ENSMUST00000104111 106 ntBASIC2.31□□□□□ -2.04
Usp39Q3TIX9 Gm13885-201ENSMUST00000117569 187 ntBASIC2.31□□□□□ -2.04
Usp39Q3TIX9 Gm14502-201ENSMUST00000118154 113 ntBASIC2.31□□□□□ -2.04
Usp39Q3TIX9 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC2.31□□□□□ -2.04
Usp39Q3TIX9 Gm23043-201ENSMUST00000157890 109 ntBASIC2.31□□□□□ -2.04
Usp39Q3TIX9 Gm24877-201ENSMUST00000158779 116 ntBASIC2.31□□□□□ -2.04
Usp39Q3TIX9 Gm25642-201ENSMUST00000175137 66 ntBASIC2.31□□□□□ -2.04
Usp39Q3TIX9 Gm27792-201ENSMUST00000184031 115 ntBASIC2.31□□□□□ -2.04
Usp39Q3TIX9 Gm37377-201ENSMUST00000191733 304 ntBASIC2.31□□□□□ -2.04
Usp39Q3TIX9 Gm43722-201ENSMUST00000196054 124 ntBASIC2.31□□□□□ -2.04
Usp39Q3TIX9 Gm45288-201ENSMUST00000210236 151 ntBASIC2.31□□□□□ -2.04
Usp39Q3TIX9 CT033781.2-201ENSMUST00000221113 153 ntBASIC2.31□□□□□ -2.04
Usp39Q3TIX9 Gm22055-201ENSMUST00000083388 107 ntBASIC2.31□□□□□ -2.04
Usp39Q3TIX9 Gm25628-201ENSMUST00000084002 105 ntBASIC2.31□□□□□ -2.04
Usp39Q3TIX9 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Usp39Q3TIX9 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC2.3□□□□□ -2.04
Usp39Q3TIX9 Mir669d-201ENSMUST00000104644 121 ntBASIC2.3□□□□□ -2.04
Usp39Q3TIX9 Gm23551-201ENSMUST00000116852 121 ntBASIC2.3□□□□□ -2.04
Usp39Q3TIX9 Gm22221-201ENSMUST00000157362 103 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 136.2 ms