Protein–RNA interactions for Protein: Q1W617

Shroom4, Protein Shroom4, mousemouse

Predictions only

Length 1,475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom4Q1W617 Gm26434-201ENSMUST00000179778 79 ntBASIC2.71□□□□□ -1.98
Shroom4Q1W617 Gm25741-201ENSMUST00000179825 79 ntBASIC2.71□□□□□ -1.98
Shroom4Q1W617 Gm24759-201ENSMUST00000179827 79 ntBASIC2.71□□□□□ -1.98
Shroom4Q1W617 Gm24219-201ENSMUST00000179861 79 ntBASIC2.71□□□□□ -1.98
Shroom4Q1W617 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC2.71□□□□□ -1.98
Shroom4Q1W617 Gm45522-201ENSMUST00000210784 166 ntBASIC2.71□□□□□ -1.98
Shroom4Q1W617 Gm23254-201ENSMUST00000097244 79 ntBASIC2.71□□□□□ -1.98
Shroom4Q1W617 Gm22679-201ENSMUST00000116975 100 ntBASIC2.7□□□□□ -1.98
Shroom4Q1W617 Gm23536-201ENSMUST00000157541 134 ntBASIC2.7□□□□□ -1.98
Shroom4Q1W617 Gm26414-201ENSMUST00000157674 269 ntBASIC2.7□□□□□ -1.98
Shroom4Q1W617 Gm5967-201ENSMUST00000172723 494 ntBASIC2.7□□□□□ -1.98
Shroom4Q1W617 Mir8106-201ENSMUST00000184520 139 ntBASIC2.7□□□□□ -1.98
Shroom4Q1W617 Gm44458-201ENSMUST00000196594 143 ntBASIC2.7□□□□□ -1.98
Shroom4Q1W617 Gm42774-201ENSMUST00000198854 283 ntBASIC2.7□□□□□ -1.98
Shroom4Q1W617 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC2.7□□□□□ -1.98
Shroom4Q1W617 Gm19563-201ENSMUST00000222031 270 ntBASIC2.7□□□□□ -1.98
Shroom4Q1W617 Mdga2-203ENSMUST00000113942 423 ntBASIC2.69□□□□□ -1.98
Shroom4Q1W617 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC2.69□□□□□ -1.98
Shroom4Q1W617 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC2.69□□□□□ -1.98
Shroom4Q1W617 Gm43563-201ENSMUST00000196761 198 ntBASIC2.69□□□□□ -1.98
Shroom4Q1W617 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.69□□□□□ -1.98
Shroom4Q1W617 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC2.69□□□□□ -1.98
Shroom4Q1W617 CU062626.2-201ENSMUST00000223953 274 ntBASIC2.69□□□□□ -1.98
Shroom4Q1W617 AC100209.2-201ENSMUST00000224461 451 ntBASIC2.69□□□□□ -1.98
Shroom4Q1W617 Gm25411-201ENSMUST00000083760 151 ntBASIC2.69□□□□□ -1.98
Shroom4Q1W617 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Shroom4Q1W617 Gm16186-201ENSMUST00000120132 216 ntBASIC2.68□□□□□ -1.98
Shroom4Q1W617 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC2.68□□□□□ -1.98
Shroom4Q1W617 Gm23641-201ENSMUST00000157857 101 ntBASIC2.68□□□□□ -1.98
Shroom4Q1W617 Mir5136-201ENSMUST00000175573 76 ntBASIC2.68□□□□□ -1.98
Shroom4Q1W617 Gm25646-201ENSMUST00000178527 79 ntBASIC2.68□□□□□ -1.98
Shroom4Q1W617 Gm23303-201ENSMUST00000082714 152 ntBASIC2.68□□□□□ -1.98
Shroom4Q1W617 Gm23042-201ENSMUST00000083866 101 ntBASIC2.68□□□□□ -1.98
Shroom4Q1W617 Mir488-201ENSMUST00000093595 109 ntBASIC2.68□□□□□ -1.98
Shroom4Q1W617 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Shroom4Q1W617 Mir872-201ENSMUST00000104728 81 ntBASIC2.67□□□□□ -1.98
Shroom4Q1W617 Gm25220-201ENSMUST00000157546 95 ntBASIC2.67□□□□□ -1.98
Shroom4Q1W617 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC2.67□□□□□ -1.98
Shroom4Q1W617 Gm43206-201ENSMUST00000197990 114 ntBASIC2.67□□□□□ -1.98
Shroom4Q1W617 AC160550.3-201ENSMUST00000226818 400 ntBASIC2.67□□□□□ -1.98
Shroom4Q1W617 Gm25634-201ENSMUST00000082667 105 ntBASIC2.67□□□□□ -1.98
Shroom4Q1W617 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.67□□□□□ -1.98
Shroom4Q1W617 Gm42862-201ENSMUST00000197494 2621 ntBASIC2.67□□□□□ -1.98
Shroom4Q1W617 Gm26421-201ENSMUST00000104279 132 ntBASIC2.66□□□□□ -1.98
Shroom4Q1W617 Gm24174-201ENSMUST00000158933 111 ntBASIC2.66□□□□□ -1.98
Shroom4Q1W617 Gm28848-201ENSMUST00000189984 168 ntBASIC2.66□□□□□ -1.98
Shroom4Q1W617 Mir7657-201ENSMUST00000196051 57 ntBASIC2.66□□□□□ -1.98
Shroom4Q1W617 Gm44337-201ENSMUST00000196553 114 ntBASIC2.66□□□□□ -1.98
Shroom4Q1W617 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Shroom4Q1W617 Gm43955-201ENSMUST00000204332 142 ntBASIC2.66□□□□□ -1.98
Shroom4Q1W617 Gm24356-201ENSMUST00000082859 106 ntBASIC2.66□□□□□ -1.98
Shroom4Q1W617 Gm24929-201ENSMUST00000083403 139 ntBASIC2.66□□□□□ -1.98
Shroom4Q1W617 Gm24164-201ENSMUST00000093663 104 ntBASIC2.66□□□□□ -1.98
Shroom4Q1W617 Gm14400-201ENSMUST00000117234 2135 ntBASIC2.66□□□□□ -1.98
Shroom4Q1W617 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
Shroom4Q1W617 Snord90-201ENSMUST00000104568 111 ntBASIC2.65□□□□□ -1.98
Shroom4Q1W617 Mir1b-201ENSMUST00000117012 122 ntBASIC2.65□□□□□ -1.98
Shroom4Q1W617 Gm15067-201ENSMUST00000119534 156 ntBASIC2.65□□□□□ -1.98
Shroom4Q1W617 Gm22490-201ENSMUST00000157188 119 ntBASIC2.65□□□□□ -1.98
Shroom4Q1W617 Gm23331-201ENSMUST00000157423 108 ntBASIC2.65□□□□□ -1.98
Shroom4Q1W617 Scarna3b-201ENSMUST00000157533 139 ntBASIC2.65□□□□□ -1.98
Shroom4Q1W617 Gm23196-201ENSMUST00000158806 107 ntBASIC2.65□□□□□ -1.98
Shroom4Q1W617 Gm25161-201ENSMUST00000158913 132 ntBASIC2.65□□□□□ -1.98
Shroom4Q1W617 Mir7052-201ENSMUST00000184821 65 ntBASIC2.65□□□□□ -1.98
Shroom4Q1W617 Gm45687-201ENSMUST00000209454 155 ntBASIC2.65□□□□□ -1.98
Shroom4Q1W617 Mir29b-2-201ENSMUST00000083478 81 ntBASIC2.65□□□□□ -1.98
Shroom4Q1W617 Gm25753-201ENSMUST00000116792 121 ntBASIC2.65□□□□□ -1.99
Shroom4Q1W617 Gm25253-201ENSMUST00000179958 107 ntBASIC2.65□□□□□ -1.99
Shroom4Q1W617 Mir7059-201ENSMUST00000184825 59 ntBASIC2.65□□□□□ -1.99
Shroom4Q1W617 Gm37545-201ENSMUST00000186512 148 ntBASIC2.65□□□□□ -1.99
Shroom4Q1W617 Gm43324-201ENSMUST00000197482 289 ntBASIC2.65□□□□□ -1.99
Shroom4Q1W617 Gm43993-201ENSMUST00000203972 247 ntBASIC2.65□□□□□ -1.99
Shroom4Q1W617 Gm24461-201ENSMUST00000082735 103 ntBASIC2.65□□□□□ -1.99
Shroom4Q1W617 Gm23462-201ENSMUST00000083264 104 ntBASIC2.65□□□□□ -1.99
Shroom4Q1W617 Gm37941-201ENSMUST00000192170 2309 ntBASIC2.64□□□□□ -1.99
Shroom4Q1W617 Gm24282-201ENSMUST00000104232 66 ntBASIC2.64□□□□□ -1.99
Shroom4Q1W617 Gm33866-201ENSMUST00000196911 289 ntBASIC2.64□□□□□ -1.99
Shroom4Q1W617 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC2.64□□□□□ -1.99
Shroom4Q1W617 Gm43199-201ENSMUST00000200019 307 ntBASIC2.64□□□□□ -1.99
Shroom4Q1W617 Gm42506-201ENSMUST00000202009 150 ntBASIC2.64□□□□□ -1.99
Shroom4Q1W617 Gm5010-201ENSMUST00000213131 260 ntBASIC2.64□□□□□ -1.99
Shroom4Q1W617 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Shroom4Q1W617 Gm42635-201ENSMUST00000200266 2571 ntBASIC2.63□□□□□ -1.99
Shroom4Q1W617 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Shroom4Q1W617 Gm25787-201ENSMUST00000104709 92 ntBASIC2.63□□□□□ -1.99
Shroom4Q1W617 Gm22051-201ENSMUST00000117002 127 ntBASIC2.63□□□□□ -1.99
Shroom4Q1W617 Gm23886-201ENSMUST00000122684 313 ntBASIC2.63□□□□□ -1.99
Shroom4Q1W617 Gm26200-201ENSMUST00000180273 79 ntBASIC2.63□□□□□ -1.99
Shroom4Q1W617 Gm37923-201ENSMUST00000191624 161 ntBASIC2.63□□□□□ -1.99
Shroom4Q1W617 Mir3969-201ENSMUST00000197106 92 ntBASIC2.63□□□□□ -1.99
Shroom4Q1W617 Gm18982-201ENSMUST00000198118 529 ntBASIC2.63□□□□□ -1.99
Shroom4Q1W617 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
Shroom4Q1W617 CT009696.1-201ENSMUST00000215745 256 ntBASIC2.63□□□□□ -1.99
Shroom4Q1W617 Gm40810-201ENSMUST00000219149 253 ntBASIC2.63□□□□□ -1.99
Shroom4Q1W617 Gm23244-201ENSMUST00000083375 92 ntBASIC2.63□□□□□ -1.99
Shroom4Q1W617 Gm25257-201ENSMUST00000083907 110 ntBASIC2.63□□□□□ -1.99
Shroom4Q1W617 Gm23492-201ENSMUST00000116837 115 ntBASIC2.62□□□□□ -1.99
Shroom4Q1W617 Gm12143-201ENSMUST00000119666 332 ntBASIC2.62□□□□□ -1.99
Shroom4Q1W617 Gm24726-201ENSMUST00000158232 121 ntBASIC2.62□□□□□ -1.99
Shroom4Q1W617 Gm24572-201ENSMUST00000175505 88 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms