Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC2.4□□□□□ -2.02
Col8a1Q00780 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Col8a1Q00780 Mir547-201ENSMUST00000102051 78 ntBASIC2.4□□□□□ -2.03
Col8a1Q00780 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Col8a1Q00780 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC2.4□□□□□ -2.03
Col8a1Q00780 Gm22079-201ENSMUST00000157592 106 ntBASIC2.4□□□□□ -2.03
Col8a1Q00780 Snord11-201ENSMUST00000158468 84 ntBASIC2.4□□□□□ -2.03
Col8a1Q00780 Mir6402-201ENSMUST00000183406 80 ntBASIC2.4□□□□□ -2.03
Col8a1Q00780 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC2.4□□□□□ -2.03
Col8a1Q00780 Gm44024-201ENSMUST00000203008 476 ntBASIC2.4□□□□□ -2.03
Col8a1Q00780 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.4□□□□□ -2.03
Col8a1Q00780 Gm25130-201ENSMUST00000082650 156 ntBASIC2.4□□□□□ -2.03
Col8a1Q00780 Mir7-1-201ENSMUST00000083500 108 ntBASIC2.4□□□□□ -2.03
Col8a1Q00780 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC2.4□□□□□ -2.03
Col8a1Q00780 Gm42635-201ENSMUST00000200266 2571 ntBASIC2.4□□□□□ -2.03
Col8a1Q00780 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Col8a1Q00780 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
Col8a1Q00780 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Col8a1Q00780 Gm26341-201ENSMUST00000104561 134 ntBASIC2.39□□□□□ -2.03
Col8a1Q00780 Gm23551-201ENSMUST00000116852 121 ntBASIC2.39□□□□□ -2.03
Col8a1Q00780 Gm22221-201ENSMUST00000157362 103 ntBASIC2.39□□□□□ -2.03
Col8a1Q00780 Gm22961-201ENSMUST00000157964 106 ntBASIC2.39□□□□□ -2.03
Col8a1Q00780 Gm25978-201ENSMUST00000158698 90 ntBASIC2.39□□□□□ -2.03
Col8a1Q00780 Gm24510-201ENSMUST00000174965 94 ntBASIC2.39□□□□□ -2.03
Col8a1Q00780 Gm8034-201ENSMUST00000178853 132 ntBASIC2.39□□□□□ -2.03
Col8a1Q00780 Mir3569-201ENSMUST00000185080 58 ntBASIC2.39□□□□□ -2.03
Col8a1Q00780 Gm29658-201ENSMUST00000185404 230 ntBASIC2.39□□□□□ -2.03
Col8a1Q00780 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.39□□□□□ -2.03
Col8a1Q00780 Gm25513-201ENSMUST00000083861 162 ntBASIC2.39□□□□□ -2.03
Col8a1Q00780 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Col8a1Q00780 BC022960-201ENSMUST00000119987 1815 ntBASIC2.39□□□□□ -2.03
Col8a1Q00780 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Col8a1Q00780 Mir374b-201ENSMUST00000102314 95 ntBASIC2.38□□□□□ -2.03
Col8a1Q00780 Gm23015-201ENSMUST00000104145 128 ntBASIC2.38□□□□□ -2.03
Col8a1Q00780 Gm26015-201ENSMUST00000104402 125 ntBASIC2.38□□□□□ -2.03
Col8a1Q00780 Gm15069-201ENSMUST00000117792 192 ntBASIC2.38□□□□□ -2.03
Col8a1Q00780 Gm15068-201ENSMUST00000119796 192 ntBASIC2.38□□□□□ -2.03
Col8a1Q00780 Gm13246-201ENSMUST00000120994 315 ntBASIC2.38□□□□□ -2.03
Col8a1Q00780 Gm22451-201ENSMUST00000122803 151 ntBASIC2.38□□□□□ -2.03
Col8a1Q00780 Gm23470-201ENSMUST00000157129 120 ntBASIC2.38□□□□□ -2.03
Col8a1Q00780 Gm22729-201ENSMUST00000158088 129 ntBASIC2.38□□□□□ -2.03
Col8a1Q00780 Mir1927-201ENSMUST00000158579 109 ntBASIC2.38□□□□□ -2.03
Col8a1Q00780 Gm26498-201ENSMUST00000177799 79 ntBASIC2.38□□□□□ -2.03
Col8a1Q00780 Gm26230-201ENSMUST00000180141 79 ntBASIC2.38□□□□□ -2.03
Col8a1Q00780 Gm27527-201ENSMUST00000183903 99 ntBASIC2.38□□□□□ -2.03
Col8a1Q00780 Gm43901-201ENSMUST00000203247 453 ntBASIC2.38□□□□□ -2.03
Col8a1Q00780 Gm43889-201ENSMUST00000203950 3681 ntBASIC2.38□□□□□ -2.03
Col8a1Q00780 Gm45456-201ENSMUST00000210841 243 ntBASIC2.38□□□□□ -2.03
Col8a1Q00780 Gm26126-201ENSMUST00000083188 164 ntBASIC2.38□□□□□ -2.03
Col8a1Q00780 Gm24615-201ENSMUST00000083268 113 ntBASIC2.38□□□□□ -2.03
Col8a1Q00780 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC2.38□□□□□ -2.03
Col8a1Q00780 Gm26175-201ENSMUST00000083794 131 ntBASIC2.38□□□□□ -2.03
Col8a1Q00780 Gm43706-201ENSMUST00000198767 2652 ntBASIC2.38□□□□□ -2.03
Col8a1Q00780 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC2.38□□□□□ -2.03
Col8a1Q00780 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Col8a1Q00780 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.37□□□□□ -2.03
Col8a1Q00780 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Col8a1Q00780 Gm23951-201ENSMUST00000104029 132 ntBASIC2.37□□□□□ -2.03
Col8a1Q00780 Gm24375-201ENSMUST00000104397 132 ntBASIC2.37□□□□□ -2.03
Col8a1Q00780 Gm24468-201ENSMUST00000104489 104 ntBASIC2.37□□□□□ -2.03
Col8a1Q00780 Gm15536-201ENSMUST00000121411 114 ntBASIC2.37□□□□□ -2.03
Col8a1Q00780 Gm26253-201ENSMUST00000122493 103 ntBASIC2.37□□□□□ -2.03
Col8a1Q00780 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC2.37□□□□□ -2.03
Col8a1Q00780 Gm22228-201ENSMUST00000157364 101 ntBASIC2.37□□□□□ -2.03
Col8a1Q00780 Gm25888-201ENSMUST00000157778 302 ntBASIC2.37□□□□□ -2.03
Col8a1Q00780 Gm23858-201ENSMUST00000158384 106 ntBASIC2.37□□□□□ -2.03
Col8a1Q00780 Gm22858-201ENSMUST00000174972 76 ntBASIC2.37□□□□□ -2.03
Col8a1Q00780 Gm26864-201ENSMUST00000181346 156 ntBASIC2.37□□□□□ -2.03
Col8a1Q00780 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.37□□□□□ -2.03
Col8a1Q00780 Gm44666-201ENSMUST00000208544 391 ntBASIC2.37□□□□□ -2.03
Col8a1Q00780 n-R5s183-201ENSMUST00000083939 115 ntBASIC2.37□□□□□ -2.03
Col8a1Q00780 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Col8a1Q00780 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Col8a1Q00780 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Col8a1Q00780 Gm26074-201ENSMUST00000104063 129 ntBASIC2.36□□□□□ -2.03
Col8a1Q00780 Mir878-201ENSMUST00000104680 78 ntBASIC2.36□□□□□ -2.03
Col8a1Q00780 Gm13885-201ENSMUST00000117569 187 ntBASIC2.36□□□□□ -2.03
Col8a1Q00780 Gm11356-201ENSMUST00000118974 192 ntBASIC2.36□□□□□ -2.03
Col8a1Q00780 Gm14843-201ENSMUST00000119596 212 ntBASIC2.36□□□□□ -2.03
Col8a1Q00780 Gm23325-201ENSMUST00000157422 129 ntBASIC2.36□□□□□ -2.03
Col8a1Q00780 Gm24559-201ENSMUST00000157519 121 ntBASIC2.36□□□□□ -2.03
Col8a1Q00780 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Col8a1Q00780 Gm22853-201ENSMUST00000174974 131 ntBASIC2.36□□□□□ -2.03
Col8a1Q00780 Gm22264-201ENSMUST00000178200 107 ntBASIC2.36□□□□□ -2.03
Col8a1Q00780 Gm28270-201ENSMUST00000188550 109 ntBASIC2.36□□□□□ -2.03
Col8a1Q00780 Gm28328-201ENSMUST00000188869 109 ntBASIC2.36□□□□□ -2.03
Col8a1Q00780 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.36□□□□□ -2.03
Col8a1Q00780 AL603834.1-201ENSMUST00000198372 121 ntBASIC2.36□□□□□ -2.03
Col8a1Q00780 Mir155-201ENSMUST00000083463 65 ntBASIC2.36□□□□□ -2.03
Col8a1Q00780 Gm33962-201ENSMUST00000182643 2592 ntBASIC2.36□□□□□ -2.03
Col8a1Q00780 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Col8a1Q00780 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Col8a1Q00780 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
Col8a1Q00780 n-R5s158-201ENSMUST00000104095 118 ntBASIC2.35□□□□□ -2.03
Col8a1Q00780 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Col8a1Q00780 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC2.35□□□□□ -2.03
Col8a1Q00780 Gm25476-201ENSMUST00000175125 185 ntBASIC2.35□□□□□ -2.03
Col8a1Q00780 Gm24573-201ENSMUST00000175499 112 ntBASIC2.35□□□□□ -2.03
Col8a1Q00780 Gm24390-201ENSMUST00000179578 62 ntBASIC2.35□□□□□ -2.03
Col8a1Q00780 Gm27959-201ENSMUST00000185172 111 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 218.7 ms