Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm23390-201ENSMUST00000157393 106 ntBASIC2.59□□□□□ -1.99
SgcbP82349 Gm23380-201ENSMUST00000158448 103 ntBASIC2.59□□□□□ -1.99
SgcbP82349 Gm22429-201ENSMUST00000158553 130 ntBASIC2.59□□□□□ -1.99
SgcbP82349 Gm28358-202ENSMUST00000189292 223 ntBASIC2.59□□□□□ -1.99
SgcbP82349 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC2.59□□□□□ -1.99
SgcbP82349 AC167721.1-201ENSMUST00000217088 279 ntBASIC2.59□□□□□ -1.99
SgcbP82349 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC2.59□□□□□ -1.99
SgcbP82349 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC2.59□□□□□ -1.99
SgcbP82349 Gm25357-201ENSMUST00000082745 72 ntBASIC2.59□□□□□ -1.99
SgcbP82349 Gm15697-201ENSMUST00000121946 2902 ntBASIC2.58□□□□□ -2
SgcbP82349 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.58□□□□□ -2
SgcbP82349 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SgcbP82349 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
SgcbP82349 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC2.58□□□□□ -2
SgcbP82349 Gm25476-201ENSMUST00000175125 185 ntBASIC2.58□□□□□ -2
SgcbP82349 Gm23738-201ENSMUST00000082828 171 ntBASIC2.58□□□□□ -2
SgcbP82349 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC2.58□□□□□ -2
SgcbP82349 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
SgcbP82349 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
SgcbP82349 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SgcbP82349 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.57□□□□□ -2
SgcbP82349 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.57□□□□□ -2
SgcbP82349 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.57□□□□□ -2
SgcbP82349 Gm24068-201ENSMUST00000104513 132 ntBASIC2.57□□□□□ -2
SgcbP82349 Gm22196-201ENSMUST00000116865 109 ntBASIC2.57□□□□□ -2
SgcbP82349 Gm23268-201ENSMUST00000175494 78 ntBASIC2.57□□□□□ -2
SgcbP82349 Mir5123-201ENSMUST00000177794 83 ntBASIC2.57□□□□□ -2
SgcbP82349 Gm27379-201ENSMUST00000183730 123 ntBASIC2.57□□□□□ -2
SgcbP82349 Gm24350-202ENSMUST00000198309 132 ntBASIC2.57□□□□□ -2
SgcbP82349 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC2.57□□□□□ -2
SgcbP82349 Gm22683-201ENSMUST00000082854 137 ntBASIC2.57□□□□□ -2
SgcbP82349 Gm23249-201ENSMUST00000083369 161 ntBASIC2.57□□□□□ -2
SgcbP82349 Gm43032-201ENSMUST00000197967 3123 ntBASIC2.57□□□□□ -2
SgcbP82349 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SgcbP82349 Gm22031-201ENSMUST00000116945 126 ntBASIC2.56□□□□□ -2
SgcbP82349 Gm22322-201ENSMUST00000157151 111 ntBASIC2.56□□□□□ -2
SgcbP82349 Gm23325-201ENSMUST00000157422 129 ntBASIC2.56□□□□□ -2
SgcbP82349 Gm26498-201ENSMUST00000177799 79 ntBASIC2.56□□□□□ -2
SgcbP82349 Gm26230-201ENSMUST00000180141 79 ntBASIC2.56□□□□□ -2
SgcbP82349 Gm27700-201ENSMUST00000185003 81 ntBASIC2.56□□□□□ -2
SgcbP82349 Gm44932-201ENSMUST00000206799 121 ntBASIC2.56□□□□□ -2
SgcbP82349 Gm19855-201ENSMUST00000210145 249 ntBASIC2.56□□□□□ -2
SgcbP82349 Gm45544-201ENSMUST00000211130 88 ntBASIC2.56□□□□□ -2
SgcbP82349 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC2.56□□□□□ -2
SgcbP82349 Gm25697-201ENSMUST00000082902 98 ntBASIC2.56□□□□□ -2
SgcbP82349 Gm23244-201ENSMUST00000083375 92 ntBASIC2.56□□□□□ -2
SgcbP82349 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SgcbP82349 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
SgcbP82349 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC2.56□□□□□ -2
SgcbP82349 Gm15302-201ENSMUST00000117779 2630 ntBASIC2.55□□□□□ -2
SgcbP82349 Gm23654-201ENSMUST00000116758 126 ntBASIC2.55□□□□□ -2
SgcbP82349 Trav5d-3-201ENSMUST00000170041 270 ntBASIC2.55□□□□□ -2
SgcbP82349 Mir3094-201ENSMUST00000175121 64 ntBASIC2.55□□□□□ -2
SgcbP82349 Mir6928-201ENSMUST00000185166 70 ntBASIC2.55□□□□□ -2
SgcbP82349 AC159885.1-201ENSMUST00000222221 199 ntBASIC2.55□□□□□ -2
SgcbP82349 Gm25628-201ENSMUST00000084002 105 ntBASIC2.55□□□□□ -2
SgcbP82349 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SgcbP82349 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC2.55□□□□□ -2
SgcbP82349 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.54□□□□□ -2
SgcbP82349 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC2.54□□□□□ -2
SgcbP82349 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC2.54□□□□□ -2
SgcbP82349 Gm23716-201ENSMUST00000157348 144 ntBASIC2.54□□□□□ -2
SgcbP82349 Gm17117-201ENSMUST00000163665 299 ntBASIC2.54□□□□□ -2
SgcbP82349 Mir6916-201ENSMUST00000184514 63 ntBASIC2.54□□□□□ -2
SgcbP82349 Sult1c2-ps2-201ENSMUST00000196414 276 ntBASIC2.54□□□□□ -2
SgcbP82349 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC2.54□□□□□ -2
SgcbP82349 AC124537.1-201ENSMUST00000222890 159 ntBASIC2.54□□□□□ -2
SgcbP82349 Gm22283-201ENSMUST00000082556 161 ntBASIC2.54□□□□□ -2
SgcbP82349 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
SgcbP82349 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC2.54□□□□□ -2
SgcbP82349 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
SgcbP82349 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.54□□□□□ -2
SgcbP82349 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.53□□□□□ -2
SgcbP82349 Gm43379-201ENSMUST00000196253 7726 ntBASIC2.53□□□□□ -2
SgcbP82349 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SgcbP82349 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
SgcbP82349 Gm26421-201ENSMUST00000104279 132 ntBASIC2.53□□□□□ -2
SgcbP82349 Gm11414-201ENSMUST00000121795 263 ntBASIC2.53□□□□□ -2
SgcbP82349 Gm26214-201ENSMUST00000158581 107 ntBASIC2.53□□□□□ -2
SgcbP82349 Gm24345-201ENSMUST00000158706 124 ntBASIC2.53□□□□□ -2
SgcbP82349 Gm24572-201ENSMUST00000175505 88 ntBASIC2.53□□□□□ -2
SgcbP82349 Gm27446-201ENSMUST00000183963 89 ntBASIC2.53□□□□□ -2
SgcbP82349 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC2.53□□□□□ -2
SgcbP82349 AC133517.1-203ENSMUST00000225570 390 ntBASIC2.53□□□□□ -2
SgcbP82349 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
SgcbP82349 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.53□□□□□ -2
SgcbP82349 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC2.53□□□□□ -2
SgcbP82349 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
SgcbP82349 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
SgcbP82349 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC2.52□□□□□ -2.01
SgcbP82349 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
SgcbP82349 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.52□□□□□ -2.01
SgcbP82349 Gm23911-201ENSMUST00000104596 134 ntBASIC2.52□□□□□ -2.01
SgcbP82349 Gm24250-201ENSMUST00000157320 135 ntBASIC2.52□□□□□ -2.01
SgcbP82349 Gm24668-201ENSMUST00000158935 104 ntBASIC2.52□□□□□ -2.01
SgcbP82349 Gm16584-201ENSMUST00000159267 189 ntBASIC2.52□□□□□ -2.01
SgcbP82349 Gm23770-201ENSMUST00000178009 108 ntBASIC2.52□□□□□ -2.01
SgcbP82349 Gm22832-201ENSMUST00000178022 108 ntBASIC2.52□□□□□ -2.01
SgcbP82349 Gm23863-201ENSMUST00000178265 108 ntBASIC2.52□□□□□ -2.01
SgcbP82349 Gm24828-201ENSMUST00000178507 108 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 222.7 ms