Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Gm23660-201ENSMUST00000178362 79 ntBASIC0.43□□□□□ -2.34
Shox2P70390 Gm24088-201ENSMUST00000179100 79 ntBASIC0.43□□□□□ -2.34
Shox2P70390 Gm25284-201ENSMUST00000180345 141 ntBASIC0.43□□□□□ -2.34
Shox2P70390 Gm25579-201ENSMUST00000083407 106 ntBASIC0.43□□□□□ -2.34
Shox2P70390 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC0.43□□□□□ -2.34
Shox2P70390 Gm22656-201ENSMUST00000104199 171 ntBASIC0.42□□□□□ -2.34
Shox2P70390 Gm25434-201ENSMUST00000158278 167 ntBASIC0.42□□□□□ -2.34
Shox2P70390 Mir1961-201ENSMUST00000158643 112 ntBASIC0.42□□□□□ -2.34
Shox2P70390 Gm24549-201ENSMUST00000158647 139 ntBASIC0.42□□□□□ -2.34
Shox2P70390 Gm23191-201ENSMUST00000179147 107 ntBASIC0.42□□□□□ -2.34
Shox2P70390 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC0.42□□□□□ -2.34
Shox2P70390 Gm45543-201ENSMUST00000209327 88 ntBASIC0.42□□□□□ -2.34
Shox2P70390 AC154484.1-201ENSMUST00000227311 771 ntBASIC0.42□□□□□ -2.34
Shox2P70390 Mir34a-201ENSMUST00000083559 102 ntBASIC0.42□□□□□ -2.34
Shox2P70390 Gm26164-201ENSMUST00000083793 104 ntBASIC0.42□□□□□ -2.34
Shox2P70390 Mup-ps22-201ENSMUST00000121611 243 ntBASIC0.41□□□□□ -2.34
Shox2P70390 Gm25052-201ENSMUST00000122661 158 ntBASIC0.41□□□□□ -2.34
Shox2P70390 Gm25909-201ENSMUST00000157619 121 ntBASIC0.41□□□□□ -2.34
Shox2P70390 Gm26393-201ENSMUST00000157625 129 ntBASIC0.41□□□□□ -2.34
Shox2P70390 Gm24853-201ENSMUST00000158026 121 ntBASIC0.41□□□□□ -2.34
Shox2P70390 Gm22888-201ENSMUST00000158640 77 ntBASIC0.41□□□□□ -2.34
Shox2P70390 Gm22914-201ENSMUST00000175195 77 ntBASIC0.41□□□□□ -2.34
Shox2P70390 Mir3079-201ENSMUST00000175428 90 ntBASIC0.41□□□□□ -2.34
Shox2P70390 Gm20257-202ENSMUST00000188643 130 ntBASIC0.41□□□□□ -2.34
Shox2P70390 CT485612.2-201ENSMUST00000223014 151 ntBASIC0.41□□□□□ -2.34
Shox2P70390 Mir654-201ENSMUST00000104787 84 ntBASIC0.4□□□□□ -2.35
Shox2P70390 Gm26484-201ENSMUST00000158018 106 ntBASIC0.4□□□□□ -2.35
Shox2P70390 Gm20409-201ENSMUST00000173457 130 ntBASIC0.4□□□□□ -2.35
Shox2P70390 Gm26180-201ENSMUST00000179942 107 ntBASIC0.4□□□□□ -2.35
Shox2P70390 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC0.4□□□□□ -2.35
Shox2P70390 Gm27410-201ENSMUST00000183851 115 ntBASIC0.4□□□□□ -2.35
Shox2P70390 Mir6915-201ENSMUST00000198839 69 ntBASIC0.4□□□□□ -2.35
Shox2P70390 Gm44828-201ENSMUST00000203745 106 ntBASIC0.4□□□□□ -2.35
Shox2P70390 Gm5023-201ENSMUST00000217442 587 ntBASIC0.4□□□□□ -2.35
Shox2P70390 AC110380.1-201ENSMUST00000226987 389 ntBASIC0.4□□□□□ -2.35
Shox2P70390 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
Shox2P70390 Mir32-201ENSMUST00000083610 70 ntBASIC0.4□□□□□ -2.35
Shox2P70390 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
Shox2P70390 Mir767-201ENSMUST00000103256 107 ntBASIC0.39□□□□□ -2.35
Shox2P70390 Mir880-201ENSMUST00000104809 78 ntBASIC0.39□□□□□ -2.35
Shox2P70390 Gm13341-201ENSMUST00000120780 672 ntBASIC0.39□□□□□ -2.35
Shox2P70390 Gm22962-201ENSMUST00000157962 73 ntBASIC0.39□□□□□ -2.35
Shox2P70390 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC0.39□□□□□ -2.35
Shox2P70390 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC0.39□□□□□ -2.35
Shox2P70390 AC102369.1-201ENSMUST00000218415 373 ntBASIC0.39□□□□□ -2.35
Shox2P70390 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.39□□□□□ -2.35
Shox2P70390 Gm24037-201ENSMUST00000082871 180 ntBASIC0.39□□□□□ -2.35
Shox2P70390 Mir710-201ENSMUST00000102088 110 ntBASIC0.38□□□□□ -2.35
Shox2P70390 Gm22759-201ENSMUST00000102276 96 ntBASIC0.38□□□□□ -2.35
Shox2P70390 Gm24283-201ENSMUST00000104233 107 ntBASIC0.38□□□□□ -2.35
Shox2P70390 Gm14761-201ENSMUST00000121363 262 ntBASIC0.38□□□□□ -2.35
Shox2P70390 Gm22199-201ENSMUST00000122660 126 ntBASIC0.38□□□□□ -2.35
Shox2P70390 Mir1931-201ENSMUST00000158589 119 ntBASIC0.38□□□□□ -2.35
Shox2P70390 Gm22200-201ENSMUST00000158614 67 ntBASIC0.38□□□□□ -2.35
Shox2P70390 Gm26116-201ENSMUST00000175600 77 ntBASIC0.38□□□□□ -2.35
Shox2P70390 Gm9227-201ENSMUST00000194733 566 ntBASIC0.38□□□□□ -2.35
Shox2P70390 Mir468-201ENSMUST00000197332 78 ntBASIC0.38□□□□□ -2.35
Shox2P70390 Gm44473-201ENSMUST00000204039 152 ntBASIC0.38□□□□□ -2.35
Shox2P70390 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC0.38□□□□□ -2.35
Shox2P70390 AC166358.10-201ENSMUST00000220556 144 ntBASIC0.38□□□□□ -2.35
Shox2P70390 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC0.37□□□□□ -2.35
Shox2P70390 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC0.37□□□□□ -2.35
Shox2P70390 Gm20391-201ENSMUST00000174722 106 ntBASIC0.37□□□□□ -2.35
Shox2P70390 Ighv15-1-201ENSMUST00000194450 276 ntBASIC0.37□□□□□ -2.35
Shox2P70390 AC165092.3-201ENSMUST00000223602 282 ntBASIC0.37□□□□□ -2.35
Shox2P70390 Gm22809-201ENSMUST00000082743 156 ntBASIC0.37□□□□□ -2.35
Shox2P70390 Gm25414-201ENSMUST00000101814 107 ntBASIC0.36□□□□□ -2.35
Shox2P70390 Mir574-201ENSMUST00000103854 78 ntBASIC0.36□□□□□ -2.35
Shox2P70390 Gm11798-201ENSMUST00000119150 421 ntBASIC0.36□□□□□ -2.35
Shox2P70390 Gm14884-201ENSMUST00000120456 196 ntBASIC0.36□□□□□ -2.35
Shox2P70390 Gm23672-201ENSMUST00000157471 107 ntBASIC0.36□□□□□ -2.35
Shox2P70390 Gm25643-201ENSMUST00000158874 103 ntBASIC0.36□□□□□ -2.35
Shox2P70390 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
Shox2P70390 Gm27755-201ENSMUST00000184623 132 ntBASIC0.36□□□□□ -2.35
Shox2P70390 Gm27540-201ENSMUST00000184950 187 ntBASIC0.36□□□□□ -2.35
Shox2P70390 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC0.36□□□□□ -2.35
Shox2P70390 AC166358.7-201ENSMUST00000221132 108 ntBASIC0.36□□□□□ -2.35
Shox2P70390 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.36□□□□□ -2.35
Shox2P70390 AC125543.5-201ENSMUST00000222799 108 ntBASIC0.36□□□□□ -2.35
Shox2P70390 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.36□□□□□ -2.35
Shox2P70390 Snord49b-201ENSMUST00000082503 72 ntBASIC0.36□□□□□ -2.35
Shox2P70390 Gm24372-201ENSMUST00000104400 110 ntBASIC0.35□□□□□ -2.35
Shox2P70390 Gm22215-201ENSMUST00000157558 96 ntBASIC0.35□□□□□ -2.35
Shox2P70390 Gm23921-201ENSMUST00000175258 107 ntBASIC0.35□□□□□ -2.35
Shox2P70390 Mir191-201ENSMUST00000196210 74 ntBASIC0.35□□□□□ -2.35
Shox2P70390 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC0.35□□□□□ -2.35
Shox2P70390 AC104832.1-201ENSMUST00000222938 550 ntBASIC0.35□□□□□ -2.35
Shox2P70390 Gm23627-201ENSMUST00000082459 107 ntBASIC0.35□□□□□ -2.35
Shox2P70390 Gm22502-201ENSMUST00000082488 107 ntBASIC0.35□□□□□ -2.35
Shox2P70390 Gm22977-201ENSMUST00000082615 107 ntBASIC0.35□□□□□ -2.35
Shox2P70390 Gm24149-201ENSMUST00000082757 107 ntBASIC0.35□□□□□ -2.35
Shox2P70390 Gm25110-201ENSMUST00000116684 121 ntBASIC0.34□□□□□ -2.36
Shox2P70390 Gm25775-201ENSMUST00000116716 121 ntBASIC0.34□□□□□ -2.36
Shox2P70390 Gm24795-201ENSMUST00000116737 121 ntBASIC0.34□□□□□ -2.36
Shox2P70390 Gm25171-201ENSMUST00000116926 121 ntBASIC0.34□□□□□ -2.36
Shox2P70390 Gm14946-201ENSMUST00000119859 296 ntBASIC0.34□□□□□ -2.36
Shox2P70390 Gm26274-201ENSMUST00000157103 321 ntBASIC0.34□□□□□ -2.36
Shox2P70390 Gm25968-201ENSMUST00000157167 100 ntBASIC0.34□□□□□ -2.36
Shox2P70390 Gm23232-201ENSMUST00000157300 105 ntBASIC0.34□□□□□ -2.36
Shox2P70390 Gm22337-201ENSMUST00000157721 132 ntBASIC0.34□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms