Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Gm25895-201ENSMUST00000083714 100 ntBASIC1.78□□□□□ -2.12
SmoP56726 Gm24261-201ENSMUST00000083744 104 ntBASIC1.78□□□□□ -2.12
SmoP56726 Gm25884-201ENSMUST00000157782 62 ntBASIC1.77□□□□□ -2.13
SmoP56726 Gm25051-201ENSMUST00000158602 249 ntBASIC1.77□□□□□ -2.13
SmoP56726 Gm23864-201ENSMUST00000177607 107 ntBASIC1.77□□□□□ -2.13
SmoP56726 Mir7225-201ENSMUST00000184178 54 ntBASIC1.77□□□□□ -2.13
SmoP56726 Gm28537-201ENSMUST00000189026 315 ntBASIC1.77□□□□□ -2.13
SmoP56726 Gm29631-201ENSMUST00000191065 315 ntBASIC1.77□□□□□ -2.13
SmoP56726 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC1.77□□□□□ -2.13
SmoP56726 Mir471-201ENSMUST00000093596 67 ntBASIC1.77□□□□□ -2.13
SmoP56726 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.77□□□□□ -2.13
SmoP56726 Mir466h-201ENSMUST00000104748 81 ntBASIC1.76□□□□□ -2.13
SmoP56726 Gm25279-201ENSMUST00000122608 133 ntBASIC1.76□□□□□ -2.13
SmoP56726 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC1.76□□□□□ -2.13
SmoP56726 Gm23670-201ENSMUST00000157469 119 ntBASIC1.76□□□□□ -2.13
SmoP56726 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.76□□□□□ -2.13
SmoP56726 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC1.76□□□□□ -2.13
SmoP56726 Gm25730-201ENSMUST00000178753 165 ntBASIC1.76□□□□□ -2.13
SmoP56726 Gm27465-201ENSMUST00000184290 91 ntBASIC1.76□□□□□ -2.13
SmoP56726 Gm6003-201ENSMUST00000187903 463 ntBASIC1.76□□□□□ -2.13
SmoP56726 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
SmoP56726 Gm14917-201ENSMUST00000118872 2105 ntBASIC1.76□□□□□ -2.13
SmoP56726 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.75□□□□□ -2.13
SmoP56726 Gm14536-201ENSMUST00000118324 138 ntBASIC1.75□□□□□ -2.13
SmoP56726 Gm15027-201ENSMUST00000120922 138 ntBASIC1.75□□□□□ -2.13
SmoP56726 Gm43427-201ENSMUST00000198188 331 ntBASIC1.75□□□□□ -2.13
SmoP56726 Gm44057-201ENSMUST00000204547 96 ntBASIC1.75□□□□□ -2.13
SmoP56726 Gm45002-201ENSMUST00000208045 120 ntBASIC1.75□□□□□ -2.13
SmoP56726 Gm45754-201ENSMUST00000212380 279 ntBASIC1.75□□□□□ -2.13
SmoP56726 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
SmoP56726 Gm14709-201ENSMUST00000121225 304 ntBASIC1.74□□□□□ -2.13
SmoP56726 Gm23655-201ENSMUST00000122627 105 ntBASIC1.74□□□□□ -2.13
SmoP56726 Gm23172-201ENSMUST00000157160 124 ntBASIC1.74□□□□□ -2.13
SmoP56726 Gm24770-201ENSMUST00000158505 92 ntBASIC1.74□□□□□ -2.13
SmoP56726 Mir6419-201ENSMUST00000184784 113 ntBASIC1.74□□□□□ -2.13
SmoP56726 Mir1a-2-201ENSMUST00000198520 72 ntBASIC1.74□□□□□ -2.13
SmoP56726 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.74□□□□□ -2.13
SmoP56726 CT010449.1-201ENSMUST00000220624 153 ntBASIC1.74□□□□□ -2.13
SmoP56726 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.74□□□□□ -2.13
SmoP56726 Gm24457-201ENSMUST00000083196 105 ntBASIC1.74□□□□□ -2.13
SmoP56726 Gm24762-201ENSMUST00000083689 104 ntBASIC1.74□□□□□ -2.13
SmoP56726 Gm25627-201ENSMUST00000084003 153 ntBASIC1.74□□□□□ -2.13
SmoP56726 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
SmoP56726 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
SmoP56726 Gm22761-201ENSMUST00000102278 96 ntBASIC1.73□□□□□ -2.13
SmoP56726 Gm24375-201ENSMUST00000104397 132 ntBASIC1.73□□□□□ -2.13
SmoP56726 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
SmoP56726 Gm24572-201ENSMUST00000175505 88 ntBASIC1.73□□□□□ -2.13
SmoP56726 Gm26864-201ENSMUST00000181346 156 ntBASIC1.73□□□□□ -2.13
SmoP56726 Mir3569-201ENSMUST00000185080 58 ntBASIC1.73□□□□□ -2.13
SmoP56726 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.73□□□□□ -2.13
SmoP56726 Gm26225-201ENSMUST00000082508 135 ntBASIC1.73□□□□□ -2.13
SmoP56726 Gm22686-201ENSMUST00000082847 100 ntBASIC1.73□□□□□ -2.13
SmoP56726 Gm24929-201ENSMUST00000083403 139 ntBASIC1.73□□□□□ -2.13
SmoP56726 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
SmoP56726 Gm23011-201ENSMUST00000104148 132 ntBASIC1.72□□□□□ -2.13
SmoP56726 Gm24984-201ENSMUST00000104454 133 ntBASIC1.72□□□□□ -2.13
SmoP56726 Mir873a-201ENSMUST00000104863 77 ntBASIC1.72□□□□□ -2.13
SmoP56726 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.72□□□□□ -2.13
SmoP56726 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC1.72□□□□□ -2.13
SmoP56726 Gm23718-201ENSMUST00000157350 307 ntBASIC1.72□□□□□ -2.13
SmoP56726 Gm23113-201ENSMUST00000158477 99 ntBASIC1.72□□□□□ -2.13
SmoP56726 Gm44325-201ENSMUST00000196757 77 ntBASIC1.72□□□□□ -2.13
SmoP56726 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.72□□□□□ -2.13
SmoP56726 Gm23100-201ENSMUST00000083455 141 ntBASIC1.72□□□□□ -2.13
SmoP56726 n-R5s183-201ENSMUST00000083939 115 ntBASIC1.72□□□□□ -2.13
SmoP56726 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
SmoP56726 Gm27047-201ENSMUST00000183072 1819 ntBASIC1.71□□□□□ -2.14
SmoP56726 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
SmoP56726 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
SmoP56726 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC1.71□□□□□ -2.14
SmoP56726 Mir6379-201ENSMUST00000183392 115 ntBASIC1.71□□□□□ -2.14
SmoP56726 Gm21064-202ENSMUST00000190583 278 ntBASIC1.71□□□□□ -2.14
SmoP56726 Gm44326-201ENSMUST00000198226 101 ntBASIC1.71□□□□□ -2.14
SmoP56726 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.71□□□□□ -2.14
SmoP56726 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
SmoP56726 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
SmoP56726 Gm24276-201ENSMUST00000102181 110 ntBASIC1.7□□□□□ -2.14
SmoP56726 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.7□□□□□ -2.14
SmoP56726 Gm24783-201ENSMUST00000157639 100 ntBASIC1.7□□□□□ -2.14
SmoP56726 Gm23898-201ENSMUST00000158111 103 ntBASIC1.7□□□□□ -2.14
SmoP56726 Mir1931-201ENSMUST00000158589 119 ntBASIC1.7□□□□□ -2.14
SmoP56726 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.7□□□□□ -2.14
SmoP56726 Gm46993-201ENSMUST00000220708 259 ntBASIC1.7□□□□□ -2.14
SmoP56726 Mir302d-201ENSMUST00000083513 66 ntBASIC1.7□□□□□ -2.14
SmoP56726 Mir34a-201ENSMUST00000083559 102 ntBASIC1.7□□□□□ -2.14
SmoP56726 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
SmoP56726 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.69□□□□□ -2.14
SmoP56726 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.69□□□□□ -2.14
SmoP56726 Gm25377-201ENSMUST00000104334 129 ntBASIC1.69□□□□□ -2.14
SmoP56726 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
SmoP56726 Gm24015-201ENSMUST00000157725 232 ntBASIC1.69□□□□□ -2.14
SmoP56726 Gm23208-201ENSMUST00000158666 127 ntBASIC1.69□□□□□ -2.14
SmoP56726 Gm24222-201ENSMUST00000158834 93 ntBASIC1.69□□□□□ -2.14
SmoP56726 Mir3057-201ENSMUST00000175040 91 ntBASIC1.69□□□□□ -2.14
SmoP56726 Gm27285-201ENSMUST00000183875 127 ntBASIC1.69□□□□□ -2.14
SmoP56726 Gm27517-201ENSMUST00000184347 236 ntBASIC1.69□□□□□ -2.14
SmoP56726 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
SmoP56726 Gm26204-201ENSMUST00000082906 107 ntBASIC1.69□□□□□ -2.14
SmoP56726 Gm25401-201ENSMUST00000082975 106 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 195.3 ms