Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Mir450-2-201ENSMUST00000102444 69 ntBASIC-0.39□□□□□ -2.47
Cux1P53564 Gm17132-201ENSMUST00000109542 1158 ntBASIC-0.39□□□□□ -2.47
Cux1P53564 Gm24085-201ENSMUST00000175172 116 ntBASIC-0.39□□□□□ -2.47
Cux1P53564 Gm36946-201ENSMUST00000192706 435 ntBASIC-0.39□□□□□ -2.47
Cux1P53564 Gm44328-201ENSMUST00000199331 75 ntBASIC-0.39□□□□□ -2.47
Cux1P53564 Gm44803-201ENSMUST00000204384 156 ntBASIC-0.39□□□□□ -2.47
Cux1P53564 Mir16-2-201ENSMUST00000083672 95 ntBASIC-0.39□□□□□ -2.47
Cux1P53564 Gm24490-201ENSMUST00000083803 98 ntBASIC-0.39□□□□□ -2.47
Cux1P53564 Gm12771-201ENSMUST00000120246 135 ntBASIC-0.4□□□□□ -2.47
Cux1P53564 Gm24618-201ENSMUST00000177718 94 ntBASIC-0.4□□□□□ -2.47
Cux1P53564 Gm23953-201ENSMUST00000178214 94 ntBASIC-0.4□□□□□ -2.47
Cux1P53564 Gm26332-201ENSMUST00000179813 94 ntBASIC-0.4□□□□□ -2.47
Cux1P53564 Gm22863-201ENSMUST00000180265 94 ntBASIC-0.4□□□□□ -2.47
Cux1P53564 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC-0.4□□□□□ -2.47
Cux1P53564 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC-0.4□□□□□ -2.47
Cux1P53564 Gm18242-201ENSMUST00000218455 542 ntBASIC-0.4□□□□□ -2.47
Cux1P53564 Gm22685-201ENSMUST00000082848 106 ntBASIC-0.4□□□□□ -2.47
Cux1P53564 Mup-ps22-201ENSMUST00000121611 243 ntBASIC-0.41□□□□□ -2.48
Cux1P53564 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC-0.41□□□□□ -2.48
Cux1P53564 Gm25882-201ENSMUST00000157784 85 ntBASIC-0.41□□□□□ -2.48
Cux1P53564 Gm16307-201ENSMUST00000161269 210 ntBASIC-0.41□□□□□ -2.48
Cux1P53564 Gm22466-201ENSMUST00000175278 69 ntBASIC-0.41□□□□□ -2.48
Cux1P53564 Gm44142-201ENSMUST00000203358 311 ntBASIC-0.41□□□□□ -2.48
Cux1P53564 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC-0.41□□□□□ -2.48
Cux1P53564 Gm25878-201ENSMUST00000104327 93 ntBASIC-0.42□□□□□ -2.48
Cux1P53564 Gm11798-201ENSMUST00000119150 421 ntBASIC-0.42□□□□□ -2.48
Cux1P53564 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC-0.42□□□□□ -2.48
Cux1P53564 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC-0.42□□□□□ -2.48
Cux1P53564 Gm26203-201ENSMUST00000082911 114 ntBASIC-0.42□□□□□ -2.48
Cux1P53564 Mir350-201ENSMUST00000083639 99 ntBASIC-0.42□□□□□ -2.48
Cux1P53564 Gm45557-201ENSMUST00000210004 1651 ntBASIC-0.42□□□□□ -2.48
Cux1P53564 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC-0.43□□□□□ -2.48
Cux1P53564 Gm18185-201ENSMUST00000186725 667 ntBASIC-0.43□□□□□ -2.48
Cux1P53564 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC-0.43□□□□□ -2.48
Cux1P53564 Gm5023-201ENSMUST00000217442 587 ntBASIC-0.43□□□□□ -2.48
Cux1P53564 AC162857.1-201ENSMUST00000226614 400 ntBASIC-0.43□□□□□ -2.48
Cux1P53564 Gm24047-201ENSMUST00000102405 104 ntBASIC-0.43□□□□□ -2.48
Cux1P53564 Gm23013-201ENSMUST00000104146 106 ntBASIC-0.43□□□□□ -2.48
Cux1P53564 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC-0.43□□□□□ -2.48
Cux1P53564 Gm24409-201ENSMUST00000157881 152 ntBASIC-0.43□□□□□ -2.48
Cux1P53564 Mir1931-201ENSMUST00000158589 119 ntBASIC-0.43□□□□□ -2.48
Cux1P53564 Gm24345-201ENSMUST00000158706 124 ntBASIC-0.43□□□□□ -2.48
Cux1P53564 Gm24308-201ENSMUST00000177773 114 ntBASIC-0.43□□□□□ -2.48
Cux1P53564 Gm27385-201ENSMUST00000184747 104 ntBASIC-0.43□□□□□ -2.48
Cux1P53564 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC-0.44□□□□□ -2.48
Cux1P53564 Gm24005-201ENSMUST00000158459 296 ntBASIC-0.44□□□□□ -2.48
Cux1P53564 Gm22234-201ENSMUST00000174906 65 ntBASIC-0.44□□□□□ -2.48
Cux1P53564 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC-0.44□□□□□ -2.48
Cux1P53564 Gm28926-201ENSMUST00000191063 680 ntBASIC-0.44□□□□□ -2.48
Cux1P53564 CT009718.4-201ENSMUST00000221881 109 ntBASIC-0.45□□□□□ -2.48
Cux1P53564 AC116319.1-201ENSMUST00000227765 222 ntBASIC-0.45□□□□□ -2.48
Cux1P53564 AC114916.1-201ENSMUST00000228465 494 ntBASIC-0.45□□□□□ -2.48
Cux1P53564 AC129208.2-201ENSMUST00000228506 320 ntBASIC-0.45□□□□□ -2.48
Cux1P53564 Snord38a-201ENSMUST00000083746 71 ntBASIC-0.45□□□□□ -2.48
Cux1P53564 Gm25408-201ENSMUST00000104104 133 ntBASIC-0.46□□□□□ -2.48
Cux1P53564 Gm22543-201ENSMUST00000104347 94 ntBASIC-0.46□□□□□ -2.48
Cux1P53564 Gm14536-201ENSMUST00000118324 138 ntBASIC-0.46□□□□□ -2.48
Cux1P53564 Gm15027-201ENSMUST00000120922 138 ntBASIC-0.46□□□□□ -2.48
Cux1P53564 Gm24868-201ENSMUST00000157265 136 ntBASIC-0.46□□□□□ -2.48
Cux1P53564 Gm24077-201ENSMUST00000158183 136 ntBASIC-0.46□□□□□ -2.48
Cux1P53564 Gm27884-201ENSMUST00000183865 76 ntBASIC-0.46□□□□□ -2.48
Cux1P53564 Gm38261-201ENSMUST00000192608 316 ntBASIC-0.46□□□□□ -2.48
Cux1P53564 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC-0.46□□□□□ -2.48
Cux1P53564 Gm44923-201ENSMUST00000206673 85 ntBASIC-0.46□□□□□ -2.48
Cux1P53564 Gm45617-201ENSMUST00000211132 209 ntBASIC-0.46□□□□□ -2.48
Cux1P53564 Gm45471-201ENSMUST00000211270 281 ntBASIC-0.46□□□□□ -2.48
Cux1P53564 Gm22576-201ENSMUST00000083733 104 ntBASIC-0.46□□□□□ -2.48
Cux1P53564 Gm24796-201ENSMUST00000104007 107 ntBASIC-0.47□□□□□ -2.48
Cux1P53564 Gm24547-201ENSMUST00000158649 149 ntBASIC-0.47□□□□□ -2.48
Cux1P53564 Gm9593-201ENSMUST00000166034 469 ntBASIC-0.47□□□□□ -2.48
Cux1P53564 Gm37330-201ENSMUST00000192606 153 ntBASIC-0.47□□□□□ -2.48
Cux1P53564 Gm37641-201ENSMUST00000193837 239 ntBASIC-0.47□□□□□ -2.48
Cux1P53564 Gm13711-201ENSMUST00000119708 453 ntBASIC-0.48□□□□□ -2.49
Cux1P53564 Gm24500-201ENSMUST00000158447 124 ntBASIC-0.48□□□□□ -2.49
Cux1P53564 Gm25486-201ENSMUST00000158726 63 ntBASIC-0.48□□□□□ -2.49
Cux1P53564 Gm27943-201ENSMUST00000184844 116 ntBASIC-0.48□□□□□ -2.49
Cux1P53564 Gm45197-201ENSMUST00000205288 151 ntBASIC-0.48□□□□□ -2.49
Cux1P53564 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC-0.48□□□□□ -2.49
Cux1P53564 Gm25582-201ENSMUST00000083412 110 ntBASIC-0.48□□□□□ -2.49
Cux1P53564 Mir133a-1-201ENSMUST00000083465 68 ntBASIC-0.48□□□□□ -2.49
Cux1P53564 Gm14491-201ENSMUST00000121919 199 ntBASIC-0.48□□□□□ -2.49
Cux1P53564 Gm24000-201ENSMUST00000158063 89 ntBASIC-0.48□□□□□ -2.49
Cux1P53564 Gm37715-201ENSMUST00000193206 235 ntBASIC-0.48□□□□□ -2.49
Cux1P53564 Gm45508-201ENSMUST00000209298 299 ntBASIC-0.48□□□□□ -2.49
Cux1P53564 Gm24091-201ENSMUST00000082550 83 ntBASIC-0.48□□□□□ -2.49
Cux1P53564 Gm24707-201ENSMUST00000082812 107 ntBASIC-0.48□□□□□ -2.49
Cux1P53564 Gm25894-201ENSMUST00000083458 75 ntBASIC-0.48□□□□□ -2.49
Cux1P53564 Gm23711-201ENSMUST00000083856 83 ntBASIC-0.48□□□□□ -2.49
Cux1P53564 Gm23113-201ENSMUST00000158477 99 ntBASIC-0.49□□□□□ -2.49
Cux1P53564 Gm22887-201ENSMUST00000178586 107 ntBASIC-0.49□□□□□ -2.49
Cux1P53564 Mir6342-201ENSMUST00000183870 125 ntBASIC-0.49□□□□□ -2.49
Cux1P53564 Gm29817-201ENSMUST00000210098 172 ntBASIC-0.49□□□□□ -2.49
Cux1P53564 AC155712.1-201ENSMUST00000219704 160 ntBASIC-0.49□□□□□ -2.49
Cux1P53564 Gm13341-201ENSMUST00000120780 672 ntBASIC-0.5□□□□□ -2.49
Cux1P53564 Gm44063-201ENSMUST00000203307 376 ntBASIC-0.5□□□□□ -2.49
Cux1P53564 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC-0.5□□□□□ -2.49
Cux1P53564 AC117202.2-201ENSMUST00000226491 1101 ntBASIC-0.5□□□□□ -2.49
Cux1P53564 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC-0.51□□□□□ -2.49
Cux1P53564 Gm26135-201ENSMUST00000101993 72 ntBASIC-0.51□□□□□ -2.49
Cux1P53564 Gm24577-201ENSMUST00000158580 63 ntBASIC-0.51□□□□□ -2.49
Retrieved 100 of 76,532 protein–RNA pairs in 112.4 ms