Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Gm24261-201ENSMUST00000083744 104 ntBASIC1.96□□□□□ -2.1
Ercc3P49135 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.95□□□□□ -2.1
Ercc3P49135 Gm25068-201ENSMUST00000103895 110 ntBASIC1.95□□□□□ -2.1
Ercc3P49135 Gm24867-201ENSMUST00000104161 107 ntBASIC1.95□□□□□ -2.1
Ercc3P49135 Gm26026-201ENSMUST00000122726 123 ntBASIC1.95□□□□□ -2.1
Ercc3P49135 Gm23901-201ENSMUST00000157570 107 ntBASIC1.95□□□□□ -2.1
Ercc3P49135 Mir1967-201ENSMUST00000157789 82 ntBASIC1.95□□□□□ -2.1
Ercc3P49135 Gm22621-201ENSMUST00000179678 74 ntBASIC1.95□□□□□ -2.1
Ercc3P49135 Gm27476-201ENSMUST00000183366 104 ntBASIC1.95□□□□□ -2.1
Ercc3P49135 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC1.95□□□□□ -2.1
Ercc3P49135 Gm25482-201ENSMUST00000083225 107 ntBASIC1.95□□□□□ -2.1
Ercc3P49135 Gm24453-201ENSMUST00000083346 76 ntBASIC1.95□□□□□ -2.1
Ercc3P49135 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Ercc3P49135 Gm42718-201ENSMUST00000197319 2681 ntBASIC1.94□□□□□ -2.1
Ercc3P49135 Gm15214-201ENSMUST00000122155 470 ntBASIC1.94□□□□□ -2.1
Ercc3P49135 Gm22279-201ENSMUST00000157200 93 ntBASIC1.94□□□□□ -2.1
Ercc3P49135 Gm23718-201ENSMUST00000157350 307 ntBASIC1.94□□□□□ -2.1
Ercc3P49135 Gm25015-201ENSMUST00000158400 128 ntBASIC1.94□□□□□ -2.1
Ercc3P49135 Gm25654-201ENSMUST00000158467 88 ntBASIC1.94□□□□□ -2.1
Ercc3P49135 Gm24415-201ENSMUST00000180218 107 ntBASIC1.94□□□□□ -2.1
Ercc3P49135 Gm34139-201ENSMUST00000196166 294 ntBASIC1.94□□□□□ -2.1
Ercc3P49135 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Ercc3P49135 Gm25565-201ENSMUST00000104605 105 ntBASIC1.93□□□□□ -2.1
Ercc3P49135 Gm24640-201ENSMUST00000116949 126 ntBASIC1.93□□□□□ -2.1
Ercc3P49135 Gm22626-201ENSMUST00000116990 126 ntBASIC1.93□□□□□ -2.1
Ercc3P49135 Gm15115-201ENSMUST00000121145 264 ntBASIC1.93□□□□□ -2.1
Ercc3P49135 Gm25390-201ENSMUST00000157341 103 ntBASIC1.93□□□□□ -2.1
Ercc3P49135 Gm24262-201ENSMUST00000157431 144 ntBASIC1.93□□□□□ -2.1
Ercc3P49135 Gm26482-201ENSMUST00000158015 62 ntBASIC1.93□□□□□ -2.1
Ercc3P49135 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Ercc3P49135 Gm24761-201ENSMUST00000179589 127 ntBASIC1.93□□□□□ -2.1
Ercc3P49135 Gm24488-201ENSMUST00000179934 127 ntBASIC1.93□□□□□ -2.1
Ercc3P49135 Gm25701-201ENSMUST00000179988 127 ntBASIC1.93□□□□□ -2.1
Ercc3P49135 Gm23571-201ENSMUST00000180073 127 ntBASIC1.93□□□□□ -2.1
Ercc3P49135 Gm26431-201ENSMUST00000180199 127 ntBASIC1.93□□□□□ -2.1
Ercc3P49135 Gm27585-201ENSMUST00000183717 199 ntBASIC1.93□□□□□ -2.1
Ercc3P49135 Gm28383-201ENSMUST00000187563 139 ntBASIC1.93□□□□□ -2.1
Ercc3P49135 Gm29262-201ENSMUST00000190084 196 ntBASIC1.93□□□□□ -2.1
Ercc3P49135 Mir410-201ENSMUST00000083563 81 ntBASIC1.93□□□□□ -2.1
Ercc3P49135 Mir148b-201ENSMUST00000083626 97 ntBASIC1.93□□□□□ -2.1
Ercc3P49135 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Ercc3P49135 Mir467g-201ENSMUST00000116906 120 ntBASIC1.92□□□□□ -2.1
Ercc3P49135 Gm12771-201ENSMUST00000120246 135 ntBASIC1.92□□□□□ -2.1
Ercc3P49135 Gm22665-201ENSMUST00000158720 275 ntBASIC1.92□□□□□ -2.1
Ercc3P49135 Gm27517-201ENSMUST00000184347 236 ntBASIC1.92□□□□□ -2.1
Ercc3P49135 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.92□□□□□ -2.1
Ercc3P49135 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.92□□□□□ -2.1
Ercc3P49135 Gm45508-201ENSMUST00000209298 299 ntBASIC1.92□□□□□ -2.1
Ercc3P49135 AC098718.1-201ENSMUST00000226166 175 ntBASIC1.92□□□□□ -2.1
Ercc3P49135 AC154213.2-201ENSMUST00000227138 187 ntBASIC1.92□□□□□ -2.1
Ercc3P49135 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.91□□□□□ -2.1
Ercc3P49135 Snord19-201ENSMUST00000104609 76 ntBASIC1.91□□□□□ -2.1
Ercc3P49135 Gm14838-201ENSMUST00000118913 248 ntBASIC1.91□□□□□ -2.1
Ercc3P49135 Gm13797-201ENSMUST00000121792 120 ntBASIC1.91□□□□□ -2.1
Ercc3P49135 Gm24595-201ENSMUST00000122501 110 ntBASIC1.91□□□□□ -2.1
Ercc3P49135 Gm25423-201ENSMUST00000157609 107 ntBASIC1.91□□□□□ -2.1
Ercc3P49135 Gm27265-201ENSMUST00000183559 77 ntBASIC1.91□□□□□ -2.1
Ercc3P49135 Gm33866-201ENSMUST00000196911 289 ntBASIC1.91□□□□□ -2.1
Ercc3P49135 Gm42719-201ENSMUST00000197393 355 ntBASIC1.91□□□□□ -2.1
Ercc3P49135 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC1.91□□□□□ -2.1
Ercc3P49135 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.9□□□□□ -2.1
Ercc3P49135 Gm26080-201ENSMUST00000104069 131 ntBASIC1.9□□□□□ -2.11
Ercc3P49135 Gm13560-201ENSMUST00000121865 329 ntBASIC1.9□□□□□ -2.11
Ercc3P49135 Gm23545-201ENSMUST00000158205 104 ntBASIC1.9□□□□□ -2.11
Ercc3P49135 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
Ercc3P49135 Gm22744-201ENSMUST00000083444 65 ntBASIC1.9□□□□□ -2.11
Ercc3P49135 Mir320-201ENSMUST00000083594 82 ntBASIC1.9□□□□□ -2.11
Ercc3P49135 Gm12080-201ENSMUST00000119821 1883 ntBASIC1.89□□□□□ -2.11
Ercc3P49135 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Ercc3P49135 Gm25541-201ENSMUST00000116888 126 ntBASIC1.89□□□□□ -2.11
Ercc3P49135 Gm13801-201ENSMUST00000120750 160 ntBASIC1.89□□□□□ -2.11
Ercc3P49135 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC1.89□□□□□ -2.11
Ercc3P49135 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.89□□□□□ -2.11
Ercc3P49135 Gm29613-201ENSMUST00000185846 313 ntBASIC1.89□□□□□ -2.11
Ercc3P49135 Gm29544-201ENSMUST00000188860 313 ntBASIC1.89□□□□□ -2.11
Ercc3P49135 Gm28808-201ENSMUST00000190978 313 ntBASIC1.89□□□□□ -2.11
Ercc3P49135 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.89□□□□□ -2.11
Ercc3P49135 Gm25634-201ENSMUST00000082667 105 ntBASIC1.89□□□□□ -2.11
Ercc3P49135 Mir146-201ENSMUST00000083667 65 ntBASIC1.89□□□□□ -2.11
Ercc3P49135 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Ercc3P49135 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
Ercc3P49135 Gm26339-201ENSMUST00000102368 99 ntBASIC1.88□□□□□ -2.11
Ercc3P49135 Gm23766-201ENSMUST00000103894 80 ntBASIC1.88□□□□□ -2.11
Ercc3P49135 Gm25316-201ENSMUST00000116826 118 ntBASIC1.88□□□□□ -2.11
Ercc3P49135 Gm23194-201ENSMUST00000158813 105 ntBASIC1.88□□□□□ -2.11
Ercc3P49135 Gm24174-201ENSMUST00000158933 111 ntBASIC1.88□□□□□ -2.11
Ercc3P49135 Gm23714-201ENSMUST00000179259 105 ntBASIC1.88□□□□□ -2.11
Ercc3P49135 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.88□□□□□ -2.11
Ercc3P49135 Gm45116-201ENSMUST00000207392 275 ntBASIC1.88□□□□□ -2.11
Ercc3P49135 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC1.88□□□□□ -2.11
Ercc3P49135 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.87□□□□□ -2.11
Ercc3P49135 Gm25783-201ENSMUST00000122525 190 ntBASIC1.87□□□□□ -2.11
Ercc3P49135 Gm22553-201ENSMUST00000157797 295 ntBASIC1.87□□□□□ -2.11
Ercc3P49135 Gm23558-201ENSMUST00000157823 80 ntBASIC1.87□□□□□ -2.11
Ercc3P49135 Gm23665-201ENSMUST00000158054 62 ntBASIC1.87□□□□□ -2.11
Ercc3P49135 Gm25831-201ENSMUST00000158924 163 ntBASIC1.87□□□□□ -2.11
Ercc3P49135 Gm23267-201ENSMUST00000178490 132 ntBASIC1.87□□□□□ -2.11
Ercc3P49135 Gm25935-201ENSMUST00000178746 107 ntBASIC1.87□□□□□ -2.11
Ercc3P49135 Gm22259-201ENSMUST00000178926 107 ntBASIC1.87□□□□□ -2.11
Ercc3P49135 Gm44853-201ENSMUST00000209070 250 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms