Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.92□□□□□ -1.94
Rfx1P48377 Gm34314-201ENSMUST00000203622 367 ntBASIC2.92□□□□□ -1.94
Rfx1P48377 Gm25588-201ENSMUST00000082501 140 ntBASIC2.92□□□□□ -1.94
Rfx1P48377 Gm44177-201ENSMUST00000204338 2667 ntBASIC2.91□□□□□ -1.94
Rfx1P48377 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Rfx1P48377 Gm26074-201ENSMUST00000104063 129 ntBASIC2.91□□□□□ -1.94
Rfx1P48377 Gm22674-201ENSMUST00000104413 131 ntBASIC2.91□□□□□ -1.94
Rfx1P48377 Gm14937-201ENSMUST00000119709 208 ntBASIC2.91□□□□□ -1.94
Rfx1P48377 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC2.91□□□□□ -1.94
Rfx1P48377 Gm25558-201ENSMUST00000158083 106 ntBASIC2.91□□□□□ -1.94
Rfx1P48377 Gm24210-201ENSMUST00000158263 133 ntBASIC2.91□□□□□ -1.94
Rfx1P48377 Mir3092-201ENSMUST00000174954 96 ntBASIC2.91□□□□□ -1.94
Rfx1P48377 Gm44358-201ENSMUST00000196301 98 ntBASIC2.91□□□□□ -1.94
Rfx1P48377 Gm22828-201ENSMUST00000083768 107 ntBASIC2.91□□□□□ -1.94
Rfx1P48377 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
Rfx1P48377 Gm15281-201ENSMUST00000125181 351 ntBASIC2.9□□□□□ -1.95
Rfx1P48377 Gm22790-201ENSMUST00000157229 129 ntBASIC2.9□□□□□ -1.95
Rfx1P48377 Mir7039-201ENSMUST00000183852 85 ntBASIC2.9□□□□□ -1.95
Rfx1P48377 Gm18665-201ENSMUST00000189783 270 ntBASIC2.9□□□□□ -1.95
Rfx1P48377 Gm22866-201ENSMUST00000083947 177 ntBASIC2.9□□□□□ -1.95
Rfx1P48377 Gm22750-201ENSMUST00000102076 103 ntBASIC2.89□□□□□ -1.95
Rfx1P48377 Gm25878-201ENSMUST00000104327 93 ntBASIC2.89□□□□□ -1.95
Rfx1P48377 Gm24958-201ENSMUST00000158009 97 ntBASIC2.89□□□□□ -1.95
Rfx1P48377 Gm22163-201ENSMUST00000158408 135 ntBASIC2.89□□□□□ -1.95
Rfx1P48377 Gm26406-201ENSMUST00000158503 124 ntBASIC2.89□□□□□ -1.95
Rfx1P48377 Gm26215-201ENSMUST00000158584 139 ntBASIC2.89□□□□□ -1.95
Rfx1P48377 Gm23504-201ENSMUST00000158988 95 ntBASIC2.89□□□□□ -1.95
Rfx1P48377 Gm20477-201ENSMUST00000174028 280 ntBASIC2.89□□□□□ -1.95
Rfx1P48377 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.89□□□□□ -1.95
Rfx1P48377 Gm25409-201ENSMUST00000083764 131 ntBASIC2.89□□□□□ -1.95
Rfx1P48377 Gm22486-201ENSMUST00000116815 137 ntBASIC2.88□□□□□ -1.95
Rfx1P48377 Gm14626-201ENSMUST00000117619 216 ntBASIC2.88□□□□□ -1.95
Rfx1P48377 Gm24691-201ENSMUST00000157762 140 ntBASIC2.88□□□□□ -1.95
Rfx1P48377 Gm24212-201ENSMUST00000158258 132 ntBASIC2.88□□□□□ -1.95
Rfx1P48377 Gm23268-201ENSMUST00000175494 78 ntBASIC2.88□□□□□ -1.95
Rfx1P48377 Mir6386-201ENSMUST00000183558 104 ntBASIC2.88□□□□□ -1.95
Rfx1P48377 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Rfx1P48377 Gm27979-201ENSMUST00000185126 56 ntBASIC2.88□□□□□ -1.95
Rfx1P48377 Gm8219-201ENSMUST00000218309 242 ntBASIC2.88□□□□□ -1.95
Rfx1P48377 Gm25697-201ENSMUST00000082902 98 ntBASIC2.88□□□□□ -1.95
Rfx1P48377 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Rfx1P48377 Gm24122-201ENSMUST00000104107 132 ntBASIC2.87□□□□□ -1.95
Rfx1P48377 Gm22228-201ENSMUST00000157364 101 ntBASIC2.87□□□□□ -1.95
Rfx1P48377 Gm23044-201ENSMUST00000157891 100 ntBASIC2.87□□□□□ -1.95
Rfx1P48377 Gm22387-201ENSMUST00000158191 131 ntBASIC2.87□□□□□ -1.95
Rfx1P48377 Mir3086-201ENSMUST00000175072 87 ntBASIC2.87□□□□□ -1.95
Rfx1P48377 Mir3965-201ENSMUST00000175570 69 ntBASIC2.87□□□□□ -1.95
Rfx1P48377 Gm27379-201ENSMUST00000183730 123 ntBASIC2.87□□□□□ -1.95
Rfx1P48377 Gm43602-201ENSMUST00000196772 300 ntBASIC2.87□□□□□ -1.95
Rfx1P48377 Snord43-201ENSMUST00000199549 108 ntBASIC2.87□□□□□ -1.95
Rfx1P48377 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC2.87□□□□□ -1.95
Rfx1P48377 Gm45522-201ENSMUST00000210784 166 ntBASIC2.87□□□□□ -1.95
Rfx1P48377 Gm26494-201ENSMUST00000083154 143 ntBASIC2.87□□□□□ -1.95
Rfx1P48377 Gm24493-201ENSMUST00000083805 143 ntBASIC2.87□□□□□ -1.95
Rfx1P48377 Gm24449-201ENSMUST00000083985 106 ntBASIC2.87□□□□□ -1.95
Rfx1P48377 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Rfx1P48377 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Rfx1P48377 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.86□□□□□ -1.95
Rfx1P48377 Gm26415-201ENSMUST00000157673 292 ntBASIC2.86□□□□□ -1.95
Rfx1P48377 Gm22947-201ENSMUST00000158559 91 ntBASIC2.86□□□□□ -1.95
Rfx1P48377 Gm25364-201ENSMUST00000158851 107 ntBASIC2.86□□□□□ -1.95
Rfx1P48377 Gm23445-201ENSMUST00000082800 107 ntBASIC2.86□□□□□ -1.95
Rfx1P48377 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.85□□□□□ -1.95
Rfx1P48377 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Rfx1P48377 Mir466k-201ENSMUST00000116774 122 ntBASIC2.85□□□□□ -1.95
Rfx1P48377 Gm11334-201ENSMUST00000121969 156 ntBASIC2.85□□□□□ -1.95
Rfx1P48377 Gm16584-201ENSMUST00000159267 189 ntBASIC2.85□□□□□ -1.95
Rfx1P48377 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.85□□□□□ -1.95
Rfx1P48377 Gm45544-201ENSMUST00000211130 88 ntBASIC2.85□□□□□ -1.95
Rfx1P48377 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.85□□□□□ -1.95
Rfx1P48377 Gm24705-201ENSMUST00000082808 107 ntBASIC2.85□□□□□ -1.95
Rfx1P48377 Gm14502-201ENSMUST00000118154 113 ntBASIC2.84□□□□□ -1.95
Rfx1P48377 Gm11644-201ENSMUST00000119735 150 ntBASIC2.84□□□□□ -1.95
Rfx1P48377 Gm23656-201ENSMUST00000122626 112 ntBASIC2.84□□□□□ -1.95
Rfx1P48377 Gm26280-201ENSMUST00000157096 101 ntBASIC2.84□□□□□ -1.95
Rfx1P48377 Gm29604-201ENSMUST00000187176 163 ntBASIC2.84□□□□□ -1.95
Rfx1P48377 Gm44320-201ENSMUST00000199276 86 ntBASIC2.84□□□□□ -1.95
Rfx1P48377 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC2.84□□□□□ -1.95
Rfx1P48377 Gm24313-201ENSMUST00000082561 133 ntBASIC2.84□□□□□ -1.95
Rfx1P48377 Gm22743-201ENSMUST00000083445 133 ntBASIC2.84□□□□□ -1.95
Rfx1P48377 Mir9-2-201ENSMUST00000083490 72 ntBASIC2.84□□□□□ -1.95
Rfx1P48377 Mir151-201ENSMUST00000083678 68 ntBASIC2.84□□□□□ -1.95
Rfx1P48377 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.83□□□□□ -1.96
Rfx1P48377 Gm14671-201ENSMUST00000121790 262 ntBASIC2.83□□□□□ -1.96
Rfx1P48377 Gm7209-201ENSMUST00000122339 333 ntBASIC2.83□□□□□ -1.96
Rfx1P48377 Gm24747-201ENSMUST00000157835 87 ntBASIC2.83□□□□□ -1.96
Rfx1P48377 Gm25796-201ENSMUST00000082645 163 ntBASIC2.83□□□□□ -1.96
Rfx1P48377 Gm23303-201ENSMUST00000082714 152 ntBASIC2.83□□□□□ -1.96
Rfx1P48377 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC2.83□□□□□ -1.96
Rfx1P48377 Gm25879-201ENSMUST00000104330 107 ntBASIC2.82□□□□□ -1.96
Rfx1P48377 Mir7068-201ENSMUST00000183439 74 ntBASIC2.82□□□□□ -1.96
Rfx1P48377 Gm27505-201ENSMUST00000185071 110 ntBASIC2.82□□□□□ -1.96
Rfx1P48377 Gm43898-201ENSMUST00000204456 424 ntBASIC2.82□□□□□ -1.96
Rfx1P48377 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC2.82□□□□□ -1.96
Rfx1P48377 Snora3-201ENSMUST00000083082 132 ntBASIC2.82□□□□□ -1.96
Rfx1P48377 Gm24616-201ENSMUST00000083274 139 ntBASIC2.82□□□□□ -1.96
Rfx1P48377 Mir490-201ENSMUST00000093567 84 ntBASIC2.82□□□□□ -1.96
Rfx1P48377 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Rfx1P48377 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.82□□□□□ -1.96
Rfx1P48377 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms