Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm23196-201ENSMUST00000158806 107 ntBASIC-1.06□□□□□ -2.58
HttP42859 Mir1949-202ENSMUST00000199259 70 ntBASIC-1.06□□□□□ -2.58
HttP42859 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC-1.06□□□□□ -2.58
HttP42859 Gm22652-201ENSMUST00000083207 131 ntBASIC-1.06□□□□□ -2.58
HttP42859 Gm23751-201ENSMUST00000157583 136 ntBASIC-1.06□□□□□ -2.58
HttP42859 Gm23032-201ENSMUST00000157995 107 ntBASIC-1.06□□□□□ -2.58
HttP42859 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC-1.06□□□□□ -2.58
HttP42859 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC-1.06□□□□□ -2.58
HttP42859 Gm22283-201ENSMUST00000082556 161 ntBASIC-1.06□□□□□ -2.58
HttP42859 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC-1.06□□□□□ -2.58
HttP42859 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC-1.06□□□□□ -2.58
HttP42859 CT030184.1-201ENSMUST00000222393 416 ntBASIC-1.06□□□□□ -2.58
HttP42859 Gm23301-201ENSMUST00000082713 65 ntBASIC-1.06□□□□□ -2.58
HttP42859 Gm26123-201ENSMUST00000083363 135 ntBASIC-1.06□□□□□ -2.58
HttP42859 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC-1.07□□□□□ -2.58
HttP42859 Gm23584-201ENSMUST00000157655 129 ntBASIC-1.07□□□□□ -2.58
HttP42859 Gm24880-201ENSMUST00000158776 85 ntBASIC-1.07□□□□□ -2.58
HttP42859 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC-1.07□□□□□ -2.58
HttP42859 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC-1.07□□□□□ -2.58
HttP42859 Gm25325-201ENSMUST00000122559 86 ntBASIC-1.07□□□□□ -2.58
HttP42859 Gm22479-201ENSMUST00000122566 81 ntBASIC-1.07□□□□□ -2.58
HttP42859 Gm22332-201ENSMUST00000158072 126 ntBASIC-1.07□□□□□ -2.58
HttP42859 AC100209.2-201ENSMUST00000224461 451 ntBASIC-1.07□□□□□ -2.58
HttP42859 Gm26255-201ENSMUST00000122492 103 ntBASIC-1.08□□□□□ -2.58
HttP42859 Gm26239-201ENSMUST00000178842 107 ntBASIC-1.08□□□□□ -2.58
HttP42859 Gm25327-201ENSMUST00000180263 107 ntBASIC-1.08□□□□□ -2.58
HttP42859 Gm22749-201ENSMUST00000082490 107 ntBASIC-1.08□□□□□ -2.58
HttP42859 Gm25577-201ENSMUST00000083414 107 ntBASIC-1.08□□□□□ -2.58
HttP42859 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC-1.08□□□□□ -2.58
HttP42859 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC-1.08□□□□□ -2.58
HttP42859 Gm22030-201ENSMUST00000116942 63 ntBASIC-1.09□□□□□ -2.58
HttP42859 Gm26355-201ENSMUST00000158220 105 ntBASIC-1.09□□□□□ -2.58
HttP42859 Mir7661-201ENSMUST00000197023 61 ntBASIC-1.09□□□□□ -2.58
HttP42859 Gm44351-201ENSMUST00000200090 95 ntBASIC-1.09□□□□□ -2.58
HttP42859 Gm43943-201ENSMUST00000204201 113 ntBASIC-1.09□□□□□ -2.58
HttP42859 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC-1.09□□□□□ -2.58
HttP42859 AC159246.1-201ENSMUST00000214478 249 ntBASIC-1.09□□□□□ -2.58
HttP42859 Snord57-201ENSMUST00000083338 72 ntBASIC-1.09□□□□□ -2.58
HttP42859 Gm24917-201ENSMUST00000083935 104 ntBASIC-1.09□□□□□ -2.58
HttP42859 Mir702-201ENSMUST00000102285 109 ntBASIC-1.1□□□□□ -2.59
HttP42859 Gm25510-201ENSMUST00000116986 123 ntBASIC-1.1□□□□□ -2.59
HttP42859 AC141438.3-201ENSMUST00000215632 202 ntBASIC-1.1□□□□□ -2.59
HttP42859 Gm26062-201ENSMUST00000083379 107 ntBASIC-1.1□□□□□ -2.59
HttP42859 Mir496a-201ENSMUST00000093627 79 ntBASIC-1.1□□□□□ -2.59
HttP42859 Mir297b-201ENSMUST00000102268 109 ntBASIC-1.1□□□□□ -2.59
HttP42859 Gm22935-201ENSMUST00000103960 104 ntBASIC-1.1□□□□□ -2.59
HttP42859 Gm25097-201ENSMUST00000104042 145 ntBASIC-1.1□□□□□ -2.59
HttP42859 Gm26478-201ENSMUST00000122611 133 ntBASIC-1.1□□□□□ -2.59
HttP42859 Gm24481-201ENSMUST00000157210 102 ntBASIC-1.1□□□□□ -2.59
HttP42859 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC-1.1□□□□□ -2.59
HttP42859 Gm43993-201ENSMUST00000203972 247 ntBASIC-1.1□□□□□ -2.59
HttP42859 Gm22743-201ENSMUST00000083445 133 ntBASIC-1.1□□□□□ -2.59
HttP42859 Gm22656-201ENSMUST00000104199 171 ntBASIC-1.11□□□□□ -2.59
HttP42859 Gm22097-201ENSMUST00000157929 278 ntBASIC-1.11□□□□□ -2.59
HttP42859 Gm24728-201ENSMUST00000158226 125 ntBASIC-1.11□□□□□ -2.59
HttP42859 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC-1.11□□□□□ -2.59
HttP42859 Gm19901-201ENSMUST00000192191 495 ntBASIC-1.11□□□□□ -2.59
HttP42859 Gm23012-201ENSMUST00000104149 83 ntBASIC-1.11□□□□□ -2.59
HttP42859 Gm25444-201ENSMUST00000158999 113 ntBASIC-1.11□□□□□ -2.59
HttP42859 Gm24100-201ENSMUST00000178592 79 ntBASIC-1.11□□□□□ -2.59
HttP42859 Gm44468-201ENSMUST00000199516 105 ntBASIC-1.11□□□□□ -2.59
HttP42859 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC-1.12□□□□□ -2.59
HttP42859 Gm25253-201ENSMUST00000179958 107 ntBASIC-1.12□□□□□ -2.59
HttP42859 AC125190.3-201ENSMUST00000223224 121 ntBASIC-1.12□□□□□ -2.59
HttP42859 Gm25494-201ENSMUST00000158143 100 ntBASIC-1.12□□□□□ -2.59
HttP42859 Gm4076-201ENSMUST00000179230 965 ntBASIC-1.12□□□□□ -2.59
HttP42859 Gm26314-201ENSMUST00000083891 107 ntBASIC-1.12□□□□□ -2.59
HttP42859 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC-1.13□□□□□ -2.59
HttP42859 Gm25297-201ENSMUST00000175490 67 ntBASIC-1.13□□□□□ -2.59
HttP42859 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC-1.13□□□□□ -2.59
HttP42859 AC164629.1-201ENSMUST00000220250 1113 ntBASIC-1.13□□□□□ -2.59
HttP42859 Gm23741-201ENSMUST00000097237 171 ntBASIC-1.13□□□□□ -2.59
HttP42859 Gm45263-201ENSMUST00000210377 1375 ntBASIC-1.13□□□□□ -2.59
HttP42859 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-1.13□□□□□ -2.59
HttP42859 Gm24839-201ENSMUST00000122602 107 ntBASIC-1.13□□□□□ -2.59
HttP42859 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC-1.13□□□□□ -2.59
HttP42859 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC-1.13□□□□□ -2.59
HttP42859 Mir363-201ENSMUST00000093598 75 ntBASIC-1.13□□□□□ -2.59
HttP42859 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC-1.13□□□□□ -2.59
HttP42859 Gm15176-201ENSMUST00000117734 135 ntBASIC-1.13□□□□□ -2.59
HttP42859 Gm22100-201ENSMUST00000157926 63 ntBASIC-1.13□□□□□ -2.59
HttP42859 Gm23308-201ENSMUST00000179475 107 ntBASIC-1.13□□□□□ -2.59
HttP42859 AC192334.2-201ENSMUST00000223087 1091 ntBASIC-1.13□□□□□ -2.59
HttP42859 Gm23975-201ENSMUST00000082685 106 ntBASIC-1.13□□□□□ -2.59
HttP42859 Defa-ps13-201ENSMUST00000120695 204 ntBASIC-1.14□□□□□ -2.59
HttP42859 Gm23921-201ENSMUST00000175258 107 ntBASIC-1.14□□□□□ -2.59
HttP42859 Snora26-201ENSMUST00000175614 121 ntBASIC-1.14□□□□□ -2.59
HttP42859 Gm26073-201ENSMUST00000179906 127 ntBASIC-1.14□□□□□ -2.59
HttP42859 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC-1.14□□□□□ -2.59
HttP42859 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC-1.14□□□□□ -2.59
HttP42859 Gm26329-201ENSMUST00000093723 110 ntBASIC-1.14□□□□□ -2.59
HttP42859 Gm12016-201ENSMUST00000119079 681 ntBASIC-1.14□□□□□ -2.59
HttP42859 Gm15030-201ENSMUST00000119804 484 ntBASIC-1.14□□□□□ -2.59
HttP42859 Gm23169-201ENSMUST00000157157 112 ntBASIC-1.14□□□□□ -2.59
HttP42859 Gm20391-201ENSMUST00000174722 106 ntBASIC-1.14□□□□□ -2.59
HttP42859 Gm43563-201ENSMUST00000196761 198 ntBASIC-1.14□□□□□ -2.59
HttP42859 Gm22401-201ENSMUST00000174927 117 ntBASIC-1.15□□□□□ -2.59
HttP42859 Gm25473-201ENSMUST00000180191 107 ntBASIC-1.15□□□□□ -2.59
HttP42859 Gm24625-201ENSMUST00000082622 130 ntBASIC-1.15□□□□□ -2.59
HttP42859 Gm25897-201ENSMUST00000083709 107 ntBASIC-1.15□□□□□ -2.59
Retrieved 100 of 76,532 protein–RNA pairs in 155.2 ms