Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC1.03□□□□□ -2.24
Cd40lgP27548 Gm13560-201ENSMUST00000121865 329 ntBASIC1.03□□□□□ -2.24
Cd40lgP27548 Gm24595-201ENSMUST00000122501 110 ntBASIC1.03□□□□□ -2.24
Cd40lgP27548 n-R5s188-201ENSMUST00000122646 105 ntBASIC1.03□□□□□ -2.24
Cd40lgP27548 Gm25768-201ENSMUST00000158570 98 ntBASIC1.03□□□□□ -2.24
Cd40lgP27548 Gm22929-201ENSMUST00000175517 107 ntBASIC1.03□□□□□ -2.24
Cd40lgP27548 Gm25615-201ENSMUST00000177836 94 ntBASIC1.03□□□□□ -2.24
Cd40lgP27548 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
Cd40lgP27548 Mir7063-201ENSMUST00000184158 91 ntBASIC1.03□□□□□ -2.24
Cd40lgP27548 Gm44373-201ENSMUST00000196112 169 ntBASIC1.03□□□□□ -2.24
Cd40lgP27548 Gm43602-201ENSMUST00000196772 300 ntBASIC1.03□□□□□ -2.24
Cd40lgP27548 Gm45313-201ENSMUST00000210584 178 ntBASIC1.03□□□□□ -2.24
Cd40lgP27548 CT954323.1-201ENSMUST00000222774 229 ntBASIC1.03□□□□□ -2.24
Cd40lgP27548 Gm24494-201ENSMUST00000083804 81 ntBASIC1.03□□□□□ -2.24
Cd40lgP27548 Gm22149-201ENSMUST00000104442 136 ntBASIC1.02□□□□□ -2.25
Cd40lgP27548 Gm23101-201ENSMUST00000157550 137 ntBASIC1.02□□□□□ -2.25
Cd40lgP27548 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.02□□□□□ -2.25
Cd40lgP27548 Gm24204-201ENSMUST00000082950 107 ntBASIC1.02□□□□□ -2.25
Cd40lgP27548 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
Cd40lgP27548 Gm22673-201ENSMUST00000104415 131 ntBASIC1.01□□□□□ -2.25
Cd40lgP27548 Gm26301-201ENSMUST00000104813 95 ntBASIC1.01□□□□□ -2.25
Cd40lgP27548 Gm22477-201ENSMUST00000122569 316 ntBASIC1.01□□□□□ -2.25
Cd40lgP27548 Gm23214-201ENSMUST00000122716 157 ntBASIC1.01□□□□□ -2.25
Cd40lgP27548 Gm22403-201ENSMUST00000174919 84 ntBASIC1.01□□□□□ -2.25
Cd40lgP27548 Gm42855-201ENSMUST00000197388 253 ntBASIC1.01□□□□□ -2.25
Cd40lgP27548 Gm45268-201ENSMUST00000210046 370 ntBASIC1.01□□□□□ -2.25
Cd40lgP27548 AC154328.1-201ENSMUST00000225875 307 ntBASIC1.01□□□□□ -2.25
Cd40lgP27548 Gm22421-201ENSMUST00000083058 107 ntBASIC1.01□□□□□ -2.25
Cd40lgP27548 Gm25627-201ENSMUST00000084003 153 ntBASIC1.01□□□□□ -2.25
Cd40lgP27548 Gm10222-201ENSMUST00000088336 294 ntBASIC1.01□□□□□ -2.25
Cd40lgP27548 AC164297.1-201ENSMUST00000224484 1561 ntBASIC1□□□□□ -2.25
Cd40lgP27548 Gm22785-201ENSMUST00000104087 132 ntBASIC1□□□□□ -2.25
Cd40lgP27548 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
Cd40lgP27548 Gm14923-201ENSMUST00000118270 155 ntBASIC1□□□□□ -2.25
Cd40lgP27548 Gm11904-201ENSMUST00000120562 248 ntBASIC1□□□□□ -2.25
Cd40lgP27548 Gm11334-201ENSMUST00000121969 156 ntBASIC1□□□□□ -2.25
Cd40lgP27548 Mir8119-201ENSMUST00000183371 129 ntBASIC1□□□□□ -2.25
Cd40lgP27548 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1□□□□□ -2.25
Cd40lgP27548 Gm44959-201ENSMUST00000209127 231 ntBASIC1□□□□□ -2.25
Cd40lgP27548 Gm18188-201ENSMUST00000219386 478 ntBASIC1□□□□□ -2.25
Cd40lgP27548 Gm25697-201ENSMUST00000082902 98 ntBASIC1□□□□□ -2.25
Cd40lgP27548 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1□□□□□ -2.25
Cd40lgP27548 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
Cd40lgP27548 Gm22097-201ENSMUST00000157929 278 ntBASIC0.99□□□□□ -2.25
Cd40lgP27548 Gm23665-201ENSMUST00000158054 62 ntBASIC0.99□□□□□ -2.25
Cd40lgP27548 Gm23898-201ENSMUST00000158111 103 ntBASIC0.99□□□□□ -2.25
Cd40lgP27548 Gm20923-201ENSMUST00000190009 319 ntBASIC0.99□□□□□ -2.25
Cd40lgP27548 Gm21088-201ENSMUST00000190875 316 ntBASIC0.99□□□□□ -2.25
Cd40lgP27548 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC0.99□□□□□ -2.25
Cd40lgP27548 AC154994.1-201ENSMUST00000217395 302 ntBASIC0.99□□□□□ -2.25
Cd40lgP27548 AC124182.1-201ENSMUST00000227091 321 ntBASIC0.99□□□□□ -2.25
Cd40lgP27548 Mir34a-201ENSMUST00000083559 102 ntBASIC0.99□□□□□ -2.25
Cd40lgP27548 Mir490-201ENSMUST00000093567 84 ntBASIC0.99□□□□□ -2.25
Cd40lgP27548 Mir669o-201ENSMUST00000103898 96 ntBASIC0.98□□□□□ -2.25
Cd40lgP27548 Gm14536-201ENSMUST00000118324 138 ntBASIC0.98□□□□□ -2.25
Cd40lgP27548 Gm15027-201ENSMUST00000120922 138 ntBASIC0.98□□□□□ -2.25
Cd40lgP27548 Gm25750-201ENSMUST00000175483 112 ntBASIC0.98□□□□□ -2.25
Cd40lgP27548 Mir1954-201ENSMUST00000175595 86 ntBASIC0.98□□□□□ -2.25
Cd40lgP27548 Gm27656-201ENSMUST00000185055 80 ntBASIC0.98□□□□□ -2.25
Cd40lgP27548 Gm20118-201ENSMUST00000187207 162 ntBASIC0.98□□□□□ -2.25
Cd40lgP27548 Igkv15-102-201ENSMUST00000197885 287 ntBASIC0.98□□□□□ -2.25
Cd40lgP27548 AC159896.1-201ENSMUST00000215264 215 ntBASIC0.98□□□□□ -2.25
Cd40lgP27548 Gm22884-201ENSMUST00000083127 140 ntBASIC0.98□□□□□ -2.25
Cd40lgP27548 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
Cd40lgP27548 Gm14914-201ENSMUST00000117576 2031 ntBASIC0.98□□□□□ -2.25
Cd40lgP27548 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC0.97□□□□□ -2.25
Cd40lgP27548 Gm24431-201ENSMUST00000104073 66 ntBASIC0.97□□□□□ -2.25
Cd40lgP27548 Gm25111-201ENSMUST00000116686 147 ntBASIC0.97□□□□□ -2.25
Cd40lgP27548 Gm24588-201ENSMUST00000116696 83 ntBASIC0.97□□□□□ -2.25
Cd40lgP27548 Gm23542-201ENSMUST00000158208 96 ntBASIC0.97□□□□□ -2.25
Cd40lgP27548 Gm23579-201ENSMUST00000158528 103 ntBASIC0.97□□□□□ -2.25
Cd40lgP27548 Gm22425-201ENSMUST00000158532 138 ntBASIC0.97□□□□□ -2.25
Cd40lgP27548 Gm22450-201ENSMUST00000179641 107 ntBASIC0.97□□□□□ -2.25
Cd40lgP27548 Gm23571-201ENSMUST00000180073 127 ntBASIC0.97□□□□□ -2.25
Cd40lgP27548 Gm25473-201ENSMUST00000180191 107 ntBASIC0.97□□□□□ -2.25
Cd40lgP27548 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
Cd40lgP27548 CT009696.1-201ENSMUST00000215745 256 ntBASIC0.97□□□□□ -2.25
Cd40lgP27548 CT010449.1-201ENSMUST00000220624 153 ntBASIC0.97□□□□□ -2.25
Cd40lgP27548 Gm24856-201ENSMUST00000082809 107 ntBASIC0.97□□□□□ -2.25
Cd40lgP27548 Snora19-201ENSMUST00000082962 132 ntBASIC0.97□□□□□ -2.25
Cd40lgP27548 Gm23658-201ENSMUST00000083233 132 ntBASIC0.97□□□□□ -2.25
Cd40lgP27548 Gm26071-201ENSMUST00000083261 107 ntBASIC0.97□□□□□ -2.25
Cd40lgP27548 Gm24453-201ENSMUST00000083346 76 ntBASIC0.97□□□□□ -2.25
Cd40lgP27548 Mir196b-201ENSMUST00000083509 85 ntBASIC0.97□□□□□ -2.25
Cd40lgP27548 Gm25683-201ENSMUST00000083940 131 ntBASIC0.97□□□□□ -2.25
Cd40lgP27548 Gm24521-201ENSMUST00000083958 107 ntBASIC0.97□□□□□ -2.25
Cd40lgP27548 Gm22003-201ENSMUST00000101885 107 ntBASIC0.96□□□□□ -2.26
Cd40lgP27548 Gm11792-201ENSMUST00000120640 168 ntBASIC0.96□□□□□ -2.26
Cd40lgP27548 Gm25663-201ENSMUST00000157698 135 ntBASIC0.96□□□□□ -2.26
Cd40lgP27548 Gm25976-201ENSMUST00000158695 130 ntBASIC0.96□□□□□ -2.26
Cd40lgP27548 Gm23410-201ENSMUST00000179967 107 ntBASIC0.96□□□□□ -2.26
Cd40lgP27548 Gm22756-201ENSMUST00000180118 107 ntBASIC0.96□□□□□ -2.26
Cd40lgP27548 Gm27668-201ENSMUST00000184188 120 ntBASIC0.96□□□□□ -2.26
Cd40lgP27548 Gm27747-201ENSMUST00000184707 85 ntBASIC0.96□□□□□ -2.26
Cd40lgP27548 Mir6540-201ENSMUST00000184886 108 ntBASIC0.96□□□□□ -2.26
Cd40lgP27548 Gm28921-201ENSMUST00000190219 378 ntBASIC0.96□□□□□ -2.26
Cd40lgP27548 Gm43563-201ENSMUST00000196761 198 ntBASIC0.96□□□□□ -2.26
Cd40lgP27548 Gm44055-201ENSMUST00000204376 247 ntBASIC0.96□□□□□ -2.26
Cd40lgP27548 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC0.96□□□□□ -2.26
Cd40lgP27548 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
Retrieved 100 of 76,532 protein–RNA pairs in 157.8 ms