Protein–RNA interactions for Protein: P15409

Rho, Rhodopsin, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RhoP15409 Gm25825-201ENSMUST00000157091 124 ntBASIC1.98□□□□□ -2.09
RhoP15409 Gm23665-201ENSMUST00000158054 62 ntBASIC1.98□□□□□ -2.09
RhoP15409 Gm44326-201ENSMUST00000198226 101 ntBASIC1.98□□□□□ -2.09
RhoP15409 Gm18213-201ENSMUST00000207850 178 ntBASIC1.98□□□□□ -2.09
RhoP15409 Gm44938-201ENSMUST00000208614 427 ntBASIC1.98□□□□□ -2.09
RhoP15409 AC129085.5-201ENSMUST00000225468 400 ntBASIC1.98□□□□□ -2.09
RhoP15409 AC168062.3-201ENSMUST00000227025 165 ntBASIC1.98□□□□□ -2.09
RhoP15409 Snord118-201ENSMUST00000082965 135 ntBASIC1.98□□□□□ -2.09
RhoP15409 Gm24536-201ENSMUST00000083144 107 ntBASIC1.98□□□□□ -2.09
RhoP15409 Gm43877-201ENSMUST00000205029 2238 ntBASIC1.98□□□□□ -2.09
RhoP15409 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
RhoP15409 Gm22148-201ENSMUST00000104445 107 ntBASIC1.97□□□□□ -2.09
RhoP15409 Gm26097-201ENSMUST00000179642 93 ntBASIC1.97□□□□□ -2.09
RhoP15409 Mir7679-201ENSMUST00000183379 63 ntBASIC1.97□□□□□ -2.09
RhoP15409 Mir21b-201ENSMUST00000184317 108 ntBASIC1.97□□□□□ -2.09
RhoP15409 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.97□□□□□ -2.09
RhoP15409 AC160984.1-201ENSMUST00000225855 3154 ntBASIC1.97□□□□□ -2.09
RhoP15409 Gm21940-201ENSMUST00000204940 2278 ntBASIC1.96□□□□□ -2.1
RhoP15409 Gm24907-201ENSMUST00000116932 128 ntBASIC1.96□□□□□ -2.1
RhoP15409 Gm22557-201ENSMUST00000157804 102 ntBASIC1.96□□□□□ -2.1
RhoP15409 Gm25716-201ENSMUST00000158628 104 ntBASIC1.96□□□□□ -2.1
RhoP15409 Gm24634-201ENSMUST00000158672 107 ntBASIC1.96□□□□□ -2.1
RhoP15409 Gm16404-201ENSMUST00000177739 468 ntBASIC1.96□□□□□ -2.1
RhoP15409 Gm14598-201ENSMUST00000180109 468 ntBASIC1.96□□□□□ -2.1
RhoP15409 Gm14625-201ENSMUST00000180231 468 ntBASIC1.96□□□□□ -2.1
RhoP15409 Gm27898-201ENSMUST00000183987 80 ntBASIC1.96□□□□□ -2.1
RhoP15409 Mir6352-201ENSMUST00000184495 116 ntBASIC1.96□□□□□ -2.1
RhoP15409 Mir3961-201ENSMUST00000198795 59 ntBASIC1.96□□□□□ -2.1
RhoP15409 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC1.96□□□□□ -2.1
RhoP15409 AC154282.1-201ENSMUST00000223154 265 ntBASIC1.96□□□□□ -2.1
RhoP15409 Gm22686-201ENSMUST00000082847 100 ntBASIC1.96□□□□□ -2.1
RhoP15409 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
RhoP15409 Gm19194-201ENSMUST00000192015 3774 ntBASIC1.95□□□□□ -2.1
RhoP15409 Gm6952-201ENSMUST00000118629 159 ntBASIC1.95□□□□□ -2.1
RhoP15409 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC1.95□□□□□ -2.1
RhoP15409 Gm23718-201ENSMUST00000157350 307 ntBASIC1.95□□□□□ -2.1
RhoP15409 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
RhoP15409 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.95□□□□□ -2.1
RhoP15409 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
RhoP15409 Gm29604-201ENSMUST00000187176 163 ntBASIC1.95□□□□□ -2.1
RhoP15409 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC1.95□□□□□ -2.1
RhoP15409 Gm44308-201ENSMUST00000197080 99 ntBASIC1.95□□□□□ -2.1
RhoP15409 Gm25820-201ENSMUST00000198589 127 ntBASIC1.95□□□□□ -2.1
RhoP15409 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC1.95□□□□□ -2.1
RhoP15409 Snord43-201ENSMUST00000199549 108 ntBASIC1.95□□□□□ -2.1
RhoP15409 AC150901.1-201ENSMUST00000208407 145 ntBASIC1.95□□□□□ -2.1
RhoP15409 AC154994.1-201ENSMUST00000217395 302 ntBASIC1.95□□□□□ -2.1
RhoP15409 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.95□□□□□ -2.1
RhoP15409 AC165138.1-201ENSMUST00000226984 270 ntBASIC1.95□□□□□ -2.1
RhoP15409 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
RhoP15409 Mir293-201ENSMUST00000104841 80 ntBASIC1.94□□□□□ -2.1
RhoP15409 Gm13922-201ENSMUST00000119505 156 ntBASIC1.94□□□□□ -2.1
RhoP15409 Gm15281-201ENSMUST00000125181 351 ntBASIC1.94□□□□□ -2.1
RhoP15409 Gm23854-201ENSMUST00000158378 108 ntBASIC1.94□□□□□ -2.1
RhoP15409 Trav5n-3-201ENSMUST00000164511 270 ntBASIC1.94□□□□□ -2.1
RhoP15409 Gm22699-201ENSMUST00000175376 105 ntBASIC1.94□□□□□ -2.1
RhoP15409 Mir7678-201ENSMUST00000185076 71 ntBASIC1.94□□□□□ -2.1
RhoP15409 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC1.94□□□□□ -2.1
RhoP15409 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC1.94□□□□□ -2.1
RhoP15409 AC154328.1-201ENSMUST00000225875 307 ntBASIC1.94□□□□□ -2.1
RhoP15409 AC127371.3-201ENSMUST00000228129 415 ntBASIC1.94□□□□□ -2.1
RhoP15409 Gm25081-201ENSMUST00000082534 108 ntBASIC1.94□□□□□ -2.1
RhoP15409 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
RhoP15409 Gm23653-201ENSMUST00000116751 97 ntBASIC1.93□□□□□ -2.1
RhoP15409 Gm26403-201ENSMUST00000158500 105 ntBASIC1.93□□□□□ -2.1
RhoP15409 Gm16546-201ENSMUST00000159442 355 ntBASIC1.93□□□□□ -2.1
RhoP15409 Gm24333-201ENSMUST00000175101 84 ntBASIC1.93□□□□□ -2.1
RhoP15409 Gm27979-201ENSMUST00000185126 56 ntBASIC1.93□□□□□ -2.1
RhoP15409 Gm37693-201ENSMUST00000194562 234 ntBASIC1.93□□□□□ -2.1
RhoP15409 Gm43865-201ENSMUST00000204721 127 ntBASIC1.93□□□□□ -2.1
RhoP15409 AC158982.2-201ENSMUST00000226283 184 ntBASIC1.93□□□□□ -2.1
RhoP15409 Mir301-201ENSMUST00000083655 86 ntBASIC1.93□□□□□ -2.1
RhoP15409 Gm24375-201ENSMUST00000104397 132 ntBASIC1.92□□□□□ -2.1
RhoP15409 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.92□□□□□ -2.1
RhoP15409 Gm22556-201ENSMUST00000157803 100 ntBASIC1.92□□□□□ -2.1
RhoP15409 Gm26160-201ENSMUST00000158965 63 ntBASIC1.92□□□□□ -2.1
RhoP15409 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC1.92□□□□□ -2.1
RhoP15409 Gm27722-201ENSMUST00000183908 76 ntBASIC1.92□□□□□ -2.1
RhoP15409 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
RhoP15409 AC098718.1-201ENSMUST00000226166 175 ntBASIC1.92□□□□□ -2.1
RhoP15409 Gm43473-201ENSMUST00000200442 5997 ntBASIC1.92□□□□□ -2.1
RhoP15409 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.92□□□□□ -2.1
RhoP15409 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.91□□□□□ -2.1
RhoP15409 Gm23469-201ENSMUST00000157131 104 ntBASIC1.91□□□□□ -2.1
RhoP15409 Gm23390-201ENSMUST00000157393 106 ntBASIC1.91□□□□□ -2.1
RhoP15409 Gm24638-201ENSMUST00000179807 132 ntBASIC1.91□□□□□ -2.1
RhoP15409 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.91□□□□□ -2.1
RhoP15409 AC192091.2-201ENSMUST00000217869 117 ntBASIC1.91□□□□□ -2.1
RhoP15409 AC134601.1-201ENSMUST00000221058 109 ntBASIC1.91□□□□□ -2.1
RhoP15409 AC151902.2-201ENSMUST00000226419 301 ntBASIC1.91□□□□□ -2.1
RhoP15409 Mir151-201ENSMUST00000083678 68 ntBASIC1.91□□□□□ -2.1
RhoP15409 Snora33-201ENSMUST00000093556 129 ntBASIC1.91□□□□□ -2.1
RhoP15409 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
RhoP15409 Gm25884-201ENSMUST00000157782 62 ntBASIC1.9□□□□□ -2.11
RhoP15409 Gm23350-201ENSMUST00000158429 103 ntBASIC1.9□□□□□ -2.11
RhoP15409 Mir6350-201ENSMUST00000183639 105 ntBASIC1.9□□□□□ -2.11
RhoP15409 Gm29308-201ENSMUST00000188863 315 ntBASIC1.9□□□□□ -2.11
RhoP15409 Gm28537-201ENSMUST00000189026 315 ntBASIC1.9□□□□□ -2.11
RhoP15409 Gm29631-201ENSMUST00000191065 315 ntBASIC1.9□□□□□ -2.11
RhoP15409 Gm42623-201ENSMUST00000197225 379 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 90.6 ms