Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Mir411-201ENSMUST00000083543 82 ntBASIC3.18□□□□□ -1.9
Msx1P13297 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC3.18□□□□□ -1.9
Msx1P13297 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.18□□□□□ -1.9
Msx1P13297 Gm37566-201ENSMUST00000192363 4355 ntBASIC3.18□□□□□ -1.9
Msx1P13297 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Msx1P13297 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Msx1P13297 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
Msx1P13297 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC3.17□□□□□ -1.9
Msx1P13297 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Msx1P13297 Gm26077-201ENSMUST00000104064 123 ntBASIC3.17□□□□□ -1.9
Msx1P13297 Gm16021-201ENSMUST00000121176 219 ntBASIC3.17□□□□□ -1.9
Msx1P13297 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Msx1P13297 Gm37085-201ENSMUST00000193780 196 ntBASIC3.17□□□□□ -1.9
Msx1P13297 Gm43239-201ENSMUST00000200131 201 ntBASIC3.17□□□□□ -1.9
Msx1P13297 Gm14917-201ENSMUST00000118872 2105 ntBASIC3.17□□□□□ -1.9
Msx1P13297 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.17□□□□□ -1.9
Msx1P13297 Gm43879-201ENSMUST00000203811 3760 ntBASIC3.16□□□□□ -1.9
Msx1P13297 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
Msx1P13297 Gm23668-201ENSMUST00000157465 111 ntBASIC3.16□□□□□ -1.9
Msx1P13297 Mir5619-201ENSMUST00000176065 61 ntBASIC3.16□□□□□ -1.9
Msx1P13297 Gm23190-201ENSMUST00000180307 64 ntBASIC3.16□□□□□ -1.9
Msx1P13297 Mir6353-201ENSMUST00000183596 113 ntBASIC3.16□□□□□ -1.9
Msx1P13297 Gm44223-201ENSMUST00000204854 114 ntBASIC3.16□□□□□ -1.9
Msx1P13297 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC3.16□□□□□ -1.9
Msx1P13297 Snord35b-201ENSMUST00000082833 87 ntBASIC3.16□□□□□ -1.9
Msx1P13297 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.16□□□□□ -1.9
Msx1P13297 Gm8935-201ENSMUST00000066794 2798 ntBASIC3.16□□□□□ -1.9
Msx1P13297 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Msx1P13297 AC153950.1-201ENSMUST00000219916 3238 ntBASIC3.15□□□□□ -1.9
Msx1P13297 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Msx1P13297 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
Msx1P13297 Gm23237-201ENSMUST00000104639 92 ntBASIC3.15□□□□□ -1.91
Msx1P13297 Gm23838-201ENSMUST00000158067 162 ntBASIC3.15□□□□□ -1.91
Msx1P13297 Gm22731-201ENSMUST00000158086 94 ntBASIC3.15□□□□□ -1.91
Msx1P13297 Gm25373-201ENSMUST00000158156 115 ntBASIC3.15□□□□□ -1.91
Msx1P13297 Gm25370-201ENSMUST00000158159 94 ntBASIC3.15□□□□□ -1.91
Msx1P13297 Gm24345-201ENSMUST00000158706 124 ntBASIC3.15□□□□□ -1.91
Msx1P13297 Gm45268-201ENSMUST00000210046 370 ntBASIC3.15□□□□□ -1.91
Msx1P13297 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.15□□□□□ -1.91
Msx1P13297 AC168056.1-201ENSMUST00000225270 180 ntBASIC3.15□□□□□ -1.91
Msx1P13297 Gm23615-201ENSMUST00000082602 65 ntBASIC3.15□□□□□ -1.91
Msx1P13297 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
Msx1P13297 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
Msx1P13297 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Msx1P13297 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
Msx1P13297 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Msx1P13297 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
Msx1P13297 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Msx1P13297 n-R5s73-201ENSMUST00000122508 107 ntBASIC3.14□□□□□ -1.91
Msx1P13297 Gm23671-201ENSMUST00000157472 103 ntBASIC3.14□□□□□ -1.91
Msx1P13297 Gm44325-201ENSMUST00000196757 77 ntBASIC3.14□□□□□ -1.91
Msx1P13297 Gm25697-201ENSMUST00000082902 98 ntBASIC3.14□□□□□ -1.91
Msx1P13297 Gm24527-201ENSMUST00000082920 107 ntBASIC3.14□□□□□ -1.91
Msx1P13297 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Msx1P13297 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Msx1P13297 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Msx1P13297 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Msx1P13297 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.13□□□□□ -1.91
Msx1P13297 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Msx1P13297 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Msx1P13297 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.13□□□□□ -1.91
Msx1P13297 Gm16355-201ENSMUST00000128606 231 ntBASIC3.13□□□□□ -1.91
Msx1P13297 Gm25711-201ENSMUST00000158633 128 ntBASIC3.13□□□□□ -1.91
Msx1P13297 Gm27415-201ENSMUST00000183720 95 ntBASIC3.13□□□□□ -1.91
Msx1P13297 Mir6916-201ENSMUST00000184514 63 ntBASIC3.13□□□□□ -1.91
Msx1P13297 Mir6376-201ENSMUST00000185149 131 ntBASIC3.13□□□□□ -1.91
Msx1P13297 Gm37007-201ENSMUST00000194234 319 ntBASIC3.13□□□□□ -1.91
Msx1P13297 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC3.13□□□□□ -1.91
Msx1P13297 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Msx1P13297 Gm43032-201ENSMUST00000197967 3123 ntBASIC3.13□□□□□ -1.91
Msx1P13297 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
Msx1P13297 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.12□□□□□ -1.91
Msx1P13297 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
Msx1P13297 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Msx1P13297 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Msx1P13297 Gm22672-201ENSMUST00000104414 134 ntBASIC3.12□□□□□ -1.91
Msx1P13297 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC3.12□□□□□ -1.91
Msx1P13297 Gm23351-201ENSMUST00000158427 125 ntBASIC3.12□□□□□ -1.91
Msx1P13297 Gm23380-201ENSMUST00000158448 103 ntBASIC3.12□□□□□ -1.91
Msx1P13297 Gm26214-201ENSMUST00000158581 107 ntBASIC3.12□□□□□ -1.91
Msx1P13297 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Msx1P13297 Mir7118-201ENSMUST00000197760 61 ntBASIC3.12□□□□□ -1.91
Msx1P13297 AC126691.1-201ENSMUST00000226534 202 ntBASIC3.12□□□□□ -1.91
Msx1P13297 Gm22249-201ENSMUST00000082485 136 ntBASIC3.12□□□□□ -1.91
Msx1P13297 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Msx1P13297 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Msx1P13297 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
Msx1P13297 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Msx1P13297 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Msx1P13297 Gm13136-201ENSMUST00000121031 2950 ntBASIC3.11□□□□□ -1.91
Msx1P13297 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Msx1P13297 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Msx1P13297 Gm26339-201ENSMUST00000102368 99 ntBASIC3.11□□□□□ -1.91
Msx1P13297 Gm25485-201ENSMUST00000104120 132 ntBASIC3.11□□□□□ -1.91
Msx1P13297 n-R5s39-201ENSMUST00000122613 108 ntBASIC3.11□□□□□ -1.91
Msx1P13297 Gm22910-201ENSMUST00000178568 132 ntBASIC3.11□□□□□ -1.91
Msx1P13297 Gm18486-201ENSMUST00000184040 298 ntBASIC3.11□□□□□ -1.91
Msx1P13297 Gm42807-201ENSMUST00000200141 329 ntBASIC3.11□□□□□ -1.91
Msx1P13297 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Msx1P13297 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.11□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 186.2 ms