Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm23759-201ENSMUST00000158351 268 ntBASIC0.76□□□□□ -2.29
Lire1P11260 Gm22888-201ENSMUST00000158640 77 ntBASIC0.76□□□□□ -2.29
Lire1P11260 Mir1961-201ENSMUST00000158643 112 ntBASIC0.76□□□□□ -2.29
Lire1P11260 Gm26022-201ENSMUST00000158663 108 ntBASIC0.76□□□□□ -2.29
Lire1P11260 Gm20391-201ENSMUST00000174722 106 ntBASIC0.76□□□□□ -2.29
Lire1P11260 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC0.76□□□□□ -2.29
Lire1P11260 Gm34783-201ENSMUST00000209159 303 ntBASIC0.76□□□□□ -2.29
Lire1P11260 Gm25929-201ENSMUST00000082784 107 ntBASIC0.76□□□□□ -2.29
Lire1P11260 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
Lire1P11260 Gm14980-201ENSMUST00000121247 736 ntBASIC0.75□□□□□ -2.29
Lire1P11260 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
Lire1P11260 Gm25901-201ENSMUST00000158494 130 ntBASIC0.75□□□□□ -2.29
Lire1P11260 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.75□□□□□ -2.29
Lire1P11260 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC0.75□□□□□ -2.29
Lire1P11260 Gm23126-201ENSMUST00000104260 134 ntBASIC0.74□□□□□ -2.29
Lire1P11260 Gm25378-201ENSMUST00000104333 129 ntBASIC0.74□□□□□ -2.29
Lire1P11260 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC0.74□□□□□ -2.29
Lire1P11260 Gm23492-201ENSMUST00000116837 115 ntBASIC0.74□□□□□ -2.29
Lire1P11260 Gm13518-201ENSMUST00000120018 233 ntBASIC0.74□□□□□ -2.29
Lire1P11260 Gm24595-201ENSMUST00000122501 110 ntBASIC0.74□□□□□ -2.29
Lire1P11260 Gm25982-201ENSMUST00000157920 101 ntBASIC0.74□□□□□ -2.29
Lire1P11260 Snora24-201ENSMUST00000174989 130 ntBASIC0.74□□□□□ -2.29
Lire1P11260 Gm25949-201ENSMUST00000175333 114 ntBASIC0.74□□□□□ -2.29
Lire1P11260 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC0.74□□□□□ -2.29
Lire1P11260 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC0.74□□□□□ -2.29
Lire1P11260 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC0.74□□□□□ -2.29
Lire1P11260 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC0.74□□□□□ -2.29
Lire1P11260 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC0.74□□□□□ -2.29
Lire1P11260 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC0.74□□□□□ -2.29
Lire1P11260 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC0.74□□□□□ -2.29
Lire1P11260 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC0.74□□□□□ -2.29
Lire1P11260 Gm27317-201ENSMUST00000183533 95 ntBASIC0.74□□□□□ -2.29
Lire1P11260 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
Lire1P11260 Mir7079-201ENSMUST00000184697 69 ntBASIC0.74□□□□□ -2.29
Lire1P11260 Gm20923-201ENSMUST00000190009 319 ntBASIC0.74□□□□□ -2.29
Lire1P11260 Gm21088-201ENSMUST00000190875 316 ntBASIC0.74□□□□□ -2.29
Lire1P11260 Gm37338-201ENSMUST00000191986 127 ntBASIC0.74□□□□□ -2.29
Lire1P11260 Gm44352-201ENSMUST00000196358 110 ntBASIC0.74□□□□□ -2.29
Lire1P11260 Gm24323-201ENSMUST00000175342 77 ntBASIC0.73□□□□□ -2.29
Lire1P11260 Gm25671-201ENSMUST00000178612 105 ntBASIC0.73□□□□□ -2.29
Lire1P11260 Gm23307-201ENSMUST00000179167 105 ntBASIC0.73□□□□□ -2.29
Lire1P11260 Gm25286-201ENSMUST00000179790 105 ntBASIC0.73□□□□□ -2.29
Lire1P11260 Mir7093-201ENSMUST00000184195 101 ntBASIC0.73□□□□□ -2.29
Lire1P11260 Gm28435-201ENSMUST00000185496 108 ntBASIC0.73□□□□□ -2.29
Lire1P11260 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC0.73□□□□□ -2.29
Lire1P11260 Mir465d-201ENSMUST00000196314 58 ntBASIC0.73□□□□□ -2.29
Lire1P11260 Rny3-201ENSMUST00000083011 102 ntBASIC0.73□□□□□ -2.29
Lire1P11260 Gm14536-201ENSMUST00000118324 138 ntBASIC0.72□□□□□ -2.29
Lire1P11260 Gm15027-201ENSMUST00000120922 138 ntBASIC0.72□□□□□ -2.29
Lire1P11260 Gm12785-201ENSMUST00000122052 172 ntBASIC0.72□□□□□ -2.29
Lire1P11260 Gm24909-201ENSMUST00000157290 280 ntBASIC0.72□□□□□ -2.29
Lire1P11260 Gm22200-201ENSMUST00000158614 67 ntBASIC0.72□□□□□ -2.29
Lire1P11260 Gm24678-201ENSMUST00000158756 104 ntBASIC0.72□□□□□ -2.29
Lire1P11260 Gm23474-201ENSMUST00000158884 75 ntBASIC0.72□□□□□ -2.29
Lire1P11260 Gm36956-201ENSMUST00000193830 214 ntBASIC0.72□□□□□ -2.29
Lire1P11260 Gm23039-201ENSMUST00000083870 161 ntBASIC0.72□□□□□ -2.29
Lire1P11260 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.72□□□□□ -2.29
Lire1P11260 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.29
Lire1P11260 Gm24579-201ENSMUST00000103964 144 ntBASIC0.71□□□□□ -2.3
Lire1P11260 Gm13711-201ENSMUST00000119708 453 ntBASIC0.71□□□□□ -2.3
Lire1P11260 Gm25781-201ENSMUST00000122527 84 ntBASIC0.71□□□□□ -2.3
Lire1P11260 Gm37763-201ENSMUST00000193445 120 ntBASIC0.71□□□□□ -2.3
Lire1P11260 Gm44052-201ENSMUST00000203382 396 ntBASIC0.71□□□□□ -2.3
Lire1P11260 Gm22796-201ENSMUST00000157234 106 ntBASIC0.7□□□□□ -2.3
Lire1P11260 Gm24211-201ENSMUST00000158264 107 ntBASIC0.7□□□□□ -2.3
Lire1P11260 Gm23113-201ENSMUST00000158477 99 ntBASIC0.7□□□□□ -2.3
Lire1P11260 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC0.7□□□□□ -2.3
Lire1P11260 Gm20630-201ENSMUST00000177387 551 ntBASIC0.7□□□□□ -2.3
Lire1P11260 Gm6105-201ENSMUST00000200580 624 ntBASIC0.7□□□□□ -2.3
Lire1P11260 AC159619.2-201ENSMUST00000222924 401 ntBASIC0.7□□□□□ -2.3
Lire1P11260 AC165092.3-201ENSMUST00000223602 282 ntBASIC0.7□□□□□ -2.3
Lire1P11260 n-R5s94-201ENSMUST00000082573 119 ntBASIC0.7□□□□□ -2.3
Lire1P11260 Mir654-201ENSMUST00000104787 84 ntBASIC0.69□□□□□ -2.3
Lire1P11260 Gm12647-201ENSMUST00000118977 265 ntBASIC0.69□□□□□ -2.3
Lire1P11260 Gm13560-201ENSMUST00000121865 329 ntBASIC0.69□□□□□ -2.3
Lire1P11260 Gm14298-201ENSMUST00000139032 237 ntBASIC0.69□□□□□ -2.3
Lire1P11260 Gm16356-201ENSMUST00000143300 169 ntBASIC0.69□□□□□ -2.3
Lire1P11260 Gm23779-201ENSMUST00000157938 64 ntBASIC0.69□□□□□ -2.3
Lire1P11260 Gm23262-201ENSMUST00000158323 168 ntBASIC0.69□□□□□ -2.3
Lire1P11260 Mir468-201ENSMUST00000197332 78 ntBASIC0.69□□□□□ -2.3
Lire1P11260 Gm44462-201ENSMUST00000199696 129 ntBASIC0.69□□□□□ -2.3
Lire1P11260 Snord42a-201ENSMUST00000082606 65 ntBASIC0.69□□□□□ -2.3
Lire1P11260 Gm25937-201ENSMUST00000083912 107 ntBASIC0.69□□□□□ -2.3
Lire1P11260 Gm26107-201ENSMUST00000083972 107 ntBASIC0.69□□□□□ -2.3
Lire1P11260 Gm23783-201ENSMUST00000157941 102 ntBASIC0.68□□□□□ -2.3
Lire1P11260 Gm22085-201ENSMUST00000158344 110 ntBASIC0.68□□□□□ -2.3
Lire1P11260 Gm25161-201ENSMUST00000158913 132 ntBASIC0.68□□□□□ -2.3
Lire1P11260 Mir376a-201ENSMUST00000197584 68 ntBASIC0.68□□□□□ -2.3
Lire1P11260 AC154296.2-201ENSMUST00000214696 545 ntBASIC0.68□□□□□ -2.3
Lire1P11260 Gm22809-201ENSMUST00000082743 156 ntBASIC0.68□□□□□ -2.3
Lire1P11260 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
Lire1P11260 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
Lire1P11260 Mir709-201ENSMUST00000102190 88 ntBASIC0.67□□□□□ -2.3
Lire1P11260 Gm11834-201ENSMUST00000122257 585 ntBASIC0.67□□□□□ -2.3
Lire1P11260 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
Lire1P11260 Gm24192-201ENSMUST00000157978 145 ntBASIC0.67□□□□□ -2.3
Lire1P11260 Mir1931-201ENSMUST00000158589 119 ntBASIC0.67□□□□□ -2.3
Lire1P11260 Gm28849-201ENSMUST00000188127 174 ntBASIC0.67□□□□□ -2.3
Lire1P11260 Gm28330-201ENSMUST00000190353 171 ntBASIC0.67□□□□□ -2.3
Lire1P11260 AC116589.4-201ENSMUST00000222390 216 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms