Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm44524-201ENSMUST00000203899 271 ntBASIC2□□□□□ -2.09
Col3a1P08121 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
Col3a1P08121 AC135292.1-201ENSMUST00000227665 204 ntBASIC2□□□□□ -2.09
Col3a1P08121 mt-Tt-201ENSMUST00000082422 67 ntBASIC2□□□□□ -2.09
Col3a1P08121 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.99□□□□□ -2.09
Col3a1P08121 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC1.99□□□□□ -2.09
Col3a1P08121 Gm22658-201ENSMUST00000104196 155 ntBASIC1.99□□□□□ -2.09
Col3a1P08121 Gm24283-201ENSMUST00000104233 107 ntBASIC1.99□□□□□ -2.09
Col3a1P08121 Gm24717-201ENSMUST00000157522 124 ntBASIC1.99□□□□□ -2.09
Col3a1P08121 Gm24902-201ENSMUST00000158126 123 ntBASIC1.99□□□□□ -2.09
Col3a1P08121 Gm25069-201ENSMUST00000175238 86 ntBASIC1.99□□□□□ -2.09
Col3a1P08121 Gm26265-202ENSMUST00000196326 133 ntBASIC1.99□□□□□ -2.09
Col3a1P08121 Mir3969-201ENSMUST00000197106 92 ntBASIC1.99□□□□□ -2.09
Col3a1P08121 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC1.99□□□□□ -2.09
Col3a1P08121 Gm22509-201ENSMUST00000082775 107 ntBASIC1.99□□□□□ -2.09
Col3a1P08121 Gm26327-201ENSMUST00000093724 111 ntBASIC1.99□□□□□ -2.09
Col3a1P08121 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
Col3a1P08121 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Col3a1P08121 Gm24582-201ENSMUST00000103967 103 ntBASIC1.98□□□□□ -2.09
Col3a1P08121 Snord89-201ENSMUST00000104516 110 ntBASIC1.98□□□□□ -2.09
Col3a1P08121 Gm26249-201ENSMUST00000116708 118 ntBASIC1.98□□□□□ -2.09
Col3a1P08121 Gm15861-201ENSMUST00000120979 339 ntBASIC1.98□□□□□ -2.09
Col3a1P08121 Mir3968-201ENSMUST00000175355 100 ntBASIC1.98□□□□□ -2.09
Col3a1P08121 Hmga1b-202ENSMUST00000178955 120 ntBASIC1.98□□□□□ -2.09
Col3a1P08121 Mir6399-201ENSMUST00000184050 84 ntBASIC1.98□□□□□ -2.09
Col3a1P08121 Gm34139-201ENSMUST00000196166 294 ntBASIC1.98□□□□□ -2.09
Col3a1P08121 Gm43993-201ENSMUST00000203972 247 ntBASIC1.98□□□□□ -2.09
Col3a1P08121 CT030159.4-201ENSMUST00000221966 395 ntBASIC1.98□□□□□ -2.09
Col3a1P08121 AC122834.1-201ENSMUST00000227182 425 ntBASIC1.98□□□□□ -2.09
Col3a1P08121 Gm22576-201ENSMUST00000083733 104 ntBASIC1.98□□□□□ -2.09
Col3a1P08121 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.97□□□□□ -2.09
Col3a1P08121 Gm12513-201ENSMUST00000118617 352 ntBASIC1.97□□□□□ -2.09
Col3a1P08121 Gm12086-201ENSMUST00000120863 228 ntBASIC1.97□□□□□ -2.09
Col3a1P08121 Gm23101-201ENSMUST00000157550 137 ntBASIC1.97□□□□□ -2.09
Col3a1P08121 Gm24770-201ENSMUST00000158505 92 ntBASIC1.97□□□□□ -2.09
Col3a1P08121 Gm27793-201ENSMUST00000183405 76 ntBASIC1.97□□□□□ -2.09
Col3a1P08121 Mir6370-201ENSMUST00000183510 120 ntBASIC1.97□□□□□ -2.09
Col3a1P08121 Gm42834-201ENSMUST00000196845 256 ntBASIC1.97□□□□□ -2.09
Col3a1P08121 AC134601.1-201ENSMUST00000221058 109 ntBASIC1.97□□□□□ -2.09
Col3a1P08121 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC1.97□□□□□ -2.09
Col3a1P08121 AC120540.2-201ENSMUST00000221716 387 ntBASIC1.97□□□□□ -2.09
Col3a1P08121 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.97□□□□□ -2.09
Col3a1P08121 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
Col3a1P08121 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.96□□□□□ -2.1
Col3a1P08121 Gm26135-201ENSMUST00000101993 72 ntBASIC1.96□□□□□ -2.1
Col3a1P08121 Gm12351-201ENSMUST00000118727 292 ntBASIC1.96□□□□□ -2.1
Col3a1P08121 Gm6025-201ENSMUST00000121517 201 ntBASIC1.96□□□□□ -2.1
Col3a1P08121 Gm24892-201ENSMUST00000122747 104 ntBASIC1.96□□□□□ -2.1
Col3a1P08121 Gm2830-201ENSMUST00000140330 385 ntBASIC1.96□□□□□ -2.1
Col3a1P08121 Gm26099-201ENSMUST00000157248 109 ntBASIC1.96□□□□□ -2.1
Col3a1P08121 Gm24783-201ENSMUST00000157639 100 ntBASIC1.96□□□□□ -2.1
Col3a1P08121 Gm27396-201ENSMUST00000157708 58 ntBASIC1.96□□□□□ -2.1
Col3a1P08121 Gm16289-201ENSMUST00000162079 183 ntBASIC1.96□□□□□ -2.1
Col3a1P08121 Gm25380-201ENSMUST00000175463 107 ntBASIC1.96□□□□□ -2.1
Col3a1P08121 Gm24641-201ENSMUST00000178055 107 ntBASIC1.96□□□□□ -2.1
Col3a1P08121 Gm25484-201ENSMUST00000178217 107 ntBASIC1.96□□□□□ -2.1
Col3a1P08121 Snord50b-201ENSMUST00000178497 72 ntBASIC1.96□□□□□ -2.1
Col3a1P08121 Gm26138-201ENSMUST00000179236 107 ntBASIC1.96□□□□□ -2.1
Col3a1P08121 Gm22821-201ENSMUST00000179288 107 ntBASIC1.96□□□□□ -2.1
Col3a1P08121 Trav5-2-201ENSMUST00000199855 280 ntBASIC1.96□□□□□ -2.1
Col3a1P08121 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.96□□□□□ -2.1
Col3a1P08121 Gm23140-201ENSMUST00000082487 107 ntBASIC1.96□□□□□ -2.1
Col3a1P08121 Gm24461-201ENSMUST00000082735 103 ntBASIC1.96□□□□□ -2.1
Col3a1P08121 Gm23298-201ENSMUST00000083181 107 ntBASIC1.96□□□□□ -2.1
Col3a1P08121 Gm24614-201ENSMUST00000083269 107 ntBASIC1.96□□□□□ -2.1
Col3a1P08121 Gm22057-201ENSMUST00000083387 107 ntBASIC1.96□□□□□ -2.1
Col3a1P08121 Gm25516-201ENSMUST00000083857 107 ntBASIC1.96□□□□□ -2.1
Col3a1P08121 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
Col3a1P08121 Gm15314-201ENSMUST00000120740 1887 ntBASIC1.96□□□□□ -2.1
Col3a1P08121 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.95□□□□□ -2.1
Col3a1P08121 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC1.95□□□□□ -2.1
Col3a1P08121 Gm25464-201ENSMUST00000175481 107 ntBASIC1.95□□□□□ -2.1
Col3a1P08121 Mir7665-201ENSMUST00000184907 63 ntBASIC1.95□□□□□ -2.1
Col3a1P08121 Gm28409-201ENSMUST00000187064 103 ntBASIC1.95□□□□□ -2.1
Col3a1P08121 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC1.95□□□□□ -2.1
Col3a1P08121 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.95□□□□□ -2.1
Col3a1P08121 Gm22443-201ENSMUST00000082890 107 ntBASIC1.95□□□□□ -2.1
Col3a1P08121 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Col3a1P08121 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Col3a1P08121 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
Col3a1P08121 Gm11786-201ENSMUST00000120799 155 ntBASIC1.94□□□□□ -2.1
Col3a1P08121 Gm15115-201ENSMUST00000121145 264 ntBASIC1.94□□□□□ -2.1
Col3a1P08121 Gm23655-201ENSMUST00000122627 105 ntBASIC1.94□□□□□ -2.1
Col3a1P08121 Gm23434-201ENSMUST00000157179 100 ntBASIC1.94□□□□□ -2.1
Col3a1P08121 Gm22560-201ENSMUST00000157332 120 ntBASIC1.94□□□□□ -2.1
Col3a1P08121 Gm26405-201ENSMUST00000158495 100 ntBASIC1.94□□□□□ -2.1
Col3a1P08121 Gm29613-201ENSMUST00000185846 313 ntBASIC1.94□□□□□ -2.1
Col3a1P08121 Gm29544-201ENSMUST00000188860 313 ntBASIC1.94□□□□□ -2.1
Col3a1P08121 Gm28808-201ENSMUST00000190978 313 ntBASIC1.94□□□□□ -2.1
Col3a1P08121 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC1.94□□□□□ -2.1
Col3a1P08121 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
Col3a1P08121 Gm3081-201ENSMUST00000193413 3025 ntBASIC1.94□□□□□ -2.1
Col3a1P08121 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
Col3a1P08121 Gm25274-201ENSMUST00000104296 135 ntBASIC1.94□□□□□ -2.1
Col3a1P08121 Gm23202-201ENSMUST00000104376 129 ntBASIC1.94□□□□□ -2.1
Col3a1P08121 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC1.94□□□□□ -2.1
Col3a1P08121 Gm25393-201ENSMUST00000157336 285 ntBASIC1.94□□□□□ -2.1
Col3a1P08121 Gm22586-201ENSMUST00000157507 122 ntBASIC1.94□□□□□ -2.1
Col3a1P08121 Mir3068-202ENSMUST00000197755 79 ntBASIC1.94□□□□□ -2.1
Col3a1P08121 AC123709.1-201ENSMUST00000224848 345 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 150.7 ms