Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Gm24229-201ENSMUST00000158830 118 ntBASIC1.94□□□□□ -2.1
Best1O88870 Mir6406-201ENSMUST00000183592 120 ntBASIC1.94□□□□□ -2.1
Best1O88870 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.94□□□□□ -2.1
Best1O88870 AC129085.5-201ENSMUST00000225468 400 ntBASIC1.94□□□□□ -2.1
Best1O88870 Gm25038-201ENSMUST00000082928 130 ntBASIC1.94□□□□□ -2.1
Best1O88870 Gm22750-201ENSMUST00000102076 103 ntBASIC1.93□□□□□ -2.1
Best1O88870 Gm22545-201ENSMUST00000104350 132 ntBASIC1.93□□□□□ -2.1
Best1O88870 Gm22803-201ENSMUST00000158049 283 ntBASIC1.93□□□□□ -2.1
Best1O88870 Gm25494-201ENSMUST00000158143 100 ntBASIC1.93□□□□□ -2.1
Best1O88870 Gm24729-201ENSMUST00000158225 137 ntBASIC1.93□□□□□ -2.1
Best1O88870 Gm25834-201ENSMUST00000158916 101 ntBASIC1.93□□□□□ -2.1
Best1O88870 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC1.93□□□□□ -2.1
Best1O88870 Gm25820-202ENSMUST00000197479 128 ntBASIC1.93□□□□□ -2.1
Best1O88870 Gm45508-201ENSMUST00000209298 299 ntBASIC1.93□□□□□ -2.1
Best1O88870 Gm22743-201ENSMUST00000083445 133 ntBASIC1.93□□□□□ -2.1
Best1O88870 Snora69-201ENSMUST00000083708 131 ntBASIC1.93□□□□□ -2.1
Best1O88870 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Best1O88870 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.93□□□□□ -2.1
Best1O88870 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC1.92□□□□□ -2.1
Best1O88870 n-R5s188-201ENSMUST00000122646 105 ntBASIC1.92□□□□□ -2.1
Best1O88870 Gm23584-201ENSMUST00000157655 129 ntBASIC1.92□□□□□ -2.1
Best1O88870 Gm26004-201ENSMUST00000158804 116 ntBASIC1.92□□□□□ -2.1
Best1O88870 Gm28344-201ENSMUST00000185704 279 ntBASIC1.92□□□□□ -2.1
Best1O88870 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC1.92□□□□□ -2.1
Best1O88870 AC164612.2-202ENSMUST00000216314 253 ntBASIC1.92□□□□□ -2.1
Best1O88870 Mir490-201ENSMUST00000093567 84 ntBASIC1.92□□□□□ -2.1
Best1O88870 Gm23950-201ENSMUST00000104026 129 ntBASIC1.91□□□□□ -2.1
Best1O88870 Gm24171-201ENSMUST00000104126 131 ntBASIC1.91□□□□□ -2.1
Best1O88870 Gm6444-201ENSMUST00000119611 458 ntBASIC1.91□□□□□ -2.1
Best1O88870 Mir3061-201ENSMUST00000175129 91 ntBASIC1.91□□□□□ -2.1
Best1O88870 Mir7675-201ENSMUST00000184262 58 ntBASIC1.91□□□□□ -2.1
Best1O88870 Gm21064-202ENSMUST00000190583 278 ntBASIC1.91□□□□□ -2.1
Best1O88870 Gm45754-201ENSMUST00000212380 279 ntBASIC1.91□□□□□ -2.1
Best1O88870 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC1.91□□□□□ -2.1
Best1O88870 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC1.91□□□□□ -2.1
Best1O88870 Gm23951-201ENSMUST00000104029 132 ntBASIC1.9□□□□□ -2.11
Best1O88870 Gm24262-201ENSMUST00000157431 144 ntBASIC1.9□□□□□ -2.11
Best1O88870 Gm24478-201ENSMUST00000157439 158 ntBASIC1.9□□□□□ -2.11
Best1O88870 Gm44326-201ENSMUST00000198226 101 ntBASIC1.9□□□□□ -2.11
Best1O88870 Gm25895-201ENSMUST00000083714 100 ntBASIC1.9□□□□□ -2.11
Best1O88870 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Best1O88870 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Best1O88870 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Best1O88870 Mir653-201ENSMUST00000102402 85 ntBASIC1.89□□□□□ -2.11
Best1O88870 Mir758-201ENSMUST00000103260 81 ntBASIC1.89□□□□□ -2.11
Best1O88870 Gm24374-201ENSMUST00000104394 106 ntBASIC1.89□□□□□ -2.11
Best1O88870 Gm9251-201ENSMUST00000197202 628 ntBASIC1.89□□□□□ -2.11
Best1O88870 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.89□□□□□ -2.11
Best1O88870 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Best1O88870 Gm25390-201ENSMUST00000157341 103 ntBASIC1.88□□□□□ -2.11
Best1O88870 Mir669n-201ENSMUST00000158636 54 ntBASIC1.88□□□□□ -2.11
Best1O88870 Gm28669-201ENSMUST00000188400 100 ntBASIC1.88□□□□□ -2.11
Best1O88870 Gm37586-201ENSMUST00000193654 204 ntBASIC1.88□□□□□ -2.11
Best1O88870 Gm22884-201ENSMUST00000083127 140 ntBASIC1.88□□□□□ -2.11
Best1O88870 Gm24929-201ENSMUST00000083403 139 ntBASIC1.88□□□□□ -2.11
Best1O88870 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Best1O88870 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Best1O88870 Mir5104-201ENSMUST00000175319 94 ntBASIC1.87□□□□□ -2.11
Best1O88870 Gm29604-201ENSMUST00000187176 163 ntBASIC1.87□□□□□ -2.11
Best1O88870 Gm6003-201ENSMUST00000187903 463 ntBASIC1.87□□□□□ -2.11
Best1O88870 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC1.87□□□□□ -2.11
Best1O88870 AC129085.1-201ENSMUST00000225263 165 ntBASIC1.87□□□□□ -2.11
Best1O88870 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Best1O88870 Gm42664-201ENSMUST00000199417 3239 ntBASIC1.87□□□□□ -2.11
Best1O88870 Gm43877-201ENSMUST00000205029 2238 ntBASIC1.86□□□□□ -2.11
Best1O88870 Gm24132-201ENSMUST00000104745 91 ntBASIC1.86□□□□□ -2.11
Best1O88870 Gm23109-201ENSMUST00000116867 126 ntBASIC1.86□□□□□ -2.11
Best1O88870 Gm11334-201ENSMUST00000121969 156 ntBASIC1.86□□□□□ -2.11
Best1O88870 Gm26038-201ENSMUST00000158151 106 ntBASIC1.86□□□□□ -2.11
Best1O88870 Gm22888-201ENSMUST00000158640 77 ntBASIC1.86□□□□□ -2.11
Best1O88870 Gm24222-201ENSMUST00000158834 93 ntBASIC1.86□□□□□ -2.11
Best1O88870 Gm25750-201ENSMUST00000175483 112 ntBASIC1.86□□□□□ -2.11
Best1O88870 Gm22929-201ENSMUST00000175517 107 ntBASIC1.86□□□□□ -2.11
Best1O88870 AC122320.1-201ENSMUST00000227233 105 ntBASIC1.86□□□□□ -2.11
Best1O88870 Gm24523-201ENSMUST00000083965 132 ntBASIC1.86□□□□□ -2.11
Best1O88870 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Best1O88870 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Best1O88870 Gm24276-201ENSMUST00000102181 110 ntBASIC1.85□□□□□ -2.11
Best1O88870 Mir544-201ENSMUST00000103813 78 ntBASIC1.85□□□□□ -2.11
Best1O88870 Mir466p-201ENSMUST00000103925 89 ntBASIC1.85□□□□□ -2.11
Best1O88870 Gm25565-201ENSMUST00000104605 105 ntBASIC1.85□□□□□ -2.11
Best1O88870 Gm25541-201ENSMUST00000116888 126 ntBASIC1.85□□□□□ -2.11
Best1O88870 Gm22099-201ENSMUST00000157925 123 ntBASIC1.85□□□□□ -2.11
Best1O88870 Gm24656-201ENSMUST00000177548 132 ntBASIC1.85□□□□□ -2.11
Best1O88870 Mir7026-201ENSMUST00000184384 67 ntBASIC1.85□□□□□ -2.11
Best1O88870 Mir7678-201ENSMUST00000185076 71 ntBASIC1.85□□□□□ -2.11
Best1O88870 Gm26922-201ENSMUST00000082687 72 ntBASIC1.85□□□□□ -2.11
Best1O88870 Snord1a-201ENSMUST00000083160 74 ntBASIC1.85□□□□□ -2.11
Best1O88870 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.85□□□□□ -2.11
Best1O88870 Gm25943-201ENSMUST00000103791 90 ntBASIC1.84□□□□□ -2.11
Best1O88870 Mir466b-7-201ENSMUST00000103804 88 ntBASIC1.84□□□□□ -2.11
Best1O88870 Mir466b-5-201ENSMUST00000103900 88 ntBASIC1.84□□□□□ -2.11
Best1O88870 Gm23048-201ENSMUST00000157237 129 ntBASIC1.84□□□□□ -2.11
Best1O88870 Gm23996-201ENSMUST00000158062 131 ntBASIC1.84□□□□□ -2.11
Best1O88870 Gm22403-201ENSMUST00000174919 84 ntBASIC1.84□□□□□ -2.11
Best1O88870 Mir466b-4-201ENSMUST00000178801 90 ntBASIC1.84□□□□□ -2.11
Best1O88870 Gm22259-201ENSMUST00000178926 107 ntBASIC1.84□□□□□ -2.11
Best1O88870 Gm25285-201ENSMUST00000178951 90 ntBASIC1.84□□□□□ -2.11
Best1O88870 Mir466b-6-201ENSMUST00000180061 90 ntBASIC1.84□□□□□ -2.11
Best1O88870 Mir466c-2-201ENSMUST00000180211 90 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 99.1 ms