Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC1.16□□□□□ -2.22
Cldn5O54942 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC1.16□□□□□ -2.22
Cldn5O54942 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.16□□□□□ -2.22
Cldn5O54942 AC154552.1-201ENSMUST00000222969 202 ntBASIC1.16□□□□□ -2.22
Cldn5O54942 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.16□□□□□ -2.22
Cldn5O54942 Gm9795-201ENSMUST00000062156 693 ntBASIC1.16□□□□□ -2.22
Cldn5O54942 Gm26224-201ENSMUST00000082506 80 ntBASIC1.16□□□□□ -2.22
Cldn5O54942 Gm24204-201ENSMUST00000082950 107 ntBASIC1.16□□□□□ -2.22
Cldn5O54942 Gm13339-201ENSMUST00000120651 510 ntBASIC1.15□□□□□ -2.23
Cldn5O54942 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.15□□□□□ -2.23
Cldn5O54942 Gm23329-201ENSMUST00000157415 108 ntBASIC1.15□□□□□ -2.23
Cldn5O54942 Gm22216-201ENSMUST00000157557 114 ntBASIC1.15□□□□□ -2.23
Cldn5O54942 Gm25768-201ENSMUST00000158570 98 ntBASIC1.15□□□□□ -2.23
Cldn5O54942 Gm28921-201ENSMUST00000190219 378 ntBASIC1.15□□□□□ -2.23
Cldn5O54942 Gm21088-201ENSMUST00000190875 316 ntBASIC1.15□□□□□ -2.23
Cldn5O54942 Mir196b-201ENSMUST00000083509 85 ntBASIC1.15□□□□□ -2.23
Cldn5O54942 Mir410-201ENSMUST00000083563 81 ntBASIC1.15□□□□□ -2.23
Cldn5O54942 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
Cldn5O54942 Gm23328-201ENSMUST00000157418 132 ntBASIC1.14□□□□□ -2.23
Cldn5O54942 Gm22233-201ENSMUST00000157464 114 ntBASIC1.14□□□□□ -2.23
Cldn5O54942 Gm24808-201ENSMUST00000157993 118 ntBASIC1.14□□□□□ -2.23
Cldn5O54942 Gm23665-201ENSMUST00000158054 62 ntBASIC1.14□□□□□ -2.23
Cldn5O54942 Gm25868-201ENSMUST00000158253 114 ntBASIC1.14□□□□□ -2.23
Cldn5O54942 Gm24942-201ENSMUST00000158328 114 ntBASIC1.14□□□□□ -2.23
Cldn5O54942 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC1.14□□□□□ -2.23
Cldn5O54942 Mir6381-201ENSMUST00000183426 87 ntBASIC1.14□□□□□ -2.23
Cldn5O54942 Gm27521-201ENSMUST00000184022 64 ntBASIC1.14□□□□□ -2.23
Cldn5O54942 Gm27419-201ENSMUST00000184576 109 ntBASIC1.14□□□□□ -2.23
Cldn5O54942 Gm45116-201ENSMUST00000207392 275 ntBASIC1.14□□□□□ -2.23
Cldn5O54942 Gm44959-201ENSMUST00000209127 231 ntBASIC1.14□□□□□ -2.23
Cldn5O54942 AC158981.3-202ENSMUST00000228906 523 ntBASIC1.14□□□□□ -2.23
Cldn5O54942 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
Cldn5O54942 Gm12432-201ENSMUST00000119540 186 ntBASIC1.13□□□□□ -2.23
Cldn5O54942 Gm22479-201ENSMUST00000122566 81 ntBASIC1.13□□□□□ -2.23
Cldn5O54942 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.13□□□□□ -2.23
Cldn5O54942 Gm22802-201ENSMUST00000175621 89 ntBASIC1.13□□□□□ -2.23
Cldn5O54942 Gm25615-201ENSMUST00000177836 94 ntBASIC1.13□□□□□ -2.23
Cldn5O54942 Gm23571-201ENSMUST00000180073 127 ntBASIC1.13□□□□□ -2.23
Cldn5O54942 Gm25128-201ENSMUST00000083339 76 ntBASIC1.13□□□□□ -2.23
Cldn5O54942 Gm24453-201ENSMUST00000083346 76 ntBASIC1.13□□□□□ -2.23
Cldn5O54942 Gm22743-201ENSMUST00000083445 133 ntBASIC1.13□□□□□ -2.23
Cldn5O54942 Gm24764-201ENSMUST00000083686 199 ntBASIC1.13□□□□□ -2.23
Cldn5O54942 Gm25650-201ENSMUST00000083784 162 ntBASIC1.13□□□□□ -2.23
Cldn5O54942 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.12□□□□□ -2.23
Cldn5O54942 Gm22097-201ENSMUST00000157929 278 ntBASIC1.12□□□□□ -2.23
Cldn5O54942 Gm23113-201ENSMUST00000158477 99 ntBASIC1.12□□□□□ -2.23
Cldn5O54942 Gm27420-201ENSMUST00000183823 79 ntBASIC1.12□□□□□ -2.23
Cldn5O54942 Gm28862-201ENSMUST00000188246 163 ntBASIC1.12□□□□□ -2.23
Cldn5O54942 Gm43199-201ENSMUST00000200019 307 ntBASIC1.12□□□□□ -2.23
Cldn5O54942 CT009696.1-201ENSMUST00000215745 256 ntBASIC1.12□□□□□ -2.23
Cldn5O54942 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.11□□□□□ -2.23
Cldn5O54942 Gm26363-201ENSMUST00000158866 83 ntBASIC1.11□□□□□ -2.23
Cldn5O54942 Mir6240-201ENSMUST00000184281 117 ntBASIC1.11□□□□□ -2.23
Cldn5O54942 Gm34015-201ENSMUST00000194908 451 ntBASIC1.11□□□□□ -2.23
Cldn5O54942 Gm45673-201ENSMUST00000210293 358 ntBASIC1.11□□□□□ -2.23
Cldn5O54942 AC159896.1-201ENSMUST00000215264 215 ntBASIC1.11□□□□□ -2.23
Cldn5O54942 Snora41-201ENSMUST00000082668 132 ntBASIC1.11□□□□□ -2.23
Cldn5O54942 Mir22-201ENSMUST00000083595 95 ntBASIC1.11□□□□□ -2.23
Cldn5O54942 AC164297.1-201ENSMUST00000224484 1561 ntBASIC1.11□□□□□ -2.23
Cldn5O54942 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
Cldn5O54942 Gm11856-201ENSMUST00000118712 276 ntBASIC1.1□□□□□ -2.23
Cldn5O54942 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC1.1□□□□□ -2.23
Cldn5O54942 Gm23996-201ENSMUST00000158062 131 ntBASIC1.1□□□□□ -2.23
Cldn5O54942 Gm26213-201ENSMUST00000158582 110 ntBASIC1.1□□□□□ -2.23
Cldn5O54942 Gm25715-201ENSMUST00000158627 125 ntBASIC1.1□□□□□ -2.23
Cldn5O54942 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC1.1□□□□□ -2.23
Cldn5O54942 Gm44358-201ENSMUST00000196301 98 ntBASIC1.1□□□□□ -2.23
Cldn5O54942 Gm43406-201ENSMUST00000200356 334 ntBASIC1.1□□□□□ -2.23
Cldn5O54942 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
Cldn5O54942 n-R5s67-201ENSMUST00000104336 114 ntBASIC1.09□□□□□ -2.23
Cldn5O54942 Gm24221-201ENSMUST00000158833 313 ntBASIC1.09□□□□□ -2.23
Cldn5O54942 Mir7663-201ENSMUST00000183950 61 ntBASIC1.09□□□□□ -2.23
Cldn5O54942 Gm27545-201ENSMUST00000184755 202 ntBASIC1.09□□□□□ -2.23
Cldn5O54942 Gm43563-201ENSMUST00000196761 198 ntBASIC1.09□□□□□ -2.23
Cldn5O54942 Gm45313-201ENSMUST00000210584 178 ntBASIC1.09□□□□□ -2.23
Cldn5O54942 CT033781.2-201ENSMUST00000221113 153 ntBASIC1.09□□□□□ -2.23
Cldn5O54942 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.09□□□□□ -2.23
Cldn5O54942 Mir181a-2-201ENSMUST00000083489 76 ntBASIC1.09□□□□□ -2.23
Cldn5O54942 Gm23345-201ENSMUST00000083817 150 ntBASIC1.09□□□□□ -2.23
Cldn5O54942 Gm10222-201ENSMUST00000088336 294 ntBASIC1.09□□□□□ -2.23
Cldn5O54942 Gm43877-201ENSMUST00000205029 2238 ntBASIC1.08□□□□□ -2.24
Cldn5O54942 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC1.08□□□□□ -2.24
Cldn5O54942 Gm24375-201ENSMUST00000104397 132 ntBASIC1.08□□□□□ -2.24
Cldn5O54942 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
Cldn5O54942 Mir669d-2-201ENSMUST00000116854 86 ntBASIC1.08□□□□□ -2.24
Cldn5O54942 Gm13711-201ENSMUST00000119708 453 ntBASIC1.08□□□□□ -2.24
Cldn5O54942 Gm24724-201ENSMUST00000158230 107 ntBASIC1.08□□□□□ -2.24
Cldn5O54942 Gm22450-201ENSMUST00000179641 107 ntBASIC1.08□□□□□ -2.24
Cldn5O54942 Gm25473-201ENSMUST00000180191 107 ntBASIC1.08□□□□□ -2.24
Cldn5O54942 Gm18188-201ENSMUST00000219386 478 ntBASIC1.08□□□□□ -2.24
Cldn5O54942 Gm24856-201ENSMUST00000082809 107 ntBASIC1.08□□□□□ -2.24
Cldn5O54942 Snora19-201ENSMUST00000082962 132 ntBASIC1.08□□□□□ -2.24
Cldn5O54942 Gm22704-201ENSMUST00000083027 137 ntBASIC1.08□□□□□ -2.24
Cldn5O54942 Gm23658-201ENSMUST00000083233 132 ntBASIC1.08□□□□□ -2.24
Cldn5O54942 Gm26071-201ENSMUST00000083261 107 ntBASIC1.08□□□□□ -2.24
Cldn5O54942 Gm24521-201ENSMUST00000083958 107 ntBASIC1.08□□□□□ -2.24
Cldn5O54942 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
Cldn5O54942 Gm25318-201ENSMUST00000122554 314 ntBASIC1.07□□□□□ -2.24
Cldn5O54942 Gm23114-201ENSMUST00000158478 117 ntBASIC1.07□□□□□ -2.24
Cldn5O54942 Mir1931-201ENSMUST00000158589 119 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 140.9 ms