Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Gm28669-201ENSMUST00000188400 100 ntBASIC2.39□□□□□ -2.03
Trim55G3X8Y1 Gm44470-201ENSMUST00000203913 142 ntBASIC2.39□□□□□ -2.03
Trim55G3X8Y1 Gm18502-201ENSMUST00000218679 199 ntBASIC2.39□□□□□ -2.03
Trim55G3X8Y1 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
Trim55G3X8Y1 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.39□□□□□ -2.03
Trim55G3X8Y1 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
Trim55G3X8Y1 Gm23128-201ENSMUST00000104257 132 ntBASIC2.38□□□□□ -2.03
Trim55G3X8Y1 Gm22494-201ENSMUST00000104495 128 ntBASIC2.38□□□□□ -2.03
Trim55G3X8Y1 Gm22105-201ENSMUST00000116734 116 ntBASIC2.38□□□□□ -2.03
Trim55G3X8Y1 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC2.38□□□□□ -2.03
Trim55G3X8Y1 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC2.38□□□□□ -2.03
Trim55G3X8Y1 Gm23813-201ENSMUST00000175153 77 ntBASIC2.38□□□□□ -2.03
Trim55G3X8Y1 Gm29603-201ENSMUST00000186792 334 ntBASIC2.38□□□□□ -2.03
Trim55G3X8Y1 Gm23128-202ENSMUST00000196578 133 ntBASIC2.38□□□□□ -2.03
Trim55G3X8Y1 AC129202.1-201ENSMUST00000224895 526 ntBASIC2.38□□□□□ -2.03
Trim55G3X8Y1 Snora3-201ENSMUST00000083082 132 ntBASIC2.38□□□□□ -2.03
Trim55G3X8Y1 Gm24661-201ENSMUST00000083205 104 ntBASIC2.38□□□□□ -2.03
Trim55G3X8Y1 Gm26339-201ENSMUST00000102368 99 ntBASIC2.37□□□□□ -2.03
Trim55G3X8Y1 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC2.37□□□□□ -2.03
Trim55G3X8Y1 Gm25153-201ENSMUST00000157118 156 ntBASIC2.37□□□□□ -2.03
Trim55G3X8Y1 Mir1949-201ENSMUST00000157434 141 ntBASIC2.37□□□□□ -2.03
Trim55G3X8Y1 Gm24291-201ENSMUST00000157633 162 ntBASIC2.37□□□□□ -2.03
Trim55G3X8Y1 Gm25994-201ENSMUST00000175392 101 ntBASIC2.37□□□□□ -2.03
Trim55G3X8Y1 Gm3852-201ENSMUST00000182781 264 ntBASIC2.37□□□□□ -2.03
Trim55G3X8Y1 Gm37557-201ENSMUST00000191640 139 ntBASIC2.37□□□□□ -2.03
Trim55G3X8Y1 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.37□□□□□ -2.03
Trim55G3X8Y1 AC164561.1-201ENSMUST00000220414 115 ntBASIC2.37□□□□□ -2.03
Trim55G3X8Y1 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Trim55G3X8Y1 Gm24122-201ENSMUST00000104107 132 ntBASIC2.36□□□□□ -2.03
Trim55G3X8Y1 Gm24907-201ENSMUST00000116932 128 ntBASIC2.36□□□□□ -2.03
Trim55G3X8Y1 Gm24212-201ENSMUST00000158258 132 ntBASIC2.36□□□□□ -2.03
Trim55G3X8Y1 Gm26337-201ENSMUST00000178000 79 ntBASIC2.36□□□□□ -2.03
Trim55G3X8Y1 Gm44325-201ENSMUST00000196757 77 ntBASIC2.36□□□□□ -2.03
Trim55G3X8Y1 Mir3969-201ENSMUST00000197106 92 ntBASIC2.36□□□□□ -2.03
Trim55G3X8Y1 Gm45452-201ENSMUST00000210905 177 ntBASIC2.36□□□□□ -2.03
Trim55G3X8Y1 AC159885.1-201ENSMUST00000222221 199 ntBASIC2.36□□□□□ -2.03
Trim55G3X8Y1 AC126691.1-201ENSMUST00000226534 202 ntBASIC2.36□□□□□ -2.03
Trim55G3X8Y1 Gm24412-201ENSMUST00000083426 109 ntBASIC2.36□□□□□ -2.03
Trim55G3X8Y1 Snord7-201ENSMUST00000083781 97 ntBASIC2.36□□□□□ -2.03
Trim55G3X8Y1 Gm23947-201ENSMUST00000093636 107 ntBASIC2.36□□□□□ -2.03
Trim55G3X8Y1 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Trim55G3X8Y1 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.35□□□□□ -2.03
Trim55G3X8Y1 Mir466b-3-201ENSMUST00000103806 81 ntBASIC2.35□□□□□ -2.03
Trim55G3X8Y1 Gm14671-201ENSMUST00000121790 262 ntBASIC2.35□□□□□ -2.03
Trim55G3X8Y1 Gm24559-201ENSMUST00000157519 121 ntBASIC2.35□□□□□ -2.03
Trim55G3X8Y1 Gm22554-201ENSMUST00000157798 147 ntBASIC2.35□□□□□ -2.03
Trim55G3X8Y1 Gm23898-201ENSMUST00000158111 103 ntBASIC2.35□□□□□ -2.03
Trim55G3X8Y1 Gm24210-201ENSMUST00000158263 133 ntBASIC2.35□□□□□ -2.03
Trim55G3X8Y1 Gm24676-201ENSMUST00000158758 75 ntBASIC2.35□□□□□ -2.03
Trim55G3X8Y1 Gm27934-201ENSMUST00000158795 63 ntBASIC2.35□□□□□ -2.03
Trim55G3X8Y1 Gm25368-201ENSMUST00000158847 131 ntBASIC2.35□□□□□ -2.03
Trim55G3X8Y1 Gm24816-201ENSMUST00000175311 151 ntBASIC2.35□□□□□ -2.03
Trim55G3X8Y1 Gm27722-201ENSMUST00000183908 76 ntBASIC2.35□□□□□ -2.03
Trim55G3X8Y1 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Trim55G3X8Y1 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
Trim55G3X8Y1 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Trim55G3X8Y1 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Trim55G3X8Y1 Gm24770-201ENSMUST00000158505 92 ntBASIC2.34□□□□□ -2.03
Trim55G3X8Y1 Gm24167-201ENSMUST00000177733 124 ntBASIC2.34□□□□□ -2.03
Trim55G3X8Y1 Gm23922-201ENSMUST00000178792 79 ntBASIC2.34□□□□□ -2.03
Trim55G3X8Y1 Gm24028-201ENSMUST00000178991 124 ntBASIC2.34□□□□□ -2.03
Trim55G3X8Y1 Gm24657-201ENSMUST00000180085 79 ntBASIC2.34□□□□□ -2.03
Trim55G3X8Y1 Gm22996-201ENSMUST00000180236 79 ntBASIC2.34□□□□□ -2.03
Trim55G3X8Y1 Gm43602-201ENSMUST00000196772 300 ntBASIC2.34□□□□□ -2.03
Trim55G3X8Y1 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC2.34□□□□□ -2.03
Trim55G3X8Y1 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.34□□□□□ -2.03
Trim55G3X8Y1 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC2.34□□□□□ -2.03
Trim55G3X8Y1 Gm43473-201ENSMUST00000200442 5997 ntBASIC2.33□□□□□ -2.04
Trim55G3X8Y1 Gm24922-201ENSMUST00000158511 102 ntBASIC2.33□□□□□ -2.04
Trim55G3X8Y1 Gm16584-201ENSMUST00000159267 189 ntBASIC2.33□□□□□ -2.04
Trim55G3X8Y1 Trbv7-201ENSMUST00000193339 402 ntBASIC2.33□□□□□ -2.04
Trim55G3X8Y1 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.33□□□□□ -2.04
Trim55G3X8Y1 Gm10172-201ENSMUST00000085929 558 ntBASIC2.33□□□□□ -2.04
Trim55G3X8Y1 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC2.33□□□□□ -2.04
Trim55G3X8Y1 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
Trim55G3X8Y1 Gm26074-201ENSMUST00000104063 129 ntBASIC2.32□□□□□ -2.04
Trim55G3X8Y1 Gm26247-201ENSMUST00000116702 91 ntBASIC2.32□□□□□ -2.04
Trim55G3X8Y1 Gm25980-201ENSMUST00000157176 218 ntBASIC2.32□□□□□ -2.04
Trim55G3X8Y1 Mir1931-201ENSMUST00000158589 119 ntBASIC2.32□□□□□ -2.04
Trim55G3X8Y1 Gm22500-201ENSMUST00000158982 99 ntBASIC2.32□□□□□ -2.04
Trim55G3X8Y1 Trav5d-3-201ENSMUST00000170041 270 ntBASIC2.32□□□□□ -2.04
Trim55G3X8Y1 Mir3076-201ENSMUST00000175415 60 ntBASIC2.32□□□□□ -2.04
Trim55G3X8Y1 Mir7013-201ENSMUST00000183540 72 ntBASIC2.32□□□□□ -2.04
Trim55G3X8Y1 Gm8219-201ENSMUST00000218309 242 ntBASIC2.32□□□□□ -2.04
Trim55G3X8Y1 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.32□□□□□ -2.04
Trim55G3X8Y1 AC120540.2-201ENSMUST00000221716 387 ntBASIC2.32□□□□□ -2.04
Trim55G3X8Y1 mt-Ta-201ENSMUST00000082398 69 ntBASIC2.32□□□□□ -2.04
Trim55G3X8Y1 Gm10813-201ENSMUST00000099936 90 ntBASIC2.32□□□□□ -2.04
Trim55G3X8Y1 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Trim55G3X8Y1 Gm44177-201ENSMUST00000204338 2667 ntBASIC2.31□□□□□ -2.04
Trim55G3X8Y1 Gm43484-201ENSMUST00000198333 5966 ntBASIC2.31□□□□□ -2.04
Trim55G3X8Y1 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Trim55G3X8Y1 Mir669b-201ENSMUST00000102172 97 ntBASIC2.31□□□□□ -2.04
Trim55G3X8Y1 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Trim55G3X8Y1 Gm25878-201ENSMUST00000104327 93 ntBASIC2.31□□□□□ -2.04
Trim55G3X8Y1 Gm22387-201ENSMUST00000158191 131 ntBASIC2.31□□□□□ -2.04
Trim55G3X8Y1 Snord87-201ENSMUST00000175437 87 ntBASIC2.31□□□□□ -2.04
Trim55G3X8Y1 Gm23567-201ENSMUST00000178005 107 ntBASIC2.31□□□□□ -2.04
Trim55G3X8Y1 Mir7039-201ENSMUST00000183852 85 ntBASIC2.31□□□□□ -2.04
Trim55G3X8Y1 Mir6419-201ENSMUST00000184784 113 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms