Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 AC109212.1-201ENSMUST00000215561 427 ntBASIC0.33□□□□□ -2.36
Chd3B1AR17 Gm24150-201ENSMUST00000082759 104 ntBASIC0.33□□□□□ -2.36
Chd3B1AR17 Gm25579-201ENSMUST00000083407 106 ntBASIC0.33□□□□□ -2.36
Chd3B1AR17 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.33□□□□□ -2.36
Chd3B1AR17 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
Chd3B1AR17 Gm25393-201ENSMUST00000157336 285 ntBASIC0.33□□□□□ -2.36
Chd3B1AR17 Gm23921-201ENSMUST00000175258 107 ntBASIC0.33□□□□□ -2.36
Chd3B1AR17 Gm26430-201ENSMUST00000178054 107 ntBASIC0.33□□□□□ -2.36
Chd3B1AR17 Gm45543-201ENSMUST00000209327 88 ntBASIC0.33□□□□□ -2.36
Chd3B1AR17 AC164612.2-202ENSMUST00000216314 253 ntBASIC0.33□□□□□ -2.36
Chd3B1AR17 Gm15899-201ENSMUST00000128586 238 ntBASIC0.32□□□□□ -2.36
Chd3B1AR17 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC0.32□□□□□ -2.36
Chd3B1AR17 Mir32-201ENSMUST00000083610 70 ntBASIC0.32□□□□□ -2.36
Chd3B1AR17 Gm24116-201ENSMUST00000103975 107 ntBASIC0.31□□□□□ -2.36
Chd3B1AR17 Gm24296-201ENSMUST00000158297 106 ntBASIC0.31□□□□□ -2.36
Chd3B1AR17 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
Chd3B1AR17 Gm18291-201ENSMUST00000190791 301 ntBASIC0.31□□□□□ -2.36
Chd3B1AR17 Gm43487-201ENSMUST00000200331 1031 ntBASIC0.31□□□□□ -2.36
Chd3B1AR17 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC0.31□□□□□ -2.36
Chd3B1AR17 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.31□□□□□ -2.36
Chd3B1AR17 Gm25627-201ENSMUST00000084003 153 ntBASIC0.31□□□□□ -2.36
Chd3B1AR17 Gm26135-201ENSMUST00000101993 72 ntBASIC0.31□□□□□ -2.36
Chd3B1AR17 Gm23169-201ENSMUST00000157157 112 ntBASIC0.31□□□□□ -2.36
Chd3B1AR17 Gm26116-201ENSMUST00000175600 77 ntBASIC0.31□□□□□ -2.36
Chd3B1AR17 Snord50b-201ENSMUST00000178497 72 ntBASIC0.31□□□□□ -2.36
Chd3B1AR17 Gm27957-201ENSMUST00000184054 127 ntBASIC0.31□□□□□ -2.36
Chd3B1AR17 Gm28648-201ENSMUST00000190092 343 ntBASIC0.31□□□□□ -2.36
Chd3B1AR17 Gm28992-201ENSMUST00000190534 139 ntBASIC0.31□□□□□ -2.36
Chd3B1AR17 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
Chd3B1AR17 Gm44473-201ENSMUST00000204039 152 ntBASIC0.31□□□□□ -2.36
Chd3B1AR17 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC0.31□□□□□ -2.36
Chd3B1AR17 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.31□□□□□ -2.36
Chd3B1AR17 Gm16032-201ENSMUST00000118534 168 ntBASIC0.3□□□□□ -2.36
Chd3B1AR17 Gm25909-201ENSMUST00000157619 121 ntBASIC0.3□□□□□ -2.36
Chd3B1AR17 Gm24853-201ENSMUST00000158026 121 ntBASIC0.3□□□□□ -2.36
Chd3B1AR17 AC192333.2-201ENSMUST00000224771 196 ntBASIC0.3□□□□□ -2.36
Chd3B1AR17 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.3□□□□□ -2.36
Chd3B1AR17 Gm14269-201ENSMUST00000120455 306 ntBASIC0.29□□□□□ -2.36
Chd3B1AR17 Gm23898-201ENSMUST00000158111 103 ntBASIC0.29□□□□□ -2.36
Chd3B1AR17 Gm22114-201ENSMUST00000177756 107 ntBASIC0.29□□□□□ -2.36
Chd3B1AR17 Mir7661-201ENSMUST00000197023 61 ntBASIC0.29□□□□□ -2.36
Chd3B1AR17 AC173345.2-201ENSMUST00000222795 153 ntBASIC0.29□□□□□ -2.36
Chd3B1AR17 AC183092.1-201ENSMUST00000224301 153 ntBASIC0.29□□□□□ -2.36
Chd3B1AR17 Gm23690-201ENSMUST00000083036 94 ntBASIC0.29□□□□□ -2.36
Chd3B1AR17 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.29□□□□□ -2.36
Chd3B1AR17 Gm29014-201ENSMUST00000191422 326 ntBASIC0.29□□□□□ -2.36
Chd3B1AR17 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC0.29□□□□□ -2.36
Chd3B1AR17 Gm15379-201ENSMUST00000121224 648 ntBASIC0.28□□□□□ -2.36
Chd3B1AR17 Gm25109-201ENSMUST00000122474 114 ntBASIC0.28□□□□□ -2.36
Chd3B1AR17 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC0.28□□□□□ -2.36
Chd3B1AR17 Gm25314-201ENSMUST00000178810 79 ntBASIC0.28□□□□□ -2.36
Chd3B1AR17 Gm45119-201ENSMUST00000207612 199 ntBASIC0.28□□□□□ -2.36
Chd3B1AR17 CT033781.2-201ENSMUST00000221113 153 ntBASIC0.28□□□□□ -2.36
Chd3B1AR17 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC0.28□□□□□ -2.36
Chd3B1AR17 Gm29640-201ENSMUST00000187972 278 ntBASIC0.28□□□□□ -2.37
Chd3B1AR17 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC0.28□□□□□ -2.37
Chd3B1AR17 Gm44465-201ENSMUST00000199536 114 ntBASIC0.28□□□□□ -2.37
Chd3B1AR17 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC0.28□□□□□ -2.37
Chd3B1AR17 Gm26164-201ENSMUST00000083793 104 ntBASIC0.28□□□□□ -2.37
Chd3B1AR17 Gm14782-201ENSMUST00000120151 195 ntBASIC0.27□□□□□ -2.37
Chd3B1AR17 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
Chd3B1AR17 Gm27540-201ENSMUST00000184950 187 ntBASIC0.27□□□□□ -2.37
Chd3B1AR17 Gm24163-201ENSMUST00000093660 132 ntBASIC0.27□□□□□ -2.37
Chd3B1AR17 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
Chd3B1AR17 Gm22786-201ENSMUST00000104086 122 ntBASIC0.26□□□□□ -2.37
Chd3B1AR17 Gm25783-201ENSMUST00000122525 190 ntBASIC0.26□□□□□ -2.37
Chd3B1AR17 Gm25781-201ENSMUST00000122527 84 ntBASIC0.26□□□□□ -2.37
Chd3B1AR17 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.26□□□□□ -2.37
Chd3B1AR17 Gm20462-201ENSMUST00000172623 408 ntBASIC0.26□□□□□ -2.37
Chd3B1AR17 Gm22914-201ENSMUST00000175195 77 ntBASIC0.26□□□□□ -2.37
Chd3B1AR17 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC0.26□□□□□ -2.37
Chd3B1AR17 Gm7654-201ENSMUST00000186738 683 ntBASIC0.26□□□□□ -2.37
Chd3B1AR17 Mir468-201ENSMUST00000197332 78 ntBASIC0.26□□□□□ -2.37
Chd3B1AR17 Gm45508-201ENSMUST00000209298 299 ntBASIC0.26□□□□□ -2.37
Chd3B1AR17 Mir30a-201ENSMUST00000083471 71 ntBASIC0.26□□□□□ -2.37
Chd3B1AR17 Gm17132-201ENSMUST00000109542 1158 ntBASIC0.26□□□□□ -2.37
Chd3B1AR17 Gm12225-201ENSMUST00000117995 298 ntBASIC0.26□□□□□ -2.37
Chd3B1AR17 Mup-ps22-201ENSMUST00000121611 243 ntBASIC0.26□□□□□ -2.37
Chd3B1AR17 Gm25825-201ENSMUST00000157091 124 ntBASIC0.26□□□□□ -2.37
Chd3B1AR17 Gm22321-201ENSMUST00000157152 104 ntBASIC0.26□□□□□ -2.37
Chd3B1AR17 Gm22942-201ENSMUST00000158563 124 ntBASIC0.26□□□□□ -2.37
Chd3B1AR17 Gm20144-201ENSMUST00000203031 165 ntBASIC0.26□□□□□ -2.37
Chd3B1AR17 AC166358.10-201ENSMUST00000220556 144 ntBASIC0.26□□□□□ -2.37
Chd3B1AR17 Gm22809-201ENSMUST00000082743 156 ntBASIC0.26□□□□□ -2.37
Chd3B1AR17 Gm23969-201ENSMUST00000083324 74 ntBASIC0.26□□□□□ -2.37
Chd3B1AR17 Gm23041-201ENSMUST00000083868 106 ntBASIC0.26□□□□□ -2.37
Chd3B1AR17 Mir672-201ENSMUST00000102331 100 ntBASIC0.25□□□□□ -2.37
Chd3B1AR17 Mir466f-1-201ENSMUST00000104779 94 ntBASIC0.25□□□□□ -2.37
Chd3B1AR17 Gm14296-202ENSMUST00000108931 750 ntBASIC0.25□□□□□ -2.37
Chd3B1AR17 Gm24587-201ENSMUST00000116697 89 ntBASIC0.25□□□□□ -2.37
Chd3B1AR17 Mir1961-201ENSMUST00000158643 112 ntBASIC0.25□□□□□ -2.37
Chd3B1AR17 Gm24678-201ENSMUST00000158756 104 ntBASIC0.25□□□□□ -2.37
Chd3B1AR17 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.25□□□□□ -2.37
Chd3B1AR17 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC0.25□□□□□ -2.37
Chd3B1AR17 Gm27402-201ENSMUST00000183890 120 ntBASIC0.25□□□□□ -2.37
Chd3B1AR17 Gm42988-201ENSMUST00000198116 225 ntBASIC0.25□□□□□ -2.37
Chd3B1AR17 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
Chd3B1AR17 Gm22248-201ENSMUST00000082482 150 ntBASIC0.25□□□□□ -2.37
Chd3B1AR17 Gm26107-201ENSMUST00000083972 107 ntBASIC0.25□□□□□ -2.37
Chd3B1AR17 Mir487b-201ENSMUST00000102265 82 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms