Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm22942-201ENSMUST00000158563 124 ntBASIC0.09□□□□□ -2.39
Col6a4A2AX52 Gm22200-201ENSMUST00000158614 67 ntBASIC0.09□□□□□ -2.39
Col6a4A2AX52 Gm25241-201ENSMUST00000174909 84 ntBASIC0.09□□□□□ -2.39
Col6a4A2AX52 Gm26217-201ENSMUST00000175212 84 ntBASIC0.09□□□□□ -2.39
Col6a4A2AX52 Gm25249-201ENSMUST00000175471 78 ntBASIC0.09□□□□□ -2.39
Col6a4A2AX52 Gm22631-201ENSMUST00000179656 94 ntBASIC0.09□□□□□ -2.39
Col6a4A2AX52 Gm27540-201ENSMUST00000184950 187 ntBASIC0.09□□□□□ -2.39
Col6a4A2AX52 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC0.09□□□□□ -2.39
Col6a4A2AX52 AC154552.1-201ENSMUST00000222969 202 ntBASIC0.09□□□□□ -2.39
Col6a4A2AX52 AC154747.1-201ENSMUST00000225265 239 ntBASIC0.09□□□□□ -2.39
Col6a4A2AX52 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC0.09□□□□□ -2.39
Col6a4A2AX52 Snord95-201ENSMUST00000082846 68 ntBASIC0.09□□□□□ -2.39
Col6a4A2AX52 Gm24356-201ENSMUST00000082859 106 ntBASIC0.09□□□□□ -2.39
Col6a4A2AX52 Gm22656-201ENSMUST00000104199 171 ntBASIC0.09□□□□□ -2.4
Col6a4A2AX52 Mir743b-201ENSMUST00000104751 77 ntBASIC0.09□□□□□ -2.4
Col6a4A2AX52 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC0.09□□□□□ -2.4
Col6a4A2AX52 Gm14392-201ENSMUST00000120332 401 ntBASIC0.09□□□□□ -2.4
Col6a4A2AX52 Gm14922-201ENSMUST00000121131 163 ntBASIC0.09□□□□□ -2.4
Col6a4A2AX52 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC0.09□□□□□ -2.4
Col6a4A2AX52 Gm12770-201ENSMUST00000121734 462 ntBASIC0.09□□□□□ -2.4
Col6a4A2AX52 Gm14413-201ENSMUST00000122158 408 ntBASIC0.09□□□□□ -2.4
Col6a4A2AX52 Gm22332-201ENSMUST00000158072 126 ntBASIC0.09□□□□□ -2.4
Col6a4A2AX52 Gm22087-201ENSMUST00000158339 88 ntBASIC0.09□□□□□ -2.4
Col6a4A2AX52 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC0.09□□□□□ -2.4
Col6a4A2AX52 Gm28661-201ENSMUST00000188231 681 ntBASIC0.09□□□□□ -2.4
Col6a4A2AX52 Gm28414-201ENSMUST00000190111 294 ntBASIC0.09□□□□□ -2.4
Col6a4A2AX52 AC116589.9-201ENSMUST00000221462 908 ntBASIC0.09□□□□□ -2.4
Col6a4A2AX52 Gm23448-201ENSMUST00000083151 104 ntBASIC0.09□□□□□ -2.4
Col6a4A2AX52 Gm26071-201ENSMUST00000083261 107 ntBASIC0.09□□□□□ -2.4
Col6a4A2AX52 Mir377-201ENSMUST00000083504 68 ntBASIC0.09□□□□□ -2.4
Col6a4A2AX52 Gm24523-201ENSMUST00000083965 132 ntBASIC0.09□□□□□ -2.4
Col6a4A2AX52 Gm16032-201ENSMUST00000118534 168 ntBASIC0.08□□□□□ -2.4
Col6a4A2AX52 Gm23982-201ENSMUST00000157141 106 ntBASIC0.08□□□□□ -2.4
Col6a4A2AX52 Gm26149-201ENSMUST00000157432 108 ntBASIC0.08□□□□□ -2.4
Col6a4A2AX52 Gm23759-201ENSMUST00000158351 268 ntBASIC0.08□□□□□ -2.4
Col6a4A2AX52 Gm25600-201ENSMUST00000158357 106 ntBASIC0.08□□□□□ -2.4
Col6a4A2AX52 Gm22327-201ENSMUST00000158899 108 ntBASIC0.08□□□□□ -2.4
Col6a4A2AX52 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.08□□□□□ -2.4
Col6a4A2AX52 Gm24487-201ENSMUST00000178017 63 ntBASIC0.08□□□□□ -2.4
Col6a4A2AX52 Gm26335-201ENSMUST00000178449 107 ntBASIC0.08□□□□□ -2.4
Col6a4A2AX52 Mir7j-201ENSMUST00000184427 122 ntBASIC0.08□□□□□ -2.4
Col6a4A2AX52 Gm28917-201ENSMUST00000187294 237 ntBASIC0.08□□□□□ -2.4
Col6a4A2AX52 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC0.08□□□□□ -2.4
Col6a4A2AX52 Trbv25-201ENSMUST00000194700 273 ntBASIC0.08□□□□□ -2.4
Col6a4A2AX52 Mir7657-201ENSMUST00000196051 57 ntBASIC0.08□□□□□ -2.4
Col6a4A2AX52 Mir691-201ENSMUST00000199719 78 ntBASIC0.08□□□□□ -2.4
Col6a4A2AX52 Gm45617-201ENSMUST00000211132 209 ntBASIC0.08□□□□□ -2.4
Col6a4A2AX52 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC0.08□□□□□ -2.4
Col6a4A2AX52 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC0.08□□□□□ -2.4
Col6a4A2AX52 Gm25586-201ENSMUST00000082499 112 ntBASIC0.08□□□□□ -2.4
Col6a4A2AX52 Gm24150-201ENSMUST00000082759 104 ntBASIC0.08□□□□□ -2.4
Col6a4A2AX52 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC0.08□□□□□ -2.4
Col6a4A2AX52 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC0.08□□□□□ -2.4
Col6a4A2AX52 Gm14293-201ENSMUST00000118528 577 ntBASIC0.08□□□□□ -2.4
Col6a4A2AX52 Gm25783-201ENSMUST00000122525 190 ntBASIC0.08□□□□□ -2.4
Col6a4A2AX52 Gm22914-201ENSMUST00000175195 77 ntBASIC0.08□□□□□ -2.4
Col6a4A2AX52 Gm18588-201ENSMUST00000177308 492 ntBASIC0.08□□□□□ -2.4
Col6a4A2AX52 Gm26073-201ENSMUST00000179906 127 ntBASIC0.08□□□□□ -2.4
Col6a4A2AX52 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
Col6a4A2AX52 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
Col6a4A2AX52 Gm43563-201ENSMUST00000196761 198 ntBASIC0.08□□□□□ -2.4
Col6a4A2AX52 Gm44464-201ENSMUST00000198010 138 ntBASIC0.08□□□□□ -2.4
Col6a4A2AX52 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.08□□□□□ -2.4
Col6a4A2AX52 AC130821.1-201ENSMUST00000221997 293 ntBASIC0.08□□□□□ -2.4
Col6a4A2AX52 Snora20-201ENSMUST00000082703 128 ntBASIC0.08□□□□□ -2.4
Col6a4A2AX52 Mir133a-1-201ENSMUST00000083465 68 ntBASIC0.08□□□□□ -2.4
Col6a4A2AX52 Gm26314-201ENSMUST00000083891 107 ntBASIC0.08□□□□□ -2.4
Col6a4A2AX52 Gm22834-201ENSMUST00000102021 79 ntBASIC0.07□□□□□ -2.4
Col6a4A2AX52 Gm26384-201ENSMUST00000102183 110 ntBASIC0.07□□□□□ -2.4
Col6a4A2AX52 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC0.07□□□□□ -2.4
Col6a4A2AX52 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
Col6a4A2AX52 Gm15289-201ENSMUST00000117793 244 ntBASIC0.07□□□□□ -2.4
Col6a4A2AX52 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC0.07□□□□□ -2.4
Col6a4A2AX52 Gm13720-201ENSMUST00000120741 196 ntBASIC0.07□□□□□ -2.4
Col6a4A2AX52 n-R5s73-201ENSMUST00000122508 107 ntBASIC0.07□□□□□ -2.4
Col6a4A2AX52 Gm24141-201ENSMUST00000122776 115 ntBASIC0.07□□□□□ -2.4
Col6a4A2AX52 Gm23474-201ENSMUST00000158884 75 ntBASIC0.07□□□□□ -2.4
Col6a4A2AX52 Gm23523-201ENSMUST00000180190 107 ntBASIC0.07□□□□□ -2.4
Col6a4A2AX52 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC0.07□□□□□ -2.4
Col6a4A2AX52 Gm36956-201ENSMUST00000193830 214 ntBASIC0.07□□□□□ -2.4
Col6a4A2AX52 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC0.07□□□□□ -2.4
Col6a4A2AX52 Mir703-201ENSMUST00000197105 109 ntBASIC0.07□□□□□ -2.4
Col6a4A2AX52 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC0.07□□□□□ -2.4
Col6a4A2AX52 Gm45673-201ENSMUST00000210293 358 ntBASIC0.07□□□□□ -2.4
Col6a4A2AX52 Gm23442-201ENSMUST00000082919 134 ntBASIC0.07□□□□□ -2.4
Col6a4A2AX52 Mir582-201ENSMUST00000103758 81 ntBASIC0.07□□□□□ -2.4
Col6a4A2AX52 Gm9059-201ENSMUST00000118319 183 ntBASIC0.07□□□□□ -2.4
Col6a4A2AX52 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
Col6a4A2AX52 Gm22818-201ENSMUST00000157446 104 ntBASIC0.07□□□□□ -2.4
Col6a4A2AX52 Gm24009-201ENSMUST00000157734 93 ntBASIC0.07□□□□□ -2.4
Col6a4A2AX52 Gm23898-201ENSMUST00000158111 103 ntBASIC0.07□□□□□ -2.4
Col6a4A2AX52 Gm27659-201ENSMUST00000183472 98 ntBASIC0.07□□□□□ -2.4
Col6a4A2AX52 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC0.07□□□□□ -2.4
Col6a4A2AX52 Gm27365-201ENSMUST00000184041 177 ntBASIC0.07□□□□□ -2.4
Col6a4A2AX52 Gm28648-201ENSMUST00000190092 343 ntBASIC0.07□□□□□ -2.4
Col6a4A2AX52 Gm37715-201ENSMUST00000193206 235 ntBASIC0.07□□□□□ -2.4
Col6a4A2AX52 Gm38268-201ENSMUST00000195813 193 ntBASIC0.07□□□□□ -2.4
Col6a4A2AX52 AC159896.1-201ENSMUST00000215264 215 ntBASIC0.07□□□□□ -2.4
Col6a4A2AX52 AC153141.1-201ENSMUST00000218636 501 ntBASIC0.07□□□□□ -2.4
Col6a4A2AX52 AC104832.1-201ENSMUST00000222938 550 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms