Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Gm23013-201ENSMUST00000104146 106 ntBASIC-0.4□□□□□ -2.47
Trav9-4A0A0B4J1K2 Gm24283-201ENSMUST00000104233 107 ntBASIC-0.4□□□□□ -2.47
Trav9-4A0A0B4J1K2 Gm22591-201ENSMUST00000104243 106 ntBASIC-0.4□□□□□ -2.47
Trav9-4A0A0B4J1K2 Gm22733-201ENSMUST00000158094 91 ntBASIC-0.4□□□□□ -2.47
Trav9-4A0A0B4J1K2 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC-0.4□□□□□ -2.47
Trav9-4A0A0B4J1K2 Snord50b-201ENSMUST00000178497 72 ntBASIC-0.4□□□□□ -2.47
Trav9-4A0A0B4J1K2 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC-0.4□□□□□ -2.47
Trav9-4A0A0B4J1K2 Gm11392-201ENSMUST00000181419 710 ntBASIC-0.4□□□□□ -2.47
Trav9-4A0A0B4J1K2 Gm18185-201ENSMUST00000186725 667 ntBASIC-0.4□□□□□ -2.47
Trav9-4A0A0B4J1K2 Gm28270-201ENSMUST00000188550 109 ntBASIC-0.4□□□□□ -2.47
Trav9-4A0A0B4J1K2 Gm28328-201ENSMUST00000188869 109 ntBASIC-0.4□□□□□ -2.47
Trav9-4A0A0B4J1K2 Gm29047-201ENSMUST00000189816 108 ntBASIC-0.4□□□□□ -2.47
Trav9-4A0A0B4J1K2 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC-0.4□□□□□ -2.47
Trav9-4A0A0B4J1K2 Gm44063-201ENSMUST00000203307 376 ntBASIC-0.4□□□□□ -2.47
Trav9-4A0A0B4J1K2 Gm44923-201ENSMUST00000206673 85 ntBASIC-0.4□□□□□ -2.47
Trav9-4A0A0B4J1K2 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC-0.4□□□□□ -2.47
Trav9-4A0A0B4J1K2 Gm45508-201ENSMUST00000209298 299 ntBASIC-0.4□□□□□ -2.47
Trav9-4A0A0B4J1K2 Gm45471-201ENSMUST00000211270 281 ntBASIC-0.4□□□□□ -2.47
Trav9-4A0A0B4J1K2 Gm24460-201ENSMUST00000082731 106 ntBASIC-0.4□□□□□ -2.47
Trav9-4A0A0B4J1K2 Gm25894-201ENSMUST00000083458 75 ntBASIC-0.4□□□□□ -2.47
Trav9-4A0A0B4J1K2 Gm13711-201ENSMUST00000119708 453 ntBASIC-0.41□□□□□ -2.48
Trav9-4A0A0B4J1K2 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC-0.41□□□□□ -2.48
Trav9-4A0A0B4J1K2 Gm24198-201ENSMUST00000157812 108 ntBASIC-0.41□□□□□ -2.48
Trav9-4A0A0B4J1K2 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC-0.41□□□□□ -2.48
Trav9-4A0A0B4J1K2 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC-0.41□□□□□ -2.48
Trav9-4A0A0B4J1K2 Gm36946-201ENSMUST00000192706 435 ntBASIC-0.41□□□□□ -2.48
Trav9-4A0A0B4J1K2 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC-0.41□□□□□ -2.48
Trav9-4A0A0B4J1K2 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC-0.41□□□□□ -2.48
Trav9-4A0A0B4J1K2 AC120394.1-201ENSMUST00000217153 351 ntBASIC-0.41□□□□□ -2.48
Trav9-4A0A0B4J1K2 Gm18113-201ENSMUST00000220630 303 ntBASIC-0.41□□□□□ -2.48
Trav9-4A0A0B4J1K2 Mir16-2-201ENSMUST00000083672 95 ntBASIC-0.41□□□□□ -2.48
Trav9-4A0A0B4J1K2 Gm22576-201ENSMUST00000083733 104 ntBASIC-0.41□□□□□ -2.48
Trav9-4A0A0B4J1K2 Snord38a-201ENSMUST00000083746 71 ntBASIC-0.41□□□□□ -2.48
Trav9-4A0A0B4J1K2 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC-0.42□□□□□ -2.48
Trav9-4A0A0B4J1K2 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC-0.42□□□□□ -2.48
Trav9-4A0A0B4J1K2 Gm24375-201ENSMUST00000104397 132 ntBASIC-0.42□□□□□ -2.48
Trav9-4A0A0B4J1K2 Gm12255-201ENSMUST00000117184 284 ntBASIC-0.42□□□□□ -2.48
Trav9-4A0A0B4J1K2 Gm14491-201ENSMUST00000121919 199 ntBASIC-0.42□□□□□ -2.48
Trav9-4A0A0B4J1K2 Gm24909-201ENSMUST00000157290 280 ntBASIC-0.42□□□□□ -2.48
Trav9-4A0A0B4J1K2 Gm22586-201ENSMUST00000157507 122 ntBASIC-0.42□□□□□ -2.48
Trav9-4A0A0B4J1K2 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC-0.42□□□□□ -2.48
Trav9-4A0A0B4J1K2 Gm22631-201ENSMUST00000179656 94 ntBASIC-0.42□□□□□ -2.48
Trav9-4A0A0B4J1K2 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC-0.42□□□□□ -2.48
Trav9-4A0A0B4J1K2 Gm38261-201ENSMUST00000192608 316 ntBASIC-0.42□□□□□ -2.48
Trav9-4A0A0B4J1K2 Gm6607-201ENSMUST00000215035 328 ntBASIC-0.42□□□□□ -2.48
Trav9-4A0A0B4J1K2 Gm23509-201ENSMUST00000083080 160 ntBASIC-0.42□□□□□ -2.48
Trav9-4A0A0B4J1K2 CT030170.3-201ENSMUST00000221205 1815 ntBASIC-0.43□□□□□ -2.48
Trav9-4A0A0B4J1K2 Gm15719-201ENSMUST00000120619 635 ntBASIC-0.43□□□□□ -2.48
Trav9-4A0A0B4J1K2 Gm27926-201ENSMUST00000157180 66 ntBASIC-0.43□□□□□ -2.48
Trav9-4A0A0B4J1K2 Gm26022-201ENSMUST00000158663 108 ntBASIC-0.43□□□□□ -2.48
Trav9-4A0A0B4J1K2 Gm17528-201ENSMUST00000171026 239 ntBASIC-0.43□□□□□ -2.48
Trav9-4A0A0B4J1K2 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC-0.43□□□□□ -2.48
Trav9-4A0A0B4J1K2 Gm22887-201ENSMUST00000178586 107 ntBASIC-0.43□□□□□ -2.48
Trav9-4A0A0B4J1K2 Gm7654-201ENSMUST00000186738 683 ntBASIC-0.43□□□□□ -2.48
Trav9-4A0A0B4J1K2 Gm28439-201ENSMUST00000187714 876 ntBASIC-0.43□□□□□ -2.48
Trav9-4A0A0B4J1K2 Gm43810-201ENSMUST00000201018 232 ntBASIC-0.43□□□□□ -2.48
Trav9-4A0A0B4J1K2 Gm44615-201ENSMUST00000206548 358 ntBASIC-0.43□□□□□ -2.48
Trav9-4A0A0B4J1K2 AC116319.1-201ENSMUST00000227765 222 ntBASIC-0.43□□□□□ -2.48
Trav9-4A0A0B4J1K2 Gm24042-201ENSMUST00000083114 103 ntBASIC-0.43□□□□□ -2.48
Trav9-4A0A0B4J1K2 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC-0.43□□□□□ -2.48
Trav9-4A0A0B4J1K2 Mir547-201ENSMUST00000102051 78 ntBASIC-0.44□□□□□ -2.48
Trav9-4A0A0B4J1K2 Mir190b-201ENSMUST00000104803 80 ntBASIC-0.44□□□□□ -2.48
Trav9-4A0A0B4J1K2 Gm24517-201ENSMUST00000122560 107 ntBASIC-0.44□□□□□ -2.48
Trav9-4A0A0B4J1K2 Gm24629-201ENSMUST00000122762 89 ntBASIC-0.44□□□□□ -2.48
Trav9-4A0A0B4J1K2 Gm23314-201ENSMUST00000157218 107 ntBASIC-0.44□□□□□ -2.48
Trav9-4A0A0B4J1K2 Gm20409-201ENSMUST00000173457 130 ntBASIC-0.44□□□□□ -2.48
Trav9-4A0A0B4J1K2 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC-0.44□□□□□ -2.48
Trav9-4A0A0B4J1K2 Gm38268-201ENSMUST00000195813 193 ntBASIC-0.44□□□□□ -2.48
Trav9-4A0A0B4J1K2 Gm43487-201ENSMUST00000200331 1031 ntBASIC-0.44□□□□□ -2.48
Trav9-4A0A0B4J1K2 Gm45197-201ENSMUST00000205288 151 ntBASIC-0.44□□□□□ -2.48
Trav9-4A0A0B4J1K2 Snora75-201ENSMUST00000082903 133 ntBASIC-0.44□□□□□ -2.48
Trav9-4A0A0B4J1K2 Mir350-201ENSMUST00000083639 99 ntBASIC-0.44□□□□□ -2.48
Trav9-4A0A0B4J1K2 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC-0.45□□□□□ -2.48
Trav9-4A0A0B4J1K2 Gm13560-201ENSMUST00000121865 329 ntBASIC-0.45□□□□□ -2.48
Trav9-4A0A0B4J1K2 Gm24595-201ENSMUST00000122501 110 ntBASIC-0.45□□□□□ -2.48
Trav9-4A0A0B4J1K2 Gm25149-201ENSMUST00000157119 82 ntBASIC-0.45□□□□□ -2.48
Trav9-4A0A0B4J1K2 Gm23918-201ENSMUST00000175253 106 ntBASIC-0.45□□□□□ -2.48
Trav9-4A0A0B4J1K2 Mir100-201ENSMUST00000175270 80 ntBASIC-0.45□□□□□ -2.48
Trav9-4A0A0B4J1K2 Mir6390-201ENSMUST00000184405 129 ntBASIC-0.45□□□□□ -2.48
Trav9-4A0A0B4J1K2 Gm27943-201ENSMUST00000184844 116 ntBASIC-0.45□□□□□ -2.48
Trav9-4A0A0B4J1K2 Gm29817-201ENSMUST00000210098 172 ntBASIC-0.45□□□□□ -2.48
Trav9-4A0A0B4J1K2 AL772265.1-201ENSMUST00000214379 305 ntBASIC-0.45□□□□□ -2.48
Trav9-4A0A0B4J1K2 AC141438.3-201ENSMUST00000215632 202 ntBASIC-0.45□□□□□ -2.48
Trav9-4A0A0B4J1K2 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC-0.45□□□□□ -2.48
Trav9-4A0A0B4J1K2 AC117202.2-201ENSMUST00000226491 1101 ntBASIC-0.45□□□□□ -2.48
Trav9-4A0A0B4J1K2 Gm25404-201ENSMUST00000082970 107 ntBASIC-0.45□□□□□ -2.48
Trav9-4A0A0B4J1K2 Mir18-201ENSMUST00000083469 96 ntBASIC-0.45□□□□□ -2.48
Trav9-4A0A0B4J1K2 Gm24796-201ENSMUST00000104007 107 ntBASIC-0.46□□□□□ -2.48
Trav9-4A0A0B4J1K2 Gm25497-201ENSMUST00000104425 132 ntBASIC-0.46□□□□□ -2.48
Trav9-4A0A0B4J1K2 Mir465c-2-201ENSMUST00000104757 81 ntBASIC-0.46□□□□□ -2.48
Trav9-4A0A0B4J1K2 Gm14792-201ENSMUST00000119725 258 ntBASIC-0.46□□□□□ -2.48
Trav9-4A0A0B4J1K2 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC-0.46□□□□□ -2.48
Trav9-4A0A0B4J1K2 Mir1951-201ENSMUST00000157981 89 ntBASIC-0.46□□□□□ -2.48
Trav9-4A0A0B4J1K2 Gm26210-201ENSMUST00000158680 91 ntBASIC-0.46□□□□□ -2.48
Trav9-4A0A0B4J1K2 Mir6377-201ENSMUST00000183760 114 ntBASIC-0.46□□□□□ -2.48
Trav9-4A0A0B4J1K2 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC-0.46□□□□□ -2.48
Trav9-4A0A0B4J1K2 Gm35558-203ENSMUST00000222264 204 ntBASIC-0.46□□□□□ -2.48
Trav9-4A0A0B4J1K2 Gm26071-201ENSMUST00000083261 107 ntBASIC-0.46□□□□□ -2.48
Trav9-4A0A0B4J1K2 Gm22753-201ENSMUST00000083657 107 ntBASIC-0.46□□□□□ -2.48
Trav9-4A0A0B4J1K2 Gm25006-201ENSMUST00000083813 107 ntBASIC-0.46□□□□□ -2.48
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms