Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gm16584-201ENSMUST00000159267 189 ntBASIC1.44□□□□□ -2.18
H2afb1S4R1E0 Gm25749-201ENSMUST00000175485 111 ntBASIC1.44□□□□□ -2.18
H2afb1S4R1E0 Gm27421-201ENSMUST00000184729 167 ntBASIC1.44□□□□□ -2.18
H2afb1S4R1E0 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
H2afb1S4R1E0 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
H2afb1S4R1E0 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
H2afb1S4R1E0 Gm23109-201ENSMUST00000116867 126 ntBASIC1.43□□□□□ -2.18
H2afb1S4R1E0 Gm6897-201ENSMUST00000117714 138 ntBASIC1.43□□□□□ -2.18
H2afb1S4R1E0 Gm14838-201ENSMUST00000118913 248 ntBASIC1.43□□□□□ -2.18
H2afb1S4R1E0 Gm14758-201ENSMUST00000119104 138 ntBASIC1.43□□□□□ -2.18
H2afb1S4R1E0 Gm6444-201ENSMUST00000119611 458 ntBASIC1.43□□□□□ -2.18
H2afb1S4R1E0 Gm23584-201ENSMUST00000157655 129 ntBASIC1.43□□□□□ -2.18
H2afb1S4R1E0 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC1.43□□□□□ -2.18
H2afb1S4R1E0 Gm27694-201ENSMUST00000184740 86 ntBASIC1.43□□□□□ -2.18
H2afb1S4R1E0 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC1.43□□□□□ -2.18
H2afb1S4R1E0 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC1.43□□□□□ -2.18
H2afb1S4R1E0 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
H2afb1S4R1E0 Gm24121-201ENSMUST00000102029 106 ntBASIC1.42□□□□□ -2.18
H2afb1S4R1E0 Gm14536-201ENSMUST00000118324 138 ntBASIC1.42□□□□□ -2.18
H2afb1S4R1E0 Gm15027-201ENSMUST00000120922 138 ntBASIC1.42□□□□□ -2.18
H2afb1S4R1E0 Gm13797-201ENSMUST00000121792 120 ntBASIC1.42□□□□□ -2.18
H2afb1S4R1E0 Mir1967-201ENSMUST00000157789 82 ntBASIC1.42□□□□□ -2.18
H2afb1S4R1E0 Gm25015-201ENSMUST00000158400 128 ntBASIC1.42□□□□□ -2.18
H2afb1S4R1E0 Gm22862-201ENSMUST00000178593 121 ntBASIC1.42□□□□□ -2.18
H2afb1S4R1E0 Gm22621-201ENSMUST00000179678 74 ntBASIC1.42□□□□□ -2.18
H2afb1S4R1E0 Mir7679-201ENSMUST00000183379 63 ntBASIC1.42□□□□□ -2.18
H2afb1S4R1E0 Mir6352-201ENSMUST00000184495 116 ntBASIC1.42□□□□□ -2.18
H2afb1S4R1E0 Gm44962-201ENSMUST00000206460 279 ntBASIC1.42□□□□□ -2.18
H2afb1S4R1E0 Gm19855-201ENSMUST00000210145 249 ntBASIC1.42□□□□□ -2.18
H2afb1S4R1E0 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
H2afb1S4R1E0 AC098718.1-201ENSMUST00000226166 175 ntBASIC1.42□□□□□ -2.18
H2afb1S4R1E0 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.42□□□□□ -2.18
H2afb1S4R1E0 Gm25482-201ENSMUST00000083225 107 ntBASIC1.42□□□□□ -2.18
H2afb1S4R1E0 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.42□□□□□ -2.18
H2afb1S4R1E0 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.41□□□□□ -2.18
H2afb1S4R1E0 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC1.41□□□□□ -2.18
H2afb1S4R1E0 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
H2afb1S4R1E0 Mir669d-201ENSMUST00000104644 121 ntBASIC1.41□□□□□ -2.18
H2afb1S4R1E0 Gm6025-201ENSMUST00000121517 201 ntBASIC1.41□□□□□ -2.18
H2afb1S4R1E0 Gm11204-201ENSMUST00000122438 147 ntBASIC1.41□□□□□ -2.18
H2afb1S4R1E0 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC1.41□□□□□ -2.18
H2afb1S4R1E0 Gm25825-201ENSMUST00000157091 124 ntBASIC1.41□□□□□ -2.18
H2afb1S4R1E0 Gm26279-201ENSMUST00000157095 102 ntBASIC1.41□□□□□ -2.18
H2afb1S4R1E0 Gm22227-201ENSMUST00000157356 259 ntBASIC1.41□□□□□ -2.18
H2afb1S4R1E0 Gm22553-201ENSMUST00000157797 295 ntBASIC1.41□□□□□ -2.18
H2afb1S4R1E0 Gm44483-201ENSMUST00000197203 97 ntBASIC1.41□□□□□ -2.18
H2afb1S4R1E0 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.41□□□□□ -2.18
H2afb1S4R1E0 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.41□□□□□ -2.18
H2afb1S4R1E0 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC1.41□□□□□ -2.18
H2afb1S4R1E0 AC124182.1-201ENSMUST00000227091 321 ntBASIC1.41□□□□□ -2.18
H2afb1S4R1E0 Gm24038-201ENSMUST00000082872 159 ntBASIC1.41□□□□□ -2.18
H2afb1S4R1E0 Gm23100-201ENSMUST00000083455 141 ntBASIC1.41□□□□□ -2.18
H2afb1S4R1E0 AC161250.2-201ENSMUST00000215114 3107 ntBASIC1.41□□□□□ -2.18
H2afb1S4R1E0 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.41□□□□□ -2.18
H2afb1S4R1E0 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
H2afb1S4R1E0 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.4□□□□□ -2.19
H2afb1S4R1E0 Gm13801-201ENSMUST00000120750 160 ntBASIC1.4□□□□□ -2.19
H2afb1S4R1E0 Gm26181-201ENSMUST00000157687 106 ntBASIC1.4□□□□□ -2.19
H2afb1S4R1E0 Gm26024-201ENSMUST00000158657 322 ntBASIC1.4□□□□□ -2.19
H2afb1S4R1E0 Gm23194-201ENSMUST00000158813 105 ntBASIC1.4□□□□□ -2.19
H2afb1S4R1E0 Gm25707-201ENSMUST00000175120 96 ntBASIC1.4□□□□□ -2.19
H2afb1S4R1E0 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.4□□□□□ -2.19
H2afb1S4R1E0 Gm25634-201ENSMUST00000082667 105 ntBASIC1.4□□□□□ -2.19
H2afb1S4R1E0 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.4□□□□□ -2.19
H2afb1S4R1E0 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
H2afb1S4R1E0 Mir653-201ENSMUST00000102402 85 ntBASIC1.39□□□□□ -2.19
H2afb1S4R1E0 Gm24375-201ENSMUST00000104397 132 ntBASIC1.39□□□□□ -2.19
H2afb1S4R1E0 n-R5s188-201ENSMUST00000122646 105 ntBASIC1.39□□□□□ -2.19
H2afb1S4R1E0 Gm24895-201ENSMUST00000122742 74 ntBASIC1.39□□□□□ -2.19
H2afb1S4R1E0 Gm24634-201ENSMUST00000158672 107 ntBASIC1.39□□□□□ -2.19
H2afb1S4R1E0 Gm24174-201ENSMUST00000158933 111 ntBASIC1.39□□□□□ -2.19
H2afb1S4R1E0 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.39□□□□□ -2.19
H2afb1S4R1E0 Gm24366-201ENSMUST00000175383 86 ntBASIC1.39□□□□□ -2.19
H2afb1S4R1E0 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
H2afb1S4R1E0 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.39□□□□□ -2.19
H2afb1S4R1E0 Gm28344-201ENSMUST00000185704 279 ntBASIC1.39□□□□□ -2.19
H2afb1S4R1E0 Gm38183-201ENSMUST00000193189 205 ntBASIC1.39□□□□□ -2.19
H2afb1S4R1E0 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
H2afb1S4R1E0 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.39□□□□□ -2.19
H2afb1S4R1E0 Gm26922-201ENSMUST00000082687 72 ntBASIC1.39□□□□□ -2.19
H2afb1S4R1E0 Mir384-201ENSMUST00000083565 88 ntBASIC1.39□□□□□ -2.19
H2afb1S4R1E0 Gm26293-201ENSMUST00000104170 84 ntBASIC1.38□□□□□ -2.19
H2afb1S4R1E0 Gm23230-201ENSMUST00000157298 133 ntBASIC1.38□□□□□ -2.19
H2afb1S4R1E0 Gm22559-201ENSMUST00000157329 134 ntBASIC1.38□□□□□ -2.19
H2afb1S4R1E0 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.38□□□□□ -2.19
H2afb1S4R1E0 Gm23901-201ENSMUST00000157570 107 ntBASIC1.38□□□□□ -2.19
H2afb1S4R1E0 Gm22963-201ENSMUST00000157960 91 ntBASIC1.38□□□□□ -2.19
H2afb1S4R1E0 Mir669n-201ENSMUST00000158636 54 ntBASIC1.38□□□□□ -2.19
H2afb1S4R1E0 Gm23208-201ENSMUST00000158666 127 ntBASIC1.38□□□□□ -2.19
H2afb1S4R1E0 Gm24415-201ENSMUST00000180218 107 ntBASIC1.38□□□□□ -2.19
H2afb1S4R1E0 Gm27476-201ENSMUST00000183366 104 ntBASIC1.38□□□□□ -2.19
H2afb1S4R1E0 Mir7683-201ENSMUST00000183842 61 ntBASIC1.38□□□□□ -2.19
H2afb1S4R1E0 Mir6917-201ENSMUST00000184111 61 ntBASIC1.38□□□□□ -2.19
H2afb1S4R1E0 Mir7226-201ENSMUST00000184953 60 ntBASIC1.38□□□□□ -2.19
H2afb1S4R1E0 Gm21064-202ENSMUST00000190583 278 ntBASIC1.38□□□□□ -2.19
H2afb1S4R1E0 Gm44325-201ENSMUST00000196757 77 ntBASIC1.38□□□□□ -2.19
H2afb1S4R1E0 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
H2afb1S4R1E0 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.37□□□□□ -2.19
H2afb1S4R1E0 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
H2afb1S4R1E0 Snord19-201ENSMUST00000104609 76 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 199.6 ms