Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Gm23641-201ENSMUST00000157857 101 ntBASIC-1.19□□□□□ -2.6
Scn11aQ9R053 Gm24728-201ENSMUST00000158226 125 ntBASIC-1.19□□□□□ -2.6
Scn11aQ9R053 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC-1.19□□□□□ -2.6
Scn11aQ9R053 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC-1.19□□□□□ -2.6
Scn11aQ9R053 Gm24508-201ENSMUST00000180104 107 ntBASIC-1.19□□□□□ -2.6
Scn11aQ9R053 Gm43556-201ENSMUST00000196186 681 ntBASIC-1.19□□□□□ -2.6
Scn11aQ9R053 Gm42845-201ENSMUST00000197766 105 ntBASIC-1.19□□□□□ -2.6
Scn11aQ9R053 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC-1.19□□□□□ -2.6
Scn11aQ9R053 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC-1.19□□□□□ -2.6
Scn11aQ9R053 Gm23523-201ENSMUST00000180190 107 ntBASIC-1.19□□□□□ -2.6
Scn11aQ9R053 Gm43026-201ENSMUST00000202972 325 ntBASIC-1.19□□□□□ -2.6
Scn11aQ9R053 Gm22005-201ENSMUST00000082795 141 ntBASIC-1.19□□□□□ -2.6
Scn11aQ9R053 Gm24713-201ENSMUST00000178850 107 ntBASIC-1.2□□□□□ -2.6
Scn11aQ9R053 Gm25448-201ENSMUST00000180065 107 ntBASIC-1.2□□□□□ -2.6
Scn11aQ9R053 AC154552.4-201ENSMUST00000222171 151 ntBASIC-1.2□□□□□ -2.6
Scn11aQ9R053 Gm22509-201ENSMUST00000082775 107 ntBASIC-1.2□□□□□ -2.6
Scn11aQ9R053 Gm26108-201ENSMUST00000083973 191 ntBASIC-1.2□□□□□ -2.6
Scn11aQ9R053 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC-1.21□□□□□ -2.6
Scn11aQ9R053 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC-1.21□□□□□ -2.6
Scn11aQ9R053 Gm23239-201ENSMUST00000083006 181 ntBASIC-1.21□□□□□ -2.6
Scn11aQ9R053 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC-1.21□□□□□ -2.6
Scn11aQ9R053 Gm24308-201ENSMUST00000177773 114 ntBASIC-1.21□□□□□ -2.6
Scn11aQ9R053 Gm24137-201ENSMUST00000180055 79 ntBASIC-1.21□□□□□ -2.6
Scn11aQ9R053 Gm22391-201ENSMUST00000180356 79 ntBASIC-1.21□□□□□ -2.6
Scn11aQ9R053 Gm24966-201ENSMUST00000082443 79 ntBASIC-1.21□□□□□ -2.6
Scn11aQ9R053 Gm24614-201ENSMUST00000083269 107 ntBASIC-1.21□□□□□ -2.6
Scn11aQ9R053 Gm12016-201ENSMUST00000119079 681 ntBASIC-1.22□□□□□ -2.6
Scn11aQ9R053 Gm24417-201ENSMUST00000178123 79 ntBASIC-1.22□□□□□ -2.6
Scn11aQ9R053 Gm24653-201ENSMUST00000178541 79 ntBASIC-1.22□□□□□ -2.6
Scn11aQ9R053 Gm25934-201ENSMUST00000178642 79 ntBASIC-1.22□□□□□ -2.6
Scn11aQ9R053 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC-1.23□□□□□ -2.61
Scn11aQ9R053 Gm23068-201ENSMUST00000158239 293 ntBASIC-1.23□□□□□ -2.61
Scn11aQ9R053 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC-1.23□□□□□ -2.61
Scn11aQ9R053 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC-1.23□□□□□ -2.61
Scn11aQ9R053 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC-1.23□□□□□ -2.61
Scn11aQ9R053 AC164304.1-201ENSMUST00000226920 272 ntBASIC-1.23□□□□□ -2.61
Scn11aQ9R053 Gm25855-201ENSMUST00000082787 72 ntBASIC-1.23□□□□□ -2.61
Scn11aQ9R053 Mir669i-201ENSMUST00000117007 127 ntBASIC-1.24□□□□□ -2.61
Scn11aQ9R053 Gm23184-201ENSMUST00000122594 131 ntBASIC-1.24□□□□□ -2.61
Scn11aQ9R053 Gm23253-201ENSMUST00000157441 104 ntBASIC-1.24□□□□□ -2.61
Scn11aQ9R053 AC100209.2-201ENSMUST00000224461 451 ntBASIC-1.24□□□□□ -2.61
Scn11aQ9R053 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC-1.24□□□□□ -2.61
Scn11aQ9R053 Gm23628-201ENSMUST00000082464 173 ntBASIC-1.24□□□□□ -2.61
Scn11aQ9R053 Gm22031-201ENSMUST00000116945 126 ntBASIC-1.24□□□□□ -2.61
Scn11aQ9R053 Gm14359-201ENSMUST00000118883 424 ntBASIC-1.24□□□□□ -2.61
Scn11aQ9R053 Gm15279-201ENSMUST00000155593 288 ntBASIC-1.24□□□□□ -2.61
Scn11aQ9R053 Gm23538-201ENSMUST00000157535 101 ntBASIC-1.24□□□□□ -2.61
Scn11aQ9R053 Gm25472-201ENSMUST00000175454 78 ntBASIC-1.24□□□□□ -2.61
Scn11aQ9R053 Gm26430-201ENSMUST00000178054 107 ntBASIC-1.24□□□□□ -2.61
Scn11aQ9R053 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC-1.24□□□□□ -2.61
Scn11aQ9R053 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC-1.24□□□□□ -2.61
Scn11aQ9R053 Gm10172-201ENSMUST00000085929 558 ntBASIC-1.24□□□□□ -2.61
Scn11aQ9R053 Gm27047-201ENSMUST00000183072 1819 ntBASIC-1.24□□□□□ -2.61
Scn11aQ9R053 Defb44-ps-201ENSMUST00000126871 219 ntBASIC-1.25□□□□□ -2.61
Scn11aQ9R053 Gm24439-201ENSMUST00000157894 117 ntBASIC-1.25□□□□□ -2.61
Scn11aQ9R053 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC-1.25□□□□□ -2.61
Scn11aQ9R053 Gm22813-202ENSMUST00000200346 124 ntBASIC-1.25□□□□□ -2.61
Scn11aQ9R053 Gm24459-201ENSMUST00000082730 86 ntBASIC-1.25□□□□□ -2.61
Scn11aQ9R053 Gm27993-201ENSMUST00000184362 85 ntBASIC-1.26□□□□□ -2.61
Scn11aQ9R053 n-R5s153-201ENSMUST00000083451 116 ntBASIC-1.26□□□□□ -2.61
Scn11aQ9R053 Mir452-201ENSMUST00000093629 85 ntBASIC-1.26□□□□□ -2.61
Scn11aQ9R053 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC-1.26□□□□□ -2.61
Scn11aQ9R053 Gm22450-201ENSMUST00000179641 107 ntBASIC-1.26□□□□□ -2.61
Scn11aQ9R053 Gm23614-201ENSMUST00000082598 107 ntBASIC-1.26□□□□□ -2.61
Scn11aQ9R053 Gm25494-201ENSMUST00000158143 100 ntBASIC-1.27□□□□□ -2.61
Scn11aQ9R053 Mir1931-201ENSMUST00000158589 119 ntBASIC-1.27□□□□□ -2.61
Scn11aQ9R053 Gm25156-201ENSMUST00000179809 79 ntBASIC-1.27□□□□□ -2.61
Scn11aQ9R053 Gm27793-201ENSMUST00000183405 76 ntBASIC-1.27□□□□□ -2.61
Scn11aQ9R053 Gm18185-201ENSMUST00000186725 667 ntBASIC-1.27□□□□□ -2.61
Scn11aQ9R053 Gm44311-201ENSMUST00000196448 69 ntBASIC-1.27□□□□□ -2.61
Scn11aQ9R053 Gm44300-201ENSMUST00000196792 121 ntBASIC-1.27□□□□□ -2.61
Scn11aQ9R053 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC-1.27□□□□□ -2.61
Scn11aQ9R053 Gm24045-201ENSMUST00000083113 98 ntBASIC-1.27□□□□□ -2.61
Scn11aQ9R053 Mir155-201ENSMUST00000083463 65 ntBASIC-1.27□□□□□ -2.61
Scn11aQ9R053 Gm24764-201ENSMUST00000083686 199 ntBASIC-1.27□□□□□ -2.61
Scn11aQ9R053 Gm25651-201ENSMUST00000083782 119 ntBASIC-1.27□□□□□ -2.61
Scn11aQ9R053 Gm22693-201ENSMUST00000175049 442 ntBASIC-1.28□□□□□ -2.61
Scn11aQ9R053 Gm26365-201ENSMUST00000179177 94 ntBASIC-1.28□□□□□ -2.61
Scn11aQ9R053 Mir6377-201ENSMUST00000183760 114 ntBASIC-1.28□□□□□ -2.61
Scn11aQ9R053 Gm24233-201ENSMUST00000104317 122 ntBASIC-1.29□□□□□ -2.62
Scn11aQ9R053 Gm22100-201ENSMUST00000157926 63 ntBASIC-1.29□□□□□ -2.62
Scn11aQ9R053 Gm24191-201ENSMUST00000157977 122 ntBASIC-1.29□□□□□ -2.62
Scn11aQ9R053 Gm25334-201ENSMUST00000158036 110 ntBASIC-1.29□□□□□ -2.62
Scn11aQ9R053 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC-1.29□□□□□ -2.62
Scn11aQ9R053 Gm23002-201ENSMUST00000179221 107 ntBASIC-1.29□□□□□ -2.62
Scn11aQ9R053 Gm18667-201ENSMUST00000186523 484 ntBASIC-1.29□□□□□ -2.62
Scn11aQ9R053 Mir7661-201ENSMUST00000197023 61 ntBASIC-1.29□□□□□ -2.62
Scn11aQ9R053 Gm44468-201ENSMUST00000199516 105 ntBASIC-1.29□□□□□ -2.62
Scn11aQ9R053 AC117656.1-201ENSMUST00000225826 339 ntBASIC-1.29□□□□□ -2.62
Scn11aQ9R053 Gm26446-201ENSMUST00000082455 103 ntBASIC-1.29□□□□□ -2.62
Scn11aQ9R053 Gm26123-201ENSMUST00000083363 135 ntBASIC-1.29□□□□□ -2.62
Scn11aQ9R053 Mir547-201ENSMUST00000102051 78 ntBASIC-1.29□□□□□ -2.62
Scn11aQ9R053 Gm10177-202ENSMUST00000161698 207 ntBASIC-1.29□□□□□ -2.62
Scn11aQ9R053 Gm7925-201ENSMUST00000166690 401 ntBASIC-1.29□□□□□ -2.62
Scn11aQ9R053 Gm28016-201ENSMUST00000184594 196 ntBASIC-1.29□□□□□ -2.62
Scn11aQ9R053 Trav5d-2-201ENSMUST00000196107 275 ntBASIC-1.29□□□□□ -2.62
Scn11aQ9R053 Gm44337-201ENSMUST00000196553 114 ntBASIC-1.29□□□□□ -2.62
Scn11aQ9R053 Trav5n-2-201ENSMUST00000197136 275 ntBASIC-1.29□□□□□ -2.62
Scn11aQ9R053 Mir1949-202ENSMUST00000199259 70 ntBASIC-1.29□□□□□ -2.62
Scn11aQ9R053 Gm44327-201ENSMUST00000200068 117 ntBASIC-1.29□□□□□ -2.62
Retrieved 100 of 76,532 protein–RNA pairs in 174.1 ms