Protein–RNA interactions for Protein: Q9QZS0

Col4a3, Collagen alpha-3(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3Q9QZS0 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
Col4a3Q9QZS0 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC0.31□□□□□ -2.36
Col4a3Q9QZS0 Gm28992-201ENSMUST00000190534 139 ntBASIC0.31□□□□□ -2.36
Col4a3Q9QZS0 Gm44976-201ENSMUST00000205543 261 ntBASIC0.31□□□□□ -2.36
Col4a3Q9QZS0 Gm45403-201ENSMUST00000209453 276 ntBASIC0.31□□□□□ -2.36
Col4a3Q9QZS0 Gm24311-201ENSMUST00000082570 104 ntBASIC0.31□□□□□ -2.36
Col4a3Q9QZS0 Gm23130-201ENSMUST00000104252 74 ntBASIC0.3□□□□□ -2.36
Col4a3Q9QZS0 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
Col4a3Q9QZS0 Gm23169-201ENSMUST00000157157 112 ntBASIC0.3□□□□□ -2.36
Col4a3Q9QZS0 Gm24308-201ENSMUST00000177773 114 ntBASIC0.3□□□□□ -2.36
Col4a3Q9QZS0 Gm27957-201ENSMUST00000184054 127 ntBASIC0.3□□□□□ -2.36
Col4a3Q9QZS0 Gm27943-201ENSMUST00000184844 116 ntBASIC0.3□□□□□ -2.36
Col4a3Q9QZS0 Gm28648-201ENSMUST00000190092 343 ntBASIC0.3□□□□□ -2.36
Col4a3Q9QZS0 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
Col4a3Q9QZS0 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC0.3□□□□□ -2.36
Col4a3Q9QZS0 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC0.3□□□□□ -2.36
Col4a3Q9QZS0 Gm44960-201ENSMUST00000207403 141 ntBASIC0.3□□□□□ -2.36
Col4a3Q9QZS0 CT954323.1-201ENSMUST00000222774 229 ntBASIC0.3□□□□□ -2.36
Col4a3Q9QZS0 AC173482.5-201ENSMUST00000224181 327 ntBASIC0.3□□□□□ -2.36
Col4a3Q9QZS0 Gm24966-201ENSMUST00000082443 79 ntBASIC0.3□□□□□ -2.36
Col4a3Q9QZS0 Gm25851-201ENSMUST00000082794 107 ntBASIC0.3□□□□□ -2.36
Col4a3Q9QZS0 Mir324-201ENSMUST00000083600 89 ntBASIC0.3□□□□□ -2.36
Col4a3Q9QZS0 Gm25207-201ENSMUST00000093745 107 ntBASIC0.3□□□□□ -2.36
Col4a3Q9QZS0 Gm26011-201ENSMUST00000104410 104 ntBASIC0.3□□□□□ -2.36
Col4a3Q9QZS0 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
Col4a3Q9QZS0 Gm22796-201ENSMUST00000157234 106 ntBASIC0.3□□□□□ -2.36
Col4a3Q9QZS0 Gm22113-201ENSMUST00000158343 104 ntBASIC0.3□□□□□ -2.36
Col4a3Q9QZS0 Gm25643-201ENSMUST00000158874 103 ntBASIC0.3□□□□□ -2.36
Col4a3Q9QZS0 Gm26430-201ENSMUST00000178054 107 ntBASIC0.3□□□□□ -2.36
Col4a3Q9QZS0 Gm17067-202ENSMUST00000180131 123 ntBASIC0.3□□□□□ -2.36
Col4a3Q9QZS0 Gm27755-201ENSMUST00000184623 132 ntBASIC0.3□□□□□ -2.36
Col4a3Q9QZS0 Gm45119-201ENSMUST00000207612 199 ntBASIC0.3□□□□□ -2.36
Col4a3Q9QZS0 AC116589.3-202ENSMUST00000221770 649 ntBASIC0.3□□□□□ -2.36
Col4a3Q9QZS0 AC116589.6-201ENSMUST00000222252 649 ntBASIC0.3□□□□□ -2.36
Col4a3Q9QZS0 AC154636.2-201ENSMUST00000222538 161 ntBASIC0.3□□□□□ -2.36
Col4a3Q9QZS0 Gm25138-201ENSMUST00000083248 136 ntBASIC0.3□□□□□ -2.36
Col4a3Q9QZS0 Gm22545-201ENSMUST00000104350 132 ntBASIC0.29□□□□□ -2.36
Col4a3Q9QZS0 Gm25884-201ENSMUST00000157782 62 ntBASIC0.29□□□□□ -2.36
Col4a3Q9QZS0 Gm22522-201ENSMUST00000158271 151 ntBASIC0.29□□□□□ -2.36
Col4a3Q9QZS0 Gm20923-201ENSMUST00000190009 319 ntBASIC0.29□□□□□ -2.36
Col4a3Q9QZS0 Gm21088-201ENSMUST00000190875 316 ntBASIC0.29□□□□□ -2.36
Col4a3Q9QZS0 Gm19777-201ENSMUST00000191940 358 ntBASIC0.29□□□□□ -2.36
Col4a3Q9QZS0 Gm44326-201ENSMUST00000198226 101 ntBASIC0.29□□□□□ -2.36
Col4a3Q9QZS0 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.29□□□□□ -2.36
Col4a3Q9QZS0 Gm45704-201ENSMUST00000212582 403 ntBASIC0.29□□□□□ -2.36
Col4a3Q9QZS0 AC157476.1-201ENSMUST00000215555 169 ntBASIC0.29□□□□□ -2.36
Col4a3Q9QZS0 AC117202.2-201ENSMUST00000226491 1101 ntBASIC0.29□□□□□ -2.36
Col4a3Q9QZS0 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
Col4a3Q9QZS0 Gm26500-201ENSMUST00000101867 106 ntBASIC0.28□□□□□ -2.36
Col4a3Q9QZS0 Mir465b-1-201ENSMUST00000103940 79 ntBASIC0.28□□□□□ -2.36
Col4a3Q9QZS0 Mir465b-2-201ENSMUST00000104662 79 ntBASIC0.28□□□□□ -2.36
Col4a3Q9QZS0 Gm26484-201ENSMUST00000158018 106 ntBASIC0.28□□□□□ -2.36
Col4a3Q9QZS0 Gm44345-201ENSMUST00000199560 135 ntBASIC0.28□□□□□ -2.36
Col4a3Q9QZS0 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.28□□□□□ -2.36
Col4a3Q9QZS0 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC0.28□□□□□ -2.36
Col4a3Q9QZS0 AC164612.2-202ENSMUST00000216314 253 ntBASIC0.28□□□□□ -2.36
Col4a3Q9QZS0 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC0.28□□□□□ -2.36
Col4a3Q9QZS0 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.28□□□□□ -2.36
Col4a3Q9QZS0 AC154484.1-201ENSMUST00000227311 771 ntBASIC0.28□□□□□ -2.36
Col4a3Q9QZS0 Gm22454-201ENSMUST00000082583 107 ntBASIC0.28□□□□□ -2.36
Col4a3Q9QZS0 Gm25801-201ENSMUST00000082638 106 ntBASIC0.28□□□□□ -2.36
Col4a3Q9QZS0 Gm24355-201ENSMUST00000082858 122 ntBASIC0.28□□□□□ -2.36
Col4a3Q9QZS0 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC0.28□□□□□ -2.36
Col4a3Q9QZS0 Gm11386-201ENSMUST00000117761 347 ntBASIC0.27□□□□□ -2.37
Col4a3Q9QZS0 Gm11794-201ENSMUST00000119446 237 ntBASIC0.27□□□□□ -2.37
Col4a3Q9QZS0 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC0.27□□□□□ -2.37
Col4a3Q9QZS0 Gm24487-201ENSMUST00000178017 63 ntBASIC0.27□□□□□ -2.37
Col4a3Q9QZS0 Gm25314-201ENSMUST00000178810 79 ntBASIC0.27□□□□□ -2.37
Col4a3Q9QZS0 Gm27402-201ENSMUST00000183890 120 ntBASIC0.27□□□□□ -2.37
Col4a3Q9QZS0 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
Col4a3Q9QZS0 Gm18185-201ENSMUST00000186725 667 ntBASIC0.27□□□□□ -2.37
Col4a3Q9QZS0 Gm44325-201ENSMUST00000196757 77 ntBASIC0.27□□□□□ -2.37
Col4a3Q9QZS0 Gm20144-201ENSMUST00000203031 165 ntBASIC0.27□□□□□ -2.37
Col4a3Q9QZS0 Gm45815-201ENSMUST00000220241 146 ntBASIC0.27□□□□□ -2.37
Col4a3Q9QZS0 AC110380.1-201ENSMUST00000226987 389 ntBASIC0.27□□□□□ -2.37
Col4a3Q9QZS0 Gm26164-201ENSMUST00000083793 104 ntBASIC0.27□□□□□ -2.37
Col4a3Q9QZS0 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.27□□□□□ -2.37
Col4a3Q9QZS0 Gm11859-201ENSMUST00000118099 455 ntBASIC0.27□□□□□ -2.37
Col4a3Q9QZS0 Gm11856-201ENSMUST00000118712 276 ntBASIC0.27□□□□□ -2.37
Col4a3Q9QZS0 Gm25825-201ENSMUST00000157091 124 ntBASIC0.27□□□□□ -2.37
Col4a3Q9QZS0 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC0.27□□□□□ -2.37
Col4a3Q9QZS0 Mir3079-201ENSMUST00000175428 90 ntBASIC0.27□□□□□ -2.37
Col4a3Q9QZS0 Gm23379-201ENSMUST00000180026 107 ntBASIC0.27□□□□□ -2.37
Col4a3Q9QZS0 Gm27717-201ENSMUST00000183933 151 ntBASIC0.27□□□□□ -2.37
Col4a3Q9QZS0 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC0.27□□□□□ -2.37
Col4a3Q9QZS0 AC125167.1-201ENSMUST00000198698 141 ntBASIC0.27□□□□□ -2.37
Col4a3Q9QZS0 Gm42857-201ENSMUST00000200823 339 ntBASIC0.27□□□□□ -2.37
Col4a3Q9QZS0 Gm23528-201ENSMUST00000104571 132 ntBASIC0.26□□□□□ -2.37
Col4a3Q9QZS0 Gm25559-201ENSMUST00000157182 74 ntBASIC0.26□□□□□ -2.37
Col4a3Q9QZS0 Gm23898-201ENSMUST00000158111 103 ntBASIC0.26□□□□□ -2.37
Col4a3Q9QZS0 Scarna8-201ENSMUST00000158333 131 ntBASIC0.26□□□□□ -2.37
Col4a3Q9QZS0 Gm24678-201ENSMUST00000158756 104 ntBASIC0.26□□□□□ -2.37
Col4a3Q9QZS0 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC0.26□□□□□ -2.37
Col4a3Q9QZS0 Gm16404-201ENSMUST00000177739 468 ntBASIC0.26□□□□□ -2.37
Col4a3Q9QZS0 Gm7958-201ENSMUST00000178255 468 ntBASIC0.26□□□□□ -2.37
Col4a3Q9QZS0 Gm7950-201ENSMUST00000179633 468 ntBASIC0.26□□□□□ -2.37
Col4a3Q9QZS0 Gm14598-201ENSMUST00000180109 468 ntBASIC0.26□□□□□ -2.37
Col4a3Q9QZS0 Gm14625-201ENSMUST00000180231 468 ntBASIC0.26□□□□□ -2.37
Col4a3Q9QZS0 Gm28921-201ENSMUST00000190219 378 ntBASIC0.26□□□□□ -2.37
Col4a3Q9QZS0 Gm44396-201ENSMUST00000199843 114 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 213.5 ms