Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC1.5□□□□□ -2.17
Cpsf3Q9QXK7 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC1.5□□□□□ -2.17
Cpsf3Q9QXK7 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.5□□□□□ -2.17
Cpsf3Q9QXK7 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC1.5□□□□□ -2.17
Cpsf3Q9QXK7 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.49□□□□□ -2.17
Cpsf3Q9QXK7 Gm24423-201ENSMUST00000101982 106 ntBASIC1.49□□□□□ -2.17
Cpsf3Q9QXK7 Gm22784-201ENSMUST00000104088 132 ntBASIC1.49□□□□□ -2.17
Cpsf3Q9QXK7 Gm24595-201ENSMUST00000122501 110 ntBASIC1.49□□□□□ -2.17
Cpsf3Q9QXK7 Gm26049-201ENSMUST00000157313 108 ntBASIC1.49□□□□□ -2.17
Cpsf3Q9QXK7 Mir7675-201ENSMUST00000184262 58 ntBASIC1.49□□□□□ -2.17
Cpsf3Q9QXK7 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC1.49□□□□□ -2.17
Cpsf3Q9QXK7 Gm29603-201ENSMUST00000186792 334 ntBASIC1.49□□□□□ -2.17
Cpsf3Q9QXK7 Gm44977-201ENSMUST00000205283 420 ntBASIC1.49□□□□□ -2.17
Cpsf3Q9QXK7 Snora19-201ENSMUST00000082962 132 ntBASIC1.49□□□□□ -2.17
Cpsf3Q9QXK7 Gm23658-201ENSMUST00000083233 132 ntBASIC1.49□□□□□ -2.17
Cpsf3Q9QXK7 Gm13560-201ENSMUST00000121865 329 ntBASIC1.48□□□□□ -2.17
Cpsf3Q9QXK7 Gm25825-201ENSMUST00000157091 124 ntBASIC1.48□□□□□ -2.17
Cpsf3Q9QXK7 Gm22963-201ENSMUST00000157960 91 ntBASIC1.48□□□□□ -2.17
Cpsf3Q9QXK7 Gm24677-201ENSMUST00000158755 150 ntBASIC1.48□□□□□ -2.17
Cpsf3Q9QXK7 Gm24229-201ENSMUST00000158830 118 ntBASIC1.48□□□□□ -2.17
Cpsf3Q9QXK7 Gm19123-201ENSMUST00000190716 651 ntBASIC1.48□□□□□ -2.17
Cpsf3Q9QXK7 Gm29014-201ENSMUST00000191422 326 ntBASIC1.48□□□□□ -2.17
Cpsf3Q9QXK7 Gm44325-201ENSMUST00000196757 77 ntBASIC1.48□□□□□ -2.17
Cpsf3Q9QXK7 AC164612.2-202ENSMUST00000216314 253 ntBASIC1.48□□□□□ -2.17
Cpsf3Q9QXK7 Snord14a-201ENSMUST00000082807 87 ntBASIC1.48□□□□□ -2.17
Cpsf3Q9QXK7 Gm22421-201ENSMUST00000083058 107 ntBASIC1.48□□□□□ -2.17
Cpsf3Q9QXK7 Gm24261-201ENSMUST00000083744 104 ntBASIC1.48□□□□□ -2.17
Cpsf3Q9QXK7 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.48□□□□□ -2.17
Cpsf3Q9QXK7 Gm25759-201ENSMUST00000103988 129 ntBASIC1.47□□□□□ -2.17
Cpsf3Q9QXK7 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC1.47□□□□□ -2.17
Cpsf3Q9QXK7 Gm14917-201ENSMUST00000118872 2105 ntBASIC1.47□□□□□ -2.17
Cpsf3Q9QXK7 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC1.47□□□□□ -2.17
Cpsf3Q9QXK7 Gm7258-201ENSMUST00000179317 300 ntBASIC1.47□□□□□ -2.17
Cpsf3Q9QXK7 Gm25936-201ENSMUST00000179952 114 ntBASIC1.47□□□□□ -2.17
Cpsf3Q9QXK7 Gm27545-201ENSMUST00000184755 202 ntBASIC1.47□□□□□ -2.17
Cpsf3Q9QXK7 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC1.47□□□□□ -2.17
Cpsf3Q9QXK7 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.47□□□□□ -2.17
Cpsf3Q9QXK7 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.46□□□□□ -2.18
Cpsf3Q9QXK7 Gm25068-201ENSMUST00000103895 110 ntBASIC1.46□□□□□ -2.18
Cpsf3Q9QXK7 Gm13711-201ENSMUST00000119708 453 ntBASIC1.46□□□□□ -2.18
Cpsf3Q9QXK7 Gm24635-201ENSMUST00000122712 128 ntBASIC1.46□□□□□ -2.18
Cpsf3Q9QXK7 Gm25362-201ENSMUST00000158854 105 ntBASIC1.46□□□□□ -2.18
Cpsf3Q9QXK7 Gm25235-201ENSMUST00000179933 107 ntBASIC1.46□□□□□ -2.18
Cpsf3Q9QXK7 Mir6336-201ENSMUST00000183581 130 ntBASIC1.46□□□□□ -2.18
Cpsf3Q9QXK7 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC1.46□□□□□ -2.18
Cpsf3Q9QXK7 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC1.46□□□□□ -2.18
Cpsf3Q9QXK7 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC1.46□□□□□ -2.18
Cpsf3Q9QXK7 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Cpsf3Q9QXK7 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Cpsf3Q9QXK7 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Cpsf3Q9QXK7 Gm24895-201ENSMUST00000122742 74 ntBASIC1.45□□□□□ -2.18
Cpsf3Q9QXK7 Snord13-201ENSMUST00000157627 104 ntBASIC1.45□□□□□ -2.18
Cpsf3Q9QXK7 Gm29022-201ENSMUST00000190702 225 ntBASIC1.45□□□□□ -2.18
Cpsf3Q9QXK7 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
Cpsf3Q9QXK7 AC157476.1-201ENSMUST00000215555 169 ntBASIC1.45□□□□□ -2.18
Cpsf3Q9QXK7 AC125020.2-201ENSMUST00000218894 348 ntBASIC1.45□□□□□ -2.18
Cpsf3Q9QXK7 Gm23336-201ENSMUST00000117023 123 ntBASIC1.44□□□□□ -2.18
Cpsf3Q9QXK7 Gm14846-201ENSMUST00000121868 216 ntBASIC1.44□□□□□ -2.18
Cpsf3Q9QXK7 n-R5s188-201ENSMUST00000122646 105 ntBASIC1.44□□□□□ -2.18
Cpsf3Q9QXK7 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC1.44□□□□□ -2.18
Cpsf3Q9QXK7 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC1.44□□□□□ -2.18
Cpsf3Q9QXK7 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.44□□□□□ -2.18
Cpsf3Q9QXK7 CT010454.1-201ENSMUST00000225975 265 ntBASIC1.44□□□□□ -2.18
Cpsf3Q9QXK7 Gm23665-201ENSMUST00000158054 62 ntBASIC1.43□□□□□ -2.18
Cpsf3Q9QXK7 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC1.43□□□□□ -2.18
Cpsf3Q9QXK7 Gm28409-201ENSMUST00000187064 103 ntBASIC1.43□□□□□ -2.18
Cpsf3Q9QXK7 Gm34139-201ENSMUST00000196166 294 ntBASIC1.43□□□□□ -2.18
Cpsf3Q9QXK7 Gm42855-201ENSMUST00000197388 253 ntBASIC1.43□□□□□ -2.18
Cpsf3Q9QXK7 Gm44563-201ENSMUST00000207958 178 ntBASIC1.43□□□□□ -2.18
Cpsf3Q9QXK7 AC124182.1-201ENSMUST00000227091 321 ntBASIC1.43□□□□□ -2.18
Cpsf3Q9QXK7 Mir181b-2-201ENSMUST00000083644 89 ntBASIC1.43□□□□□ -2.18
Cpsf3Q9QXK7 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
Cpsf3Q9QXK7 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.42□□□□□ -2.18
Cpsf3Q9QXK7 Gm14536-201ENSMUST00000118324 138 ntBASIC1.42□□□□□ -2.18
Cpsf3Q9QXK7 Gm15027-201ENSMUST00000120922 138 ntBASIC1.42□□□□□ -2.18
Cpsf3Q9QXK7 Gm23219-201ENSMUST00000158123 87 ntBASIC1.42□□□□□ -2.18
Cpsf3Q9QXK7 Gm23194-201ENSMUST00000158813 105 ntBASIC1.42□□□□□ -2.18
Cpsf3Q9QXK7 Gm25643-201ENSMUST00000158874 103 ntBASIC1.42□□□□□ -2.18
Cpsf3Q9QXK7 Gm23002-201ENSMUST00000179221 107 ntBASIC1.42□□□□□ -2.18
Cpsf3Q9QXK7 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC1.42□□□□□ -2.18
Cpsf3Q9QXK7 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.42□□□□□ -2.18
Cpsf3Q9QXK7 Gm25636-201ENSMUST00000082666 133 ntBASIC1.42□□□□□ -2.18
Cpsf3Q9QXK7 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
Cpsf3Q9QXK7 Gm22545-201ENSMUST00000104350 132 ntBASIC1.41□□□□□ -2.18
Cpsf3Q9QXK7 Gm24915-201ENSMUST00000157288 78 ntBASIC1.41□□□□□ -2.18
Cpsf3Q9QXK7 Gm26004-201ENSMUST00000158804 116 ntBASIC1.41□□□□□ -2.18
Cpsf3Q9QXK7 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC1.41□□□□□ -2.18
Cpsf3Q9QXK7 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC1.41□□□□□ -2.18
Cpsf3Q9QXK7 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.41□□□□□ -2.18
Cpsf3Q9QXK7 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Cpsf3Q9QXK7 Gm22358-201ENSMUST00000082877 122 ntBASIC1.41□□□□□ -2.18
Cpsf3Q9QXK7 Gm24453-201ENSMUST00000083346 76 ntBASIC1.41□□□□□ -2.18
Cpsf3Q9QXK7 Gm25188-201ENSMUST00000083913 122 ntBASIC1.41□□□□□ -2.18
Cpsf3Q9QXK7 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Cpsf3Q9QXK7 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.4□□□□□ -2.18
Cpsf3Q9QXK7 Gm16032-201ENSMUST00000118534 168 ntBASIC1.4□□□□□ -2.19
Cpsf3Q9QXK7 Gm26482-201ENSMUST00000158015 62 ntBASIC1.4□□□□□ -2.19
Cpsf3Q9QXK7 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.4□□□□□ -2.19
Cpsf3Q9QXK7 Gm23571-201ENSMUST00000180073 127 ntBASIC1.4□□□□□ -2.19
Cpsf3Q9QXK7 Mir7063-201ENSMUST00000184158 91 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 482.2 ms