Protein–RNA interactions for Protein: Q9QXD8

Limd1, LIM domain-containing protein 1, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limd1Q9QXD8 Gm28328-201ENSMUST00000188869 109 ntBASIC3.41□□□□□ -1.86
Limd1Q9QXD8 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC3.41□□□□□ -1.86
Limd1Q9QXD8 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC3.41□□□□□ -1.86
Limd1Q9QXD8 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Limd1Q9QXD8 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.41□□□□□ -1.86
Limd1Q9QXD8 AC132221.1-201ENSMUST00000220577 3841 ntBASIC3.41□□□□□ -1.86
Limd1Q9QXD8 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
Limd1Q9QXD8 Gm42445-201ENSMUST00000196996 2893 ntBASIC3.41□□□□□ -1.86
Limd1Q9QXD8 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Limd1Q9QXD8 Gm43032-201ENSMUST00000197967 3123 ntBASIC3.4□□□□□ -1.86
Limd1Q9QXD8 Gm16355-201ENSMUST00000128606 231 ntBASIC3.4□□□□□ -1.87
Limd1Q9QXD8 Gm24913-201ENSMUST00000157286 107 ntBASIC3.4□□□□□ -1.87
Limd1Q9QXD8 Mir3083-201ENSMUST00000175377 64 ntBASIC3.4□□□□□ -1.87
Limd1Q9QXD8 Gm28002-201ENSMUST00000184832 100 ntBASIC3.4□□□□□ -1.87
Limd1Q9QXD8 Mir6914-201ENSMUST00000184999 69 ntBASIC3.4□□□□□ -1.87
Limd1Q9QXD8 AC126939.1-201ENSMUST00000224943 226 ntBASIC3.4□□□□□ -1.87
Limd1Q9QXD8 AC168056.1-201ENSMUST00000225270 180 ntBASIC3.4□□□□□ -1.87
Limd1Q9QXD8 Gm26326-201ENSMUST00000083070 129 ntBASIC3.4□□□□□ -1.87
Limd1Q9QXD8 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC3.4□□□□□ -1.87
Limd1Q9QXD8 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
Limd1Q9QXD8 AC154386.1-201ENSMUST00000222753 2871 ntBASIC3.4□□□□□ -1.87
Limd1Q9QXD8 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
Limd1Q9QXD8 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Limd1Q9QXD8 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Limd1Q9QXD8 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Limd1Q9QXD8 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Limd1Q9QXD8 Gm24068-201ENSMUST00000104513 132 ntBASIC3.39□□□□□ -1.87
Limd1Q9QXD8 Gm22033-201ENSMUST00000116947 90 ntBASIC3.39□□□□□ -1.87
Limd1Q9QXD8 Gm23190-201ENSMUST00000180307 64 ntBASIC3.39□□□□□ -1.87
Limd1Q9QXD8 Gm43206-201ENSMUST00000197990 114 ntBASIC3.39□□□□□ -1.87
Limd1Q9QXD8 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.39□□□□□ -1.87
Limd1Q9QXD8 Gm24038-201ENSMUST00000082872 159 ntBASIC3.39□□□□□ -1.87
Limd1Q9QXD8 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.39□□□□□ -1.87
Limd1Q9QXD8 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.39□□□□□ -1.87
Limd1Q9QXD8 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC3.39□□□□□ -1.87
Limd1Q9QXD8 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC3.39□□□□□ -1.87
Limd1Q9QXD8 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC3.38□□□□□ -1.87
Limd1Q9QXD8 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Limd1Q9QXD8 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC3.38□□□□□ -1.87
Limd1Q9QXD8 Gm23652-201ENSMUST00000116752 107 ntBASIC3.38□□□□□ -1.87
Limd1Q9QXD8 Gm26215-201ENSMUST00000158584 139 ntBASIC3.38□□□□□ -1.87
Limd1Q9QXD8 Mir6377-201ENSMUST00000183760 114 ntBASIC3.38□□□□□ -1.87
Limd1Q9QXD8 CT571266.1-201ENSMUST00000222859 153 ntBASIC3.38□□□□□ -1.87
Limd1Q9QXD8 Snora70-201ENSMUST00000083047 137 ntBASIC3.38□□□□□ -1.87
Limd1Q9QXD8 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Limd1Q9QXD8 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Limd1Q9QXD8 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Limd1Q9QXD8 Gm37320-201ENSMUST00000192781 4953 ntBASIC3.37□□□□□ -1.87
Limd1Q9QXD8 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Limd1Q9QXD8 Gm22535-201ENSMUST00000158174 119 ntBASIC3.37□□□□□ -1.87
Limd1Q9QXD8 Gm6788-201ENSMUST00000166459 270 ntBASIC3.37□□□□□ -1.87
Limd1Q9QXD8 Mir3094-201ENSMUST00000175121 64 ntBASIC3.37□□□□□ -1.87
Limd1Q9QXD8 Gm27379-201ENSMUST00000183730 123 ntBASIC3.37□□□□□ -1.87
Limd1Q9QXD8 Mir8096-201ENSMUST00000184526 127 ntBASIC3.37□□□□□ -1.87
Limd1Q9QXD8 Mir3961-201ENSMUST00000198795 59 ntBASIC3.37□□□□□ -1.87
Limd1Q9QXD8 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Limd1Q9QXD8 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC3.37□□□□□ -1.87
Limd1Q9QXD8 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
Limd1Q9QXD8 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Limd1Q9QXD8 Gm38162-201ENSMUST00000195562 4597 ntBASIC3.37□□□□□ -1.87
Limd1Q9QXD8 Gm14917-201ENSMUST00000118872 2105 ntBASIC3.37□□□□□ -1.87
Limd1Q9QXD8 Gm42801-201ENSMUST00000202562 2865 ntBASIC3.37□□□□□ -1.87
Limd1Q9QXD8 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Limd1Q9QXD8 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Limd1Q9QXD8 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Limd1Q9QXD8 Gm14843-201ENSMUST00000119596 212 ntBASIC3.36□□□□□ -1.87
Limd1Q9QXD8 Gm23898-201ENSMUST00000158111 103 ntBASIC3.36□□□□□ -1.87
Limd1Q9QXD8 Mir3965-201ENSMUST00000175570 69 ntBASIC3.36□□□□□ -1.87
Limd1Q9QXD8 Mir6353-201ENSMUST00000183596 113 ntBASIC3.36□□□□□ -1.87
Limd1Q9QXD8 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC3.36□□□□□ -1.87
Limd1Q9QXD8 Gm45544-201ENSMUST00000211130 88 ntBASIC3.36□□□□□ -1.87
Limd1Q9QXD8 Gm18346-201ENSMUST00000216782 325 ntBASIC3.36□□□□□ -1.87
Limd1Q9QXD8 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC3.36□□□□□ -1.87
Limd1Q9QXD8 AC124687.1-201ENSMUST00000221868 189 ntBASIC3.36□□□□□ -1.87
Limd1Q9QXD8 mt-Ts2-201ENSMUST00000082416 59 ntBASIC3.36□□□□□ -1.87
Limd1Q9QXD8 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Limd1Q9QXD8 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
Limd1Q9QXD8 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
Limd1Q9QXD8 Gm27878-201ENSMUST00000184000 106 ntBASIC3.35□□□□□ -1.87
Limd1Q9QXD8 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC3.35□□□□□ -1.87
Limd1Q9QXD8 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC3.35□□□□□ -1.87
Limd1Q9QXD8 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.35□□□□□ -1.87
Limd1Q9QXD8 Gm23507-201ENSMUST00000083078 107 ntBASIC3.35□□□□□ -1.87
Limd1Q9QXD8 Gm25628-201ENSMUST00000084002 105 ntBASIC3.35□□□□□ -1.87
Limd1Q9QXD8 Snora33-201ENSMUST00000093556 129 ntBASIC3.35□□□□□ -1.87
Limd1Q9QXD8 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Limd1Q9QXD8 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.34□□□□□ -1.87
Limd1Q9QXD8 n-R5s15-201ENSMUST00000122635 111 ntBASIC3.34□□□□□ -1.87
Limd1Q9QXD8 Gm23390-201ENSMUST00000157393 106 ntBASIC3.34□□□□□ -1.87
Limd1Q9QXD8 Gm25884-201ENSMUST00000157782 62 ntBASIC3.34□□□□□ -1.87
Limd1Q9QXD8 Gm24958-201ENSMUST00000158009 97 ntBASIC3.34□□□□□ -1.87
Limd1Q9QXD8 Gm26214-201ENSMUST00000158581 107 ntBASIC3.34□□□□□ -1.87
Limd1Q9QXD8 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.34□□□□□ -1.87
Limd1Q9QXD8 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC3.34□□□□□ -1.87
Limd1Q9QXD8 Gm23738-201ENSMUST00000082828 171 ntBASIC3.34□□□□□ -1.87
Limd1Q9QXD8 Mir301-201ENSMUST00000083655 86 ntBASIC3.34□□□□□ -1.87
Limd1Q9QXD8 Gm42635-201ENSMUST00000200266 2571 ntBASIC3.34□□□□□ -1.88
Limd1Q9QXD8 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
Limd1Q9QXD8 Gm43879-201ENSMUST00000203811 3760 ntBASIC3.33□□□□□ -1.88
Limd1Q9QXD8 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 96.6 ms