Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
Msh5Q9QUM7 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
Msh5Q9QUM7 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Msh5Q9QUM7 AC124572.2-201ENSMUST00000218041 5152 ntBASIC3.77□□□□□ -1.81
Msh5Q9QUM7 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
Msh5Q9QUM7 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC3.77□□□□□ -1.81
Msh5Q9QUM7 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Msh5Q9QUM7 Gm22789-201ENSMUST00000157884 130 ntBASIC3.77□□□□□ -1.81
Msh5Q9QUM7 Gm20693-201ENSMUST00000177431 211 ntBASIC3.77□□□□□ -1.81
Msh5Q9QUM7 Gm44491-201ENSMUST00000196794 96 ntBASIC3.77□□□□□ -1.81
Msh5Q9QUM7 Gm44807-201ENSMUST00000206115 154 ntBASIC3.77□□□□□ -1.81
Msh5Q9QUM7 Gm45796-201ENSMUST00000212483 114 ntBASIC3.77□□□□□ -1.81
Msh5Q9QUM7 AC122769.2-201ENSMUST00000227248 302 ntBASIC3.77□□□□□ -1.81
Msh5Q9QUM7 Gm25480-201ENSMUST00000083217 133 ntBASIC3.77□□□□□ -1.81
Msh5Q9QUM7 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Msh5Q9QUM7 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Msh5Q9QUM7 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC3.76□□□□□ -1.81
Msh5Q9QUM7 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
Msh5Q9QUM7 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Msh5Q9QUM7 Gm22758-201ENSMUST00000102275 96 ntBASIC3.76□□□□□ -1.81
Msh5Q9QUM7 Gm25765-201ENSMUST00000104100 132 ntBASIC3.76□□□□□ -1.81
Msh5Q9QUM7 Gm15466-201ENSMUST00000122299 333 ntBASIC3.76□□□□□ -1.81
Msh5Q9QUM7 Gm25427-201ENSMUST00000157605 103 ntBASIC3.76□□□□□ -1.81
Msh5Q9QUM7 Gm22011-201ENSMUST00000158790 123 ntBASIC3.76□□□□□ -1.81
Msh5Q9QUM7 Gm22120-201ENSMUST00000175590 70 ntBASIC3.76□□□□□ -1.81
Msh5Q9QUM7 Gm5224-201ENSMUST00000183060 350 ntBASIC3.76□□□□□ -1.81
Msh5Q9QUM7 Mir129b-201ENSMUST00000197461 65 ntBASIC3.76□□□□□ -1.81
Msh5Q9QUM7 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Msh5Q9QUM7 Snora20-201ENSMUST00000082703 128 ntBASIC3.76□□□□□ -1.81
Msh5Q9QUM7 Gm26207-201ENSMUST00000082909 104 ntBASIC3.76□□□□□ -1.81
Msh5Q9QUM7 Mir346-201ENSMUST00000083547 98 ntBASIC3.76□□□□□ -1.81
Msh5Q9QUM7 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Msh5Q9QUM7 Gm23271-201ENSMUST00000104052 124 ntBASIC3.75□□□□□ -1.81
Msh5Q9QUM7 n-R5s191-201ENSMUST00000122724 116 ntBASIC3.75□□□□□ -1.81
Msh5Q9QUM7 Gm25371-201ENSMUST00000158162 101 ntBASIC3.75□□□□□ -1.81
Msh5Q9QUM7 Gm23816-201ENSMUST00000179617 132 ntBASIC3.75□□□□□ -1.81
Msh5Q9QUM7 Gm37290-201ENSMUST00000195775 339 ntBASIC3.75□□□□□ -1.81
Msh5Q9QUM7 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC3.75□□□□□ -1.81
Msh5Q9QUM7 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Msh5Q9QUM7 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Msh5Q9QUM7 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.75□□□□□ -1.81
Msh5Q9QUM7 AC159193.2-201ENSMUST00000220865 4251 ntBASIC3.74□□□□□ -1.81
Msh5Q9QUM7 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
Msh5Q9QUM7 Gm24000-201ENSMUST00000158063 89 ntBASIC3.74□□□□□ -1.81
Msh5Q9QUM7 Gm25901-201ENSMUST00000158494 130 ntBASIC3.74□□□□□ -1.81
Msh5Q9QUM7 Gm22890-201ENSMUST00000158642 144 ntBASIC3.74□□□□□ -1.81
Msh5Q9QUM7 Gm23477-201ENSMUST00000158882 128 ntBASIC3.74□□□□□ -1.81
Msh5Q9QUM7 Gm16584-201ENSMUST00000159267 189 ntBASIC3.74□□□□□ -1.81
Msh5Q9QUM7 Mir713-201ENSMUST00000178651 108 ntBASIC3.74□□□□□ -1.81
Msh5Q9QUM7 Gm25618-201ENSMUST00000179484 107 ntBASIC3.74□□□□□ -1.81
Msh5Q9QUM7 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC3.74□□□□□ -1.81
Msh5Q9QUM7 Gm25199-201ENSMUST00000083095 104 ntBASIC3.74□□□□□ -1.81
Msh5Q9QUM7 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
Msh5Q9QUM7 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
Msh5Q9QUM7 Gm38706-201ENSMUST00000182397 2617 ntBASIC3.74□□□□□ -1.81
Msh5Q9QUM7 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
Msh5Q9QUM7 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Msh5Q9QUM7 AC153966.1-201ENSMUST00000220106 3764 ntBASIC3.73□□□□□ -1.81
Msh5Q9QUM7 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.73□□□□□ -1.81
Msh5Q9QUM7 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Msh5Q9QUM7 Gm9119-201ENSMUST00000118866 495 ntBASIC3.73□□□□□ -1.81
Msh5Q9QUM7 Gm23257-201ENSMUST00000158322 132 ntBASIC3.73□□□□□ -1.81
Msh5Q9QUM7 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC3.73□□□□□ -1.81
Msh5Q9QUM7 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Msh5Q9QUM7 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC3.72□□□□□ -1.81
Msh5Q9QUM7 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Msh5Q9QUM7 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
Msh5Q9QUM7 Gm23365-201ENSMUST00000175019 125 ntBASIC3.72□□□□□ -1.81
Msh5Q9QUM7 Gm25960-201ENSMUST00000175110 125 ntBASIC3.72□□□□□ -1.81
Msh5Q9QUM7 Gm44453-201ENSMUST00000175161 126 ntBASIC3.72□□□□□ -1.81
Msh5Q9QUM7 Gm25195-201ENSMUST00000177656 126 ntBASIC3.72□□□□□ -1.81
Msh5Q9QUM7 AC157278.1-201ENSMUST00000221621 148 ntBASIC3.72□□□□□ -1.81
Msh5Q9QUM7 Gm25124-201ENSMUST00000083345 164 ntBASIC3.72□□□□□ -1.81
Msh5Q9QUM7 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
Msh5Q9QUM7 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
Msh5Q9QUM7 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Msh5Q9QUM7 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.81
Msh5Q9QUM7 Gm45884-201ENSMUST00000209540 3416 ntBASIC3.71□□□□□ -1.82
Msh5Q9QUM7 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
Msh5Q9QUM7 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
Msh5Q9QUM7 Snord92-201ENSMUST00000175548 85 ntBASIC3.71□□□□□ -1.82
Msh5Q9QUM7 Gm37081-201ENSMUST00000192034 196 ntBASIC3.71□□□□□ -1.82
Msh5Q9QUM7 Gm45471-201ENSMUST00000211270 281 ntBASIC3.71□□□□□ -1.82
Msh5Q9QUM7 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.71□□□□□ -1.82
Msh5Q9QUM7 Gm25899-201ENSMUST00000082672 141 ntBASIC3.71□□□□□ -1.82
Msh5Q9QUM7 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
Msh5Q9QUM7 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Msh5Q9QUM7 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Msh5Q9QUM7 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Msh5Q9QUM7 Gm26418-201ENSMUST00000104275 137 ntBASIC3.7□□□□□ -1.82
Msh5Q9QUM7 Gm14881-201ENSMUST00000120366 372 ntBASIC3.7□□□□□ -1.82
Msh5Q9QUM7 Gm13862-201ENSMUST00000121220 197 ntBASIC3.7□□□□□ -1.82
Msh5Q9QUM7 Gm22501-201ENSMUST00000158981 127 ntBASIC3.7□□□□□ -1.82
Msh5Q9QUM7 Mir6402-201ENSMUST00000183406 80 ntBASIC3.7□□□□□ -1.82
Msh5Q9QUM7 Mir7676-1-201ENSMUST00000183491 62 ntBASIC3.7□□□□□ -1.82
Msh5Q9QUM7 Mir7676-2-201ENSMUST00000183523 62 ntBASIC3.7□□□□□ -1.82
Msh5Q9QUM7 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Msh5Q9QUM7 Mir124a-3-201ENSMUST00000083520 68 ntBASIC3.7□□□□□ -1.82
Msh5Q9QUM7 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.7□□□□□ -1.82
Msh5Q9QUM7 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.69□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms