Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm25506-201ENSMUST00000104339 70 ntBASIC0.48□□□□□ -2.33
Trem1Q9JKE2 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC0.48□□□□□ -2.33
Trem1Q9JKE2 Gm14761-201ENSMUST00000121363 262 ntBASIC0.48□□□□□ -2.33
Trem1Q9JKE2 Gm22985-201ENSMUST00000122754 116 ntBASIC0.48□□□□□ -2.33
Trem1Q9JKE2 Gm23665-201ENSMUST00000158054 62 ntBASIC0.48□□□□□ -2.33
Trem1Q9JKE2 Gm25643-201ENSMUST00000158874 103 ntBASIC0.48□□□□□ -2.33
Trem1Q9JKE2 Gm26400-201ENSMUST00000175012 85 ntBASIC0.48□□□□□ -2.33
Trem1Q9JKE2 Gm26236-201ENSMUST00000175536 137 ntBASIC0.48□□□□□ -2.33
Trem1Q9JKE2 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
Trem1Q9JKE2 Gm43367-201ENSMUST00000199986 625 ntBASIC0.48□□□□□ -2.33
Trem1Q9JKE2 CT009696.1-201ENSMUST00000215745 256 ntBASIC0.48□□□□□ -2.33
Trem1Q9JKE2 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.48□□□□□ -2.33
Trem1Q9JKE2 Mir709-201ENSMUST00000102190 88 ntBASIC0.47□□□□□ -2.33
Trem1Q9JKE2 Gm23492-201ENSMUST00000116837 115 ntBASIC0.47□□□□□ -2.33
Trem1Q9JKE2 Gm14946-201ENSMUST00000119859 296 ntBASIC0.47□□□□□ -2.33
Trem1Q9JKE2 Gm25968-201ENSMUST00000157167 100 ntBASIC0.47□□□□□ -2.33
Trem1Q9JKE2 Gm22791-201ENSMUST00000157232 145 ntBASIC0.47□□□□□ -2.33
Trem1Q9JKE2 Mir7661-201ENSMUST00000197023 61 ntBASIC0.47□□□□□ -2.33
Trem1Q9JKE2 Gm25930-201ENSMUST00000082785 107 ntBASIC0.47□□□□□ -2.33
Trem1Q9JKE2 Gm14536-201ENSMUST00000118324 138 ntBASIC0.46□□□□□ -2.34
Trem1Q9JKE2 Gm11572-201ENSMUST00000119164 120 ntBASIC0.46□□□□□ -2.34
Trem1Q9JKE2 Gm15027-201ENSMUST00000120922 138 ntBASIC0.46□□□□□ -2.34
Trem1Q9JKE2 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC0.46□□□□□ -2.34
Trem1Q9JKE2 Mir465d-201ENSMUST00000196314 58 ntBASIC0.46□□□□□ -2.34
Trem1Q9JKE2 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.46□□□□□ -2.34
Trem1Q9JKE2 Gm25078-201ENSMUST00000082530 107 ntBASIC0.46□□□□□ -2.34
Trem1Q9JKE2 Mir496a-201ENSMUST00000093627 79 ntBASIC0.46□□□□□ -2.34
Trem1Q9JKE2 Gm22883-201ENSMUST00000157376 106 ntBASIC0.45□□□□□ -2.34
Trem1Q9JKE2 Mir3109-201ENSMUST00000175301 88 ntBASIC0.45□□□□□ -2.34
Trem1Q9JKE2 Gm10105-201ENSMUST00000184601 270 ntBASIC0.45□□□□□ -2.34
Trem1Q9JKE2 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC0.45□□□□□ -2.34
Trem1Q9JKE2 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.45□□□□□ -2.34
Trem1Q9JKE2 Gm24527-201ENSMUST00000082920 107 ntBASIC0.45□□□□□ -2.34
Trem1Q9JKE2 Gm3788-201ENSMUST00000119949 136 ntBASIC0.44□□□□□ -2.34
Trem1Q9JKE2 Gm24595-201ENSMUST00000122501 110 ntBASIC0.44□□□□□ -2.34
Trem1Q9JKE2 Gm23329-201ENSMUST00000157415 108 ntBASIC0.44□□□□□ -2.34
Trem1Q9JKE2 Gm23759-201ENSMUST00000158351 268 ntBASIC0.44□□□□□ -2.34
Trem1Q9JKE2 Gm24499-201ENSMUST00000158446 104 ntBASIC0.44□□□□□ -2.34
Trem1Q9JKE2 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.44□□□□□ -2.34
Trem1Q9JKE2 Gm44948-201ENSMUST00000209050 149 ntBASIC0.44□□□□□ -2.34
Trem1Q9JKE2 Gm23011-201ENSMUST00000104148 132 ntBASIC0.43□□□□□ -2.34
Trem1Q9JKE2 Gm16265-201ENSMUST00000134558 108 ntBASIC0.43□□□□□ -2.34
Trem1Q9JKE2 Gm24909-201ENSMUST00000157290 280 ntBASIC0.43□□□□□ -2.34
Trem1Q9JKE2 Gm23328-201ENSMUST00000157418 132 ntBASIC0.43□□□□□ -2.34
Trem1Q9JKE2 Gm22163-201ENSMUST00000158408 135 ntBASIC0.43□□□□□ -2.34
Trem1Q9JKE2 Gm23113-201ENSMUST00000158477 99 ntBASIC0.43□□□□□ -2.34
Trem1Q9JKE2 Mir7059-201ENSMUST00000184825 59 ntBASIC0.43□□□□□ -2.34
Trem1Q9JKE2 Gm28256-201ENSMUST00000188953 139 ntBASIC0.43□□□□□ -2.34
Trem1Q9JKE2 Gm28330-201ENSMUST00000190353 171 ntBASIC0.43□□□□□ -2.34
Trem1Q9JKE2 Gm28559-201ENSMUST00000190532 139 ntBASIC0.43□□□□□ -2.34
Trem1Q9JKE2 Gm44063-201ENSMUST00000203307 376 ntBASIC0.43□□□□□ -2.34
Trem1Q9JKE2 Gm45508-201ENSMUST00000209298 299 ntBASIC0.43□□□□□ -2.34
Trem1Q9JKE2 Gm22283-201ENSMUST00000082556 161 ntBASIC0.43□□□□□ -2.34
Trem1Q9JKE2 Gm24624-201ENSMUST00000082617 164 ntBASIC0.43□□□□□ -2.34
Trem1Q9JKE2 Gm24042-201ENSMUST00000083114 103 ntBASIC0.43□□□□□ -2.34
Trem1Q9JKE2 Gm12432-201ENSMUST00000119540 186 ntBASIC0.42□□□□□ -2.34
Trem1Q9JKE2 Gm24385-201ENSMUST00000122694 350 ntBASIC0.42□□□□□ -2.34
Trem1Q9JKE2 Gm23182-201ENSMUST00000158688 135 ntBASIC0.42□□□□□ -2.34
Trem1Q9JKE2 Gm25671-201ENSMUST00000178612 105 ntBASIC0.42□□□□□ -2.34
Trem1Q9JKE2 Gm25450-201ENSMUST00000179144 107 ntBASIC0.42□□□□□ -2.34
Trem1Q9JKE2 Gm23307-201ENSMUST00000179167 105 ntBASIC0.42□□□□□ -2.34
Trem1Q9JKE2 Gm25286-201ENSMUST00000179790 105 ntBASIC0.42□□□□□ -2.34
Trem1Q9JKE2 Gm44352-201ENSMUST00000196358 110 ntBASIC0.42□□□□□ -2.34
Trem1Q9JKE2 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC0.42□□□□□ -2.34
Trem1Q9JKE2 AC110380.1-201ENSMUST00000226987 389 ntBASIC0.42□□□□□ -2.34
Trem1Q9JKE2 Gm37824-201ENSMUST00000193430 3236 ntBASIC0.42□□□□□ -2.34
Trem1Q9JKE2 Gm25781-201ENSMUST00000122527 84 ntBASIC0.41□□□□□ -2.34
Trem1Q9JKE2 Gm24000-201ENSMUST00000158063 89 ntBASIC0.41□□□□□ -2.34
Trem1Q9JKE2 Gm23024-201ENSMUST00000158770 292 ntBASIC0.41□□□□□ -2.34
Trem1Q9JKE2 Mir3968-201ENSMUST00000175355 100 ntBASIC0.41□□□□□ -2.34
Trem1Q9JKE2 Gm27289-201ENSMUST00000183341 82 ntBASIC0.41□□□□□ -2.34
Trem1Q9JKE2 Gm38060-201ENSMUST00000194822 464 ntBASIC0.41□□□□□ -2.34
Trem1Q9JKE2 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC0.41□□□□□ -2.34
Trem1Q9JKE2 Gm24616-201ENSMUST00000083274 139 ntBASIC0.41□□□□□ -2.34
Trem1Q9JKE2 Gm43960-201ENSMUST00000204249 5020 ntBASIC0.4□□□□□ -2.35
Trem1Q9JKE2 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
Trem1Q9JKE2 Gm24880-201ENSMUST00000158776 85 ntBASIC0.4□□□□□ -2.35
Trem1Q9JKE2 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC0.4□□□□□ -2.35
Trem1Q9JKE2 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
Trem1Q9JKE2 Gm37763-201ENSMUST00000193445 120 ntBASIC0.4□□□□□ -2.35
Trem1Q9JKE2 CT009713.9-201ENSMUST00000223604 389 ntBASIC0.4□□□□□ -2.35
Trem1Q9JKE2 Gm25855-201ENSMUST00000082787 72 ntBASIC0.4□□□□□ -2.35
Trem1Q9JKE2 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
Trem1Q9JKE2 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
Trem1Q9JKE2 Gm12748-201ENSMUST00000120763 504 ntBASIC0.39□□□□□ -2.35
Trem1Q9JKE2 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
Trem1Q9JKE2 Gm25827-201ENSMUST00000157089 107 ntBASIC0.39□□□□□ -2.35
Trem1Q9JKE2 Mir6240-201ENSMUST00000184281 117 ntBASIC0.39□□□□□ -2.35
Trem1Q9JKE2 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC0.39□□□□□ -2.35
Trem1Q9JKE2 AC108945.1-201ENSMUST00000226477 94 ntBASIC0.39□□□□□ -2.35
Trem1Q9JKE2 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC0.38□□□□□ -2.35
Trem1Q9JKE2 Gm14574-201ENSMUST00000120644 279 ntBASIC0.38□□□□□ -2.35
Trem1Q9JKE2 Gm23853-201ENSMUST00000158375 104 ntBASIC0.38□□□□□ -2.35
Trem1Q9JKE2 Gm22945-201ENSMUST00000158557 157 ntBASIC0.38□□□□□ -2.35
Trem1Q9JKE2 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC0.38□□□□□ -2.35
Trem1Q9JKE2 Mir376a-201ENSMUST00000197584 68 ntBASIC0.38□□□□□ -2.35
Trem1Q9JKE2 AL928567.1-201ENSMUST00000197891 138 ntBASIC0.38□□□□□ -2.35
Trem1Q9JKE2 Gm44488-201ENSMUST00000199467 119 ntBASIC0.38□□□□□ -2.35
Trem1Q9JKE2 Gm43911-201ENSMUST00000203097 76 ntBASIC0.38□□□□□ -2.35
Trem1Q9JKE2 Gm8219-201ENSMUST00000218309 242 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms