Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC-0.15□□□□□ -2.43
Trem3Q9JKE1 Gm44052-201ENSMUST00000203382 396 ntBASIC-0.15□□□□□ -2.43
Trem3Q9JKE1 Gm45374-201ENSMUST00000211388 136 ntBASIC-0.15□□□□□ -2.43
Trem3Q9JKE1 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC-0.15□□□□□ -2.43
Trem3Q9JKE1 Gm25801-201ENSMUST00000082638 106 ntBASIC-0.15□□□□□ -2.43
Trem3Q9JKE1 Gm22505-201ENSMUST00000082956 108 ntBASIC-0.15□□□□□ -2.43
Trem3Q9JKE1 Gm22363-201ENSMUST00000083100 108 ntBASIC-0.15□□□□□ -2.43
Trem3Q9JKE1 Gm23814-201ENSMUST00000083230 102 ntBASIC-0.15□□□□□ -2.43
Trem3Q9JKE1 Gm25859-201ENSMUST00000083710 91 ntBASIC-0.15□□□□□ -2.43
Trem3Q9JKE1 Mir463-201ENSMUST00000093570 75 ntBASIC-0.15□□□□□ -2.43
Trem3Q9JKE1 Mir582-201ENSMUST00000103758 81 ntBASIC-0.16□□□□□ -2.44
Trem3Q9JKE1 Snord69-201ENSMUST00000104024 80 ntBASIC-0.16□□□□□ -2.44
Trem3Q9JKE1 Gm24283-201ENSMUST00000104233 107 ntBASIC-0.16□□□□□ -2.44
Trem3Q9JKE1 Gm14287-201ENSMUST00000121060 117 ntBASIC-0.16□□□□□ -2.44
Trem3Q9JKE1 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC-0.16□□□□□ -2.44
Trem3Q9JKE1 Gm23584-201ENSMUST00000157655 129 ntBASIC-0.16□□□□□ -2.44
Trem3Q9JKE1 Gm44455-201ENSMUST00000200061 82 ntBASIC-0.16□□□□□ -2.44
Trem3Q9JKE1 Gm14491-201ENSMUST00000121919 199 ntBASIC-0.17□□□□□ -2.44
Trem3Q9JKE1 Gm14413-201ENSMUST00000122158 408 ntBASIC-0.17□□□□□ -2.44
Trem3Q9JKE1 Gm25434-201ENSMUST00000158278 167 ntBASIC-0.17□□□□□ -2.44
Trem3Q9JKE1 Gm22431-201ENSMUST00000158545 107 ntBASIC-0.17□□□□□ -2.44
Trem3Q9JKE1 Gm37337-201ENSMUST00000192601 993 ntBASIC-0.17□□□□□ -2.44
Trem3Q9JKE1 AC147101.1-201ENSMUST00000217964 312 ntBASIC-0.17□□□□□ -2.44
Trem3Q9JKE1 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC-0.17□□□□□ -2.44
Trem3Q9JKE1 Gm22021-201ENSMUST00000104353 107 ntBASIC-0.18□□□□□ -2.44
Trem3Q9JKE1 Gm23989-201ENSMUST00000117030 66 ntBASIC-0.18□□□□□ -2.44
Trem3Q9JKE1 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC-0.18□□□□□ -2.44
Trem3Q9JKE1 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC-0.18□□□□□ -2.44
Trem3Q9JKE1 Gm23113-201ENSMUST00000158477 99 ntBASIC-0.18□□□□□ -2.44
Trem3Q9JKE1 Gm24549-201ENSMUST00000158647 139 ntBASIC-0.18□□□□□ -2.44
Trem3Q9JKE1 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC-0.18□□□□□ -2.44
Trem3Q9JKE1 Gm28506-201ENSMUST00000189937 150 ntBASIC-0.18□□□□□ -2.44
Trem3Q9JKE1 Mir6896-201ENSMUST00000198033 73 ntBASIC-0.18□□□□□ -2.44
Trem3Q9JKE1 Gm43367-201ENSMUST00000199986 625 ntBASIC-0.18□□□□□ -2.44
Trem3Q9JKE1 Gm44055-201ENSMUST00000204376 247 ntBASIC-0.18□□□□□ -2.44
Trem3Q9JKE1 AL929265.1-201ENSMUST00000213427 125 ntBASIC-0.18□□□□□ -2.44
Trem3Q9JKE1 Gm22685-201ENSMUST00000082848 106 ntBASIC-0.18□□□□□ -2.44
Trem3Q9JKE1 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC-0.18□□□□□ -2.44
Trem3Q9JKE1 Gm25110-201ENSMUST00000116684 121 ntBASIC-0.19□□□□□ -2.44
Trem3Q9JKE1 Gm25775-201ENSMUST00000116716 121 ntBASIC-0.19□□□□□ -2.44
Trem3Q9JKE1 Gm24795-201ENSMUST00000116737 121 ntBASIC-0.19□□□□□ -2.44
Trem3Q9JKE1 Gm25171-201ENSMUST00000116926 121 ntBASIC-0.19□□□□□ -2.44
Trem3Q9JKE1 Gm13711-201ENSMUST00000119708 453 ntBASIC-0.19□□□□□ -2.44
Trem3Q9JKE1 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC-0.19□□□□□ -2.44
Trem3Q9JKE1 Gm24909-201ENSMUST00000157290 280 ntBASIC-0.19□□□□□ -2.44
Trem3Q9JKE1 Gm25882-201ENSMUST00000157784 85 ntBASIC-0.19□□□□□ -2.44
Trem3Q9JKE1 Gm24000-201ENSMUST00000158063 89 ntBASIC-0.19□□□□□ -2.44
Trem3Q9JKE1 Gm24901-201ENSMUST00000158125 110 ntBASIC-0.19□□□□□ -2.44
Trem3Q9JKE1 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC-0.19□□□□□ -2.44
Trem3Q9JKE1 Gm22166-201ENSMUST00000178419 121 ntBASIC-0.19□□□□□ -2.44
Trem3Q9JKE1 Gm23288-201ENSMUST00000179213 121 ntBASIC-0.19□□□□□ -2.44
Trem3Q9JKE1 Mir6346-201ENSMUST00000183982 81 ntBASIC-0.19□□□□□ -2.44
Trem3Q9JKE1 Mir7229-201ENSMUST00000197062 53 ntBASIC-0.19□□□□□ -2.44
Trem3Q9JKE1 Gm5001-201ENSMUST00000204361 331 ntBASIC-0.19□□□□□ -2.44
Trem3Q9JKE1 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC-0.19□□□□□ -2.44
Trem3Q9JKE1 Gm45543-201ENSMUST00000209327 88 ntBASIC-0.19□□□□□ -2.44
Trem3Q9JKE1 Mir200a-201ENSMUST00000083466 90 ntBASIC-0.19□□□□□ -2.44
Trem3Q9JKE1 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC-0.19□□□□□ -2.44
Trem3Q9JKE1 AC160115.1-201ENSMUST00000224678 1574 ntBASIC-0.19□□□□□ -2.44
Trem3Q9JKE1 Gm25416-201ENSMUST00000104221 107 ntBASIC-0.2□□□□□ -2.44
Trem3Q9JKE1 Gm25309-201ENSMUST00000116728 126 ntBASIC-0.2□□□□□ -2.44
Trem3Q9JKE1 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC-0.2□□□□□ -2.44
Trem3Q9JKE1 Gm11904-201ENSMUST00000120562 248 ntBASIC-0.2□□□□□ -2.44
Trem3Q9JKE1 Gm22466-201ENSMUST00000175278 69 ntBASIC-0.2□□□□□ -2.44
Trem3Q9JKE1 Gm24575-201ENSMUST00000175502 77 ntBASIC-0.2□□□□□ -2.44
Trem3Q9JKE1 Gm24487-201ENSMUST00000178017 63 ntBASIC-0.2□□□□□ -2.44
Trem3Q9JKE1 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC-0.2□□□□□ -2.44
Trem3Q9JKE1 Gm18185-201ENSMUST00000186725 667 ntBASIC-0.2□□□□□ -2.44
Trem3Q9JKE1 Gm45508-201ENSMUST00000209298 299 ntBASIC-0.2□□□□□ -2.44
Trem3Q9JKE1 CT030645.1-201ENSMUST00000224020 231 ntBASIC-0.2□□□□□ -2.44
Trem3Q9JKE1 Gm23515-201ENSMUST00000082829 107 ntBASIC-0.2□□□□□ -2.44
Trem3Q9JKE1 Mirlet7g-201ENSMUST00000083506 88 ntBASIC-0.2□□□□□ -2.44
Trem3Q9JKE1 Mir410-201ENSMUST00000083563 81 ntBASIC-0.2□□□□□ -2.44
Trem3Q9JKE1 Gm10730-201ENSMUST00000194097 2723 ntBASIC-0.21□□□□□ -2.44
Trem3Q9JKE1 Gm23126-201ENSMUST00000104260 134 ntBASIC-0.21□□□□□ -2.44
Trem3Q9JKE1 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC-0.21□□□□□ -2.44
Trem3Q9JKE1 Gm24547-201ENSMUST00000158649 149 ntBASIC-0.21□□□□□ -2.44
Trem3Q9JKE1 Gm25163-201ENSMUST00000158905 104 ntBASIC-0.21□□□□□ -2.44
Trem3Q9JKE1 Mir7010-201ENSMUST00000183464 63 ntBASIC-0.21□□□□□ -2.44
Trem3Q9JKE1 Gm45616-201ENSMUST00000211711 319 ntBASIC-0.21□□□□□ -2.44
Trem3Q9JKE1 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC-0.21□□□□□ -2.44
Trem3Q9JKE1 AC117202.2-201ENSMUST00000226491 1101 ntBASIC-0.21□□□□□ -2.44
Trem3Q9JKE1 Gm25586-201ENSMUST00000082499 112 ntBASIC-0.21□□□□□ -2.44
Trem3Q9JKE1 Mir672-201ENSMUST00000102331 100 ntBASIC-0.22□□□□□ -2.44
Trem3Q9JKE1 Gm11522-201ENSMUST00000120533 176 ntBASIC-0.22□□□□□ -2.44
Trem3Q9JKE1 Mir1951-201ENSMUST00000157981 89 ntBASIC-0.22□□□□□ -2.44
Trem3Q9JKE1 Gm26022-201ENSMUST00000158663 108 ntBASIC-0.22□□□□□ -2.44
Trem3Q9JKE1 Gm16307-201ENSMUST00000161269 210 ntBASIC-0.22□□□□□ -2.44
Trem3Q9JKE1 Gm24321-201ENSMUST00000175348 80 ntBASIC-0.22□□□□□ -2.44
Trem3Q9JKE1 Gm26430-201ENSMUST00000178054 107 ntBASIC-0.22□□□□□ -2.44
Trem3Q9JKE1 Gm11392-201ENSMUST00000181419 710 ntBASIC-0.22□□□□□ -2.44
Trem3Q9JKE1 Gm6003-201ENSMUST00000187903 463 ntBASIC-0.22□□□□□ -2.44
Trem3Q9JKE1 Gm44063-201ENSMUST00000203307 376 ntBASIC-0.22□□□□□ -2.44
Trem3Q9JKE1 Gm45471-201ENSMUST00000211270 281 ntBASIC-0.22□□□□□ -2.44
Trem3Q9JKE1 AC192333.2-201ENSMUST00000224771 196 ntBASIC-0.22□□□□□ -2.44
Trem3Q9JKE1 Gm24042-201ENSMUST00000083114 103 ntBASIC-0.22□□□□□ -2.44
Trem3Q9JKE1 Mir767-201ENSMUST00000103256 107 ntBASIC-0.23□□□□□ -2.45
Trem3Q9JKE1 Gm25878-201ENSMUST00000104327 93 ntBASIC-0.23□□□□□ -2.45
Trem3Q9JKE1 Gm24595-201ENSMUST00000122501 110 ntBASIC-0.23□□□□□ -2.45
Trem3Q9JKE1 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC-0.23□□□□□ -2.45
Retrieved 100 of 76,532 protein–RNA pairs in 135.1 ms