Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.49□□□□□ -2.33
Lima1Q9ERG0 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
Lima1Q9ERG0 Gm36956-201ENSMUST00000193830 214 ntBASIC0.49□□□□□ -2.33
Lima1Q9ERG0 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.49□□□□□ -2.33
Lima1Q9ERG0 Gm24920-201ENSMUST00000083018 85 ntBASIC0.49□□□□□ -2.33
Lima1Q9ERG0 Mir34a-201ENSMUST00000083559 102 ntBASIC0.49□□□□□ -2.33
Lima1Q9ERG0 Mir767-201ENSMUST00000103256 107 ntBASIC0.48□□□□□ -2.33
Lima1Q9ERG0 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
Lima1Q9ERG0 Gm14980-201ENSMUST00000121247 736 ntBASIC0.48□□□□□ -2.33
Lima1Q9ERG0 Gm14491-201ENSMUST00000121919 199 ntBASIC0.48□□□□□ -2.33
Lima1Q9ERG0 Gm25783-201ENSMUST00000122525 190 ntBASIC0.48□□□□□ -2.33
Lima1Q9ERG0 Gm25781-201ENSMUST00000122527 84 ntBASIC0.48□□□□□ -2.33
Lima1Q9ERG0 Gm24379-201ENSMUST00000122695 86 ntBASIC0.48□□□□□ -2.33
Lima1Q9ERG0 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC0.48□□□□□ -2.33
Lima1Q9ERG0 Gm22522-201ENSMUST00000158271 151 ntBASIC0.48□□□□□ -2.33
Lima1Q9ERG0 Gm26022-201ENSMUST00000158663 108 ntBASIC0.48□□□□□ -2.33
Lima1Q9ERG0 Gm25976-201ENSMUST00000158695 130 ntBASIC0.48□□□□□ -2.33
Lima1Q9ERG0 Mir15a-201ENSMUST00000175266 84 ntBASIC0.48□□□□□ -2.33
Lima1Q9ERG0 Gm22565-201ENSMUST00000175540 69 ntBASIC0.48□□□□□ -2.33
Lima1Q9ERG0 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
Lima1Q9ERG0 Gm23148-201ENSMUST00000180367 107 ntBASIC0.48□□□□□ -2.33
Lima1Q9ERG0 Gm43884-201ENSMUST00000204251 559 ntBASIC0.48□□□□□ -2.33
Lima1Q9ERG0 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC0.48□□□□□ -2.33
Lima1Q9ERG0 Gm25204-201ENSMUST00000082843 106 ntBASIC0.48□□□□□ -2.33
Lima1Q9ERG0 Gm25258-201ENSMUST00000083049 107 ntBASIC0.48□□□□□ -2.33
Lima1Q9ERG0 Gm24164-201ENSMUST00000093663 104 ntBASIC0.48□□□□□ -2.33
Lima1Q9ERG0 Gm14536-201ENSMUST00000118324 138 ntBASIC0.47□□□□□ -2.33
Lima1Q9ERG0 Gm12748-201ENSMUST00000120763 504 ntBASIC0.47□□□□□ -2.33
Lima1Q9ERG0 Gm15027-201ENSMUST00000120922 138 ntBASIC0.47□□□□□ -2.33
Lima1Q9ERG0 Gm14761-201ENSMUST00000121363 262 ntBASIC0.47□□□□□ -2.33
Lima1Q9ERG0 Gm22555-201ENSMUST00000157801 62 ntBASIC0.47□□□□□ -2.33
Lima1Q9ERG0 Gm24678-201ENSMUST00000158756 104 ntBASIC0.47□□□□□ -2.33
Lima1Q9ERG0 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC0.47□□□□□ -2.33
Lima1Q9ERG0 Gm10105-201ENSMUST00000184601 270 ntBASIC0.47□□□□□ -2.33
Lima1Q9ERG0 Gm43367-201ENSMUST00000199986 625 ntBASIC0.47□□□□□ -2.33
Lima1Q9ERG0 Gm44976-201ENSMUST00000205543 261 ntBASIC0.47□□□□□ -2.33
Lima1Q9ERG0 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.47□□□□□ -2.33
Lima1Q9ERG0 CT009713.9-201ENSMUST00000223604 389 ntBASIC0.47□□□□□ -2.33
Lima1Q9ERG0 Gm25078-201ENSMUST00000082530 107 ntBASIC0.47□□□□□ -2.33
Lima1Q9ERG0 Gm26056-201ENSMUST00000083043 104 ntBASIC0.47□□□□□ -2.33
Lima1Q9ERG0 Gm24116-201ENSMUST00000103975 107 ntBASIC0.46□□□□□ -2.34
Lima1Q9ERG0 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.46□□□□□ -2.34
Lima1Q9ERG0 Gm22883-201ENSMUST00000157376 106 ntBASIC0.46□□□□□ -2.34
Lima1Q9ERG0 Mir1951-201ENSMUST00000157981 89 ntBASIC0.46□□□□□ -2.34
Lima1Q9ERG0 Gm26400-201ENSMUST00000175012 85 ntBASIC0.46□□□□□ -2.34
Lima1Q9ERG0 Gm25671-201ENSMUST00000178612 105 ntBASIC0.46□□□□□ -2.34
Lima1Q9ERG0 Gm23307-201ENSMUST00000179167 105 ntBASIC0.46□□□□□ -2.34
Lima1Q9ERG0 Gm25286-201ENSMUST00000179790 105 ntBASIC0.46□□□□□ -2.34
Lima1Q9ERG0 Gm27365-201ENSMUST00000184041 177 ntBASIC0.46□□□□□ -2.34
Lima1Q9ERG0 Gm28435-201ENSMUST00000185496 108 ntBASIC0.46□□□□□ -2.34
Lima1Q9ERG0 Gm34783-201ENSMUST00000209159 303 ntBASIC0.46□□□□□ -2.34
Lima1Q9ERG0 AC108945.1-201ENSMUST00000226477 94 ntBASIC0.46□□□□□ -2.34
Lima1Q9ERG0 AC110380.1-201ENSMUST00000226987 389 ntBASIC0.46□□□□□ -2.34
Lima1Q9ERG0 Gm23851-201ENSMUST00000083831 103 ntBASIC0.46□□□□□ -2.34
Lima1Q9ERG0 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
Lima1Q9ERG0 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.45□□□□□ -2.34
Lima1Q9ERG0 Gm22482-201ENSMUST00000122563 359 ntBASIC0.45□□□□□ -2.34
Lima1Q9ERG0 Gm24630-201ENSMUST00000122768 106 ntBASIC0.45□□□□□ -2.34
Lima1Q9ERG0 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
Lima1Q9ERG0 Gm22796-201ENSMUST00000157234 106 ntBASIC0.45□□□□□ -2.34
Lima1Q9ERG0 Gm22888-201ENSMUST00000158640 77 ntBASIC0.45□□□□□ -2.34
Lima1Q9ERG0 Mir1961-201ENSMUST00000158643 112 ntBASIC0.45□□□□□ -2.34
Lima1Q9ERG0 Gm23182-201ENSMUST00000158688 135 ntBASIC0.45□□□□□ -2.34
Lima1Q9ERG0 Mir8116-201ENSMUST00000184134 97 ntBASIC0.45□□□□□ -2.34
Lima1Q9ERG0 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC0.45□□□□□ -2.34
Lima1Q9ERG0 Gm20923-201ENSMUST00000190009 319 ntBASIC0.45□□□□□ -2.34
Lima1Q9ERG0 Gm21088-201ENSMUST00000190875 316 ntBASIC0.45□□□□□ -2.34
Lima1Q9ERG0 Mir468-201ENSMUST00000197332 78 ntBASIC0.45□□□□□ -2.34
Lima1Q9ERG0 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.45□□□□□ -2.34
Lima1Q9ERG0 Gm26107-201ENSMUST00000083972 107 ntBASIC0.45□□□□□ -2.34
Lima1Q9ERG0 Gm25378-201ENSMUST00000104333 129 ntBASIC0.44□□□□□ -2.34
Lima1Q9ERG0 Gm12785-201ENSMUST00000122052 172 ntBASIC0.44□□□□□ -2.34
Lima1Q9ERG0 Gm24595-201ENSMUST00000122501 110 ntBASIC0.44□□□□□ -2.34
Lima1Q9ERG0 Gm23605-201ENSMUST00000157255 127 ntBASIC0.44□□□□□ -2.34
Lima1Q9ERG0 Gm22163-201ENSMUST00000158408 135 ntBASIC0.44□□□□□ -2.34
Lima1Q9ERG0 Gm22945-201ENSMUST00000158557 157 ntBASIC0.44□□□□□ -2.34
Lima1Q9ERG0 Gm25643-201ENSMUST00000158874 103 ntBASIC0.44□□□□□ -2.34
Lima1Q9ERG0 Mir376a-201ENSMUST00000197584 68 ntBASIC0.44□□□□□ -2.34
Lima1Q9ERG0 Gm43472-201ENSMUST00000200175 154 ntBASIC0.44□□□□□ -2.34
Lima1Q9ERG0 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC0.44□□□□□ -2.34
Lima1Q9ERG0 AC125311.1-201ENSMUST00000226950 220 ntBASIC0.44□□□□□ -2.34
Lima1Q9ERG0 AC124182.1-201ENSMUST00000227091 321 ntBASIC0.44□□□□□ -2.34
Lima1Q9ERG0 Gm25274-201ENSMUST00000104296 135 ntBASIC0.43□□□□□ -2.34
Lima1Q9ERG0 Gm14574-201ENSMUST00000120644 279 ntBASIC0.43□□□□□ -2.34
Lima1Q9ERG0 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC0.43□□□□□ -2.34
Lima1Q9ERG0 Gm24504-201ENSMUST00000157679 100 ntBASIC0.43□□□□□ -2.34
Lima1Q9ERG0 Gm22914-201ENSMUST00000175195 77 ntBASIC0.43□□□□□ -2.34
Lima1Q9ERG0 Gm43238-201ENSMUST00000196463 359 ntBASIC0.43□□□□□ -2.34
Lima1Q9ERG0 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC0.43□□□□□ -2.34
Lima1Q9ERG0 AC167192.1-201ENSMUST00000225908 139 ntBASIC0.43□□□□□ -2.34
Lima1Q9ERG0 Mir669p-2-201ENSMUST00000103868 87 ntBASIC0.42□□□□□ -2.34
Lima1Q9ERG0 Mir669p-1-201ENSMUST00000103884 87 ntBASIC0.42□□□□□ -2.34
Lima1Q9ERG0 Mir654-201ENSMUST00000104787 84 ntBASIC0.42□□□□□ -2.34
Lima1Q9ERG0 Mir880-201ENSMUST00000104809 78 ntBASIC0.42□□□□□ -2.34
Lima1Q9ERG0 Gm23492-201ENSMUST00000116837 115 ntBASIC0.42□□□□□ -2.34
Lima1Q9ERG0 Gm25450-201ENSMUST00000179144 107 ntBASIC0.42□□□□□ -2.34
Lima1Q9ERG0 Mir6394-201ENSMUST00000184738 99 ntBASIC0.42□□□□□ -2.34
Lima1Q9ERG0 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC0.42□□□□□ -2.34
Lima1Q9ERG0 Gm38050-201ENSMUST00000191904 238 ntBASIC0.42□□□□□ -2.34
Lima1Q9ERG0 Gm36946-201ENSMUST00000192706 435 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms