Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.87□□□□□ -1.95
Upf1Q9EPU0 Gm23090-201ENSMUST00000177331 78 ntBASIC2.87□□□□□ -1.95
Upf1Q9EPU0 Gm44338-201ENSMUST00000198614 110 ntBASIC2.87□□□□□ -1.95
Upf1Q9EPU0 AL627387.1-201ENSMUST00000226063 250 ntBASIC2.87□□□□□ -1.95
Upf1Q9EPU0 AC149294.9-201ENSMUST00000227256 164 ntBASIC2.87□□□□□ -1.95
Upf1Q9EPU0 Gm23347-201ENSMUST00000083823 82 ntBASIC2.87□□□□□ -1.95
Upf1Q9EPU0 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Upf1Q9EPU0 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Upf1Q9EPU0 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.86□□□□□ -1.95
Upf1Q9EPU0 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.86□□□□□ -1.95
Upf1Q9EPU0 Gm24632-201ENSMUST00000122770 323 ntBASIC2.86□□□□□ -1.95
Upf1Q9EPU0 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Upf1Q9EPU0 Gm22850-201ENSMUST00000157714 82 ntBASIC2.86□□□□□ -1.95
Upf1Q9EPU0 Gm25044-201ENSMUST00000158603 104 ntBASIC2.86□□□□□ -1.95
Upf1Q9EPU0 Mir6405-201ENSMUST00000184584 124 ntBASIC2.86□□□□□ -1.95
Upf1Q9EPU0 Gm28912-201ENSMUST00000189001 234 ntBASIC2.86□□□□□ -1.95
Upf1Q9EPU0 Mir488-201ENSMUST00000093595 109 ntBASIC2.86□□□□□ -1.95
Upf1Q9EPU0 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.86□□□□□ -1.95
Upf1Q9EPU0 Gm43379-201ENSMUST00000196253 7726 ntBASIC2.86□□□□□ -1.95
Upf1Q9EPU0 Gm43473-201ENSMUST00000200442 5997 ntBASIC2.85□□□□□ -1.95
Upf1Q9EPU0 Gm23109-201ENSMUST00000116867 126 ntBASIC2.85□□□□□ -1.95
Upf1Q9EPU0 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC2.85□□□□□ -1.95
Upf1Q9EPU0 Gm22699-201ENSMUST00000175376 105 ntBASIC2.85□□□□□ -1.95
Upf1Q9EPU0 Gm23267-201ENSMUST00000178490 132 ntBASIC2.85□□□□□ -1.95
Upf1Q9EPU0 Gm28169-201ENSMUST00000190342 345 ntBASIC2.85□□□□□ -1.95
Upf1Q9EPU0 Gm38364-201ENSMUST00000191814 179 ntBASIC2.85□□□□□ -1.95
Upf1Q9EPU0 Gm37007-201ENSMUST00000194234 319 ntBASIC2.85□□□□□ -1.95
Upf1Q9EPU0 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC2.85□□□□□ -1.95
Upf1Q9EPU0 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Upf1Q9EPU0 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC2.84□□□□□ -1.95
Upf1Q9EPU0 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC2.84□□□□□ -1.95
Upf1Q9EPU0 Mir301b-201ENSMUST00000102333 97 ntBASIC2.84□□□□□ -1.95
Upf1Q9EPU0 Mir293-201ENSMUST00000104841 80 ntBASIC2.84□□□□□ -1.95
Upf1Q9EPU0 Gm24771-201ENSMUST00000158508 137 ntBASIC2.84□□□□□ -1.95
Upf1Q9EPU0 Gm9156-201ENSMUST00000189660 463 ntBASIC2.84□□□□□ -1.95
Upf1Q9EPU0 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC2.84□□□□□ -1.95
Upf1Q9EPU0 Gm44057-201ENSMUST00000204547 96 ntBASIC2.84□□□□□ -1.95
Upf1Q9EPU0 Gm44903-201ENSMUST00000206840 130 ntBASIC2.84□□□□□ -1.95
Upf1Q9EPU0 AC151902.2-201ENSMUST00000226419 301 ntBASIC2.84□□□□□ -1.95
Upf1Q9EPU0 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Upf1Q9EPU0 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Upf1Q9EPU0 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
Upf1Q9EPU0 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC2.84□□□□□ -1.96
Upf1Q9EPU0 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
Upf1Q9EPU0 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
Upf1Q9EPU0 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Upf1Q9EPU0 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.83□□□□□ -1.96
Upf1Q9EPU0 Gm9009-201ENSMUST00000117321 326 ntBASIC2.83□□□□□ -1.96
Upf1Q9EPU0 Gm28409-201ENSMUST00000187064 103 ntBASIC2.83□□□□□ -1.96
Upf1Q9EPU0 Gm21064-202ENSMUST00000190583 278 ntBASIC2.83□□□□□ -1.96
Upf1Q9EPU0 Mir3073b-201ENSMUST00000199383 60 ntBASIC2.83□□□□□ -1.96
Upf1Q9EPU0 AC129202.2-201ENSMUST00000225123 177 ntBASIC2.83□□□□□ -1.96
Upf1Q9EPU0 Gm10813-201ENSMUST00000099936 90 ntBASIC2.83□□□□□ -1.96
Upf1Q9EPU0 Gm37515-201ENSMUST00000193321 3817 ntBASIC2.83□□□□□ -1.96
Upf1Q9EPU0 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Upf1Q9EPU0 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
Upf1Q9EPU0 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.82□□□□□ -1.96
Upf1Q9EPU0 Gm26293-201ENSMUST00000104170 84 ntBASIC2.82□□□□□ -1.96
Upf1Q9EPU0 Gm22673-201ENSMUST00000104415 131 ntBASIC2.82□□□□□ -1.96
Upf1Q9EPU0 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC2.82□□□□□ -1.96
Upf1Q9EPU0 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Upf1Q9EPU0 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC2.82□□□□□ -1.96
Upf1Q9EPU0 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Upf1Q9EPU0 Mir21b-201ENSMUST00000184317 108 ntBASIC2.82□□□□□ -1.96
Upf1Q9EPU0 Gm42623-201ENSMUST00000197225 379 ntBASIC2.82□□□□□ -1.96
Upf1Q9EPU0 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2.82□□□□□ -1.96
Upf1Q9EPU0 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.81□□□□□ -1.96
Upf1Q9EPU0 Gm24049-201ENSMUST00000102409 100 ntBASIC2.81□□□□□ -1.96
Upf1Q9EPU0 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Upf1Q9EPU0 Gm44326-201ENSMUST00000198226 101 ntBASIC2.81□□□□□ -1.96
Upf1Q9EPU0 Mir429-201ENSMUST00000083493 83 ntBASIC2.81□□□□□ -1.96
Upf1Q9EPU0 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC2.8□□□□□ -1.96
Upf1Q9EPU0 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC2.8□□□□□ -1.96
Upf1Q9EPU0 Gm25274-201ENSMUST00000104296 135 ntBASIC2.8□□□□□ -1.96
Upf1Q9EPU0 Gm22330-201ENSMUST00000158068 115 ntBASIC2.8□□□□□ -1.96
Upf1Q9EPU0 Gm42988-201ENSMUST00000198116 225 ntBASIC2.8□□□□□ -1.96
Upf1Q9EPU0 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Upf1Q9EPU0 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Upf1Q9EPU0 Gm25323-201ENSMUST00000122555 103 ntBASIC2.79□□□□□ -1.96
Upf1Q9EPU0 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.79□□□□□ -1.96
Upf1Q9EPU0 Gm26360-201ENSMUST00000158872 103 ntBASIC2.79□□□□□ -1.96
Upf1Q9EPU0 Gm37116-201ENSMUST00000195161 147 ntBASIC2.79□□□□□ -1.96
Upf1Q9EPU0 AL603834.1-201ENSMUST00000198372 121 ntBASIC2.79□□□□□ -1.96
Upf1Q9EPU0 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC2.79□□□□□ -1.96
Upf1Q9EPU0 Gm23722-201ENSMUST00000083002 130 ntBASIC2.79□□□□□ -1.96
Upf1Q9EPU0 Mir200b-201ENSMUST00000083615 70 ntBASIC2.79□□□□□ -1.96
Upf1Q9EPU0 Mir301-201ENSMUST00000083655 86 ntBASIC2.79□□□□□ -1.96
Upf1Q9EPU0 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Upf1Q9EPU0 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Upf1Q9EPU0 Gm25371-201ENSMUST00000158162 101 ntBASIC2.78□□□□□ -1.96
Upf1Q9EPU0 Gm24676-201ENSMUST00000158758 75 ntBASIC2.78□□□□□ -1.96
Upf1Q9EPU0 Gm26291-201ENSMUST00000158889 137 ntBASIC2.78□□□□□ -1.96
Upf1Q9EPU0 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Upf1Q9EPU0 Gm44470-201ENSMUST00000203913 142 ntBASIC2.78□□□□□ -1.96
Upf1Q9EPU0 CT030645.1-201ENSMUST00000224020 231 ntBASIC2.78□□□□□ -1.96
Upf1Q9EPU0 Gm23239-201ENSMUST00000083006 181 ntBASIC2.78□□□□□ -1.96
Upf1Q9EPU0 Gm23772-201ENSMUST00000104433 102 ntBASIC2.77□□□□□ -1.97
Upf1Q9EPU0 Gm26411-201ENSMUST00000157668 107 ntBASIC2.77□□□□□ -1.97
Upf1Q9EPU0 Gm23967-201ENSMUST00000175062 78 ntBASIC2.77□□□□□ -1.97
Upf1Q9EPU0 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms