Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 AC154296.2-201ENSMUST00000214696 545 ntBASIC0.8□□□□□ -2.28
Cdc40Q9DC48 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC0.79□□□□□ -2.28
Cdc40Q9DC48 Gm26135-201ENSMUST00000101993 72 ntBASIC0.79□□□□□ -2.28
Cdc40Q9DC48 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
Cdc40Q9DC48 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC0.79□□□□□ -2.28
Cdc40Q9DC48 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
Cdc40Q9DC48 Gm23779-201ENSMUST00000157938 64 ntBASIC0.79□□□□□ -2.28
Cdc40Q9DC48 Gm23262-201ENSMUST00000158323 168 ntBASIC0.79□□□□□ -2.28
Cdc40Q9DC48 Gm23114-201ENSMUST00000158478 117 ntBASIC0.79□□□□□ -2.28
Cdc40Q9DC48 Mir3471-1-201ENSMUST00000175139 131 ntBASIC0.79□□□□□ -2.28
Cdc40Q9DC48 Gm23921-201ENSMUST00000175258 107 ntBASIC0.79□□□□□ -2.28
Cdc40Q9DC48 Snord50b-201ENSMUST00000178497 72 ntBASIC0.79□□□□□ -2.28
Cdc40Q9DC48 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC0.79□□□□□ -2.28
Cdc40Q9DC48 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC0.79□□□□□ -2.28
Cdc40Q9DC48 Gm44301-201ENSMUST00000200362 143 ntBASIC0.79□□□□□ -2.28
Cdc40Q9DC48 Gm34783-201ENSMUST00000209159 303 ntBASIC0.79□□□□□ -2.28
Cdc40Q9DC48 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC0.79□□□□□ -2.28
Cdc40Q9DC48 Gm23055-201ENSMUST00000082805 94 ntBASIC0.79□□□□□ -2.28
Cdc40Q9DC48 Gm22364-201ENSMUST00000083097 98 ntBASIC0.79□□□□□ -2.28
Cdc40Q9DC48 Gm22294-201ENSMUST00000083308 104 ntBASIC0.79□□□□□ -2.28
Cdc40Q9DC48 Mir200b-201ENSMUST00000083615 70 ntBASIC0.79□□□□□ -2.28
Cdc40Q9DC48 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
Cdc40Q9DC48 Mir767-201ENSMUST00000103256 107 ntBASIC0.78□□□□□ -2.28
Cdc40Q9DC48 Gm15379-201ENSMUST00000121224 648 ntBASIC0.78□□□□□ -2.28
Cdc40Q9DC48 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC0.78□□□□□ -2.28
Cdc40Q9DC48 Gm43884-201ENSMUST00000204251 559 ntBASIC0.78□□□□□ -2.28
Cdc40Q9DC48 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC0.78□□□□□ -2.28
Cdc40Q9DC48 Gm25650-201ENSMUST00000083784 162 ntBASIC0.78□□□□□ -2.28
Cdc40Q9DC48 Gm22365-201ENSMUST00000093750 117 ntBASIC0.78□□□□□ -2.28
Cdc40Q9DC48 Gm22689-201ENSMUST00000102452 110 ntBASIC0.77□□□□□ -2.29
Cdc40Q9DC48 Gm24116-201ENSMUST00000103975 107 ntBASIC0.77□□□□□ -2.29
Cdc40Q9DC48 Gm14536-201ENSMUST00000118324 138 ntBASIC0.77□□□□□ -2.29
Cdc40Q9DC48 Gm15027-201ENSMUST00000120922 138 ntBASIC0.77□□□□□ -2.29
Cdc40Q9DC48 Mir1951-201ENSMUST00000157981 89 ntBASIC0.77□□□□□ -2.29
Cdc40Q9DC48 Gm26194-201ENSMUST00000175036 71 ntBASIC0.77□□□□□ -2.29
Cdc40Q9DC48 Gm43624-201ENSMUST00000197368 180 ntBASIC0.77□□□□□ -2.29
Cdc40Q9DC48 n-R5s94-201ENSMUST00000082573 119 ntBASIC0.77□□□□□ -2.29
Cdc40Q9DC48 Gm22884-201ENSMUST00000083127 140 ntBASIC0.77□□□□□ -2.29
Cdc40Q9DC48 Mir10b-201ENSMUST00000083566 68 ntBASIC0.77□□□□□ -2.29
Cdc40Q9DC48 Gm25627-201ENSMUST00000084003 153 ntBASIC0.77□□□□□ -2.29
Cdc40Q9DC48 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC0.77□□□□□ -2.29
Cdc40Q9DC48 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
Cdc40Q9DC48 Gm14491-201ENSMUST00000121919 199 ntBASIC0.76□□□□□ -2.29
Cdc40Q9DC48 Gm25825-201ENSMUST00000157091 124 ntBASIC0.76□□□□□ -2.29
Cdc40Q9DC48 Gm24401-201ENSMUST00000157868 91 ntBASIC0.76□□□□□ -2.29
Cdc40Q9DC48 Gm23542-201ENSMUST00000158208 96 ntBASIC0.76□□□□□ -2.29
Cdc40Q9DC48 Gm22515-201ENSMUST00000158273 305 ntBASIC0.76□□□□□ -2.29
Cdc40Q9DC48 Gm26914-201ENSMUST00000182262 223 ntBASIC0.76□□□□□ -2.29
Cdc40Q9DC48 Gm26968-201ENSMUST00000182894 481 ntBASIC0.76□□□□□ -2.29
Cdc40Q9DC48 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC0.76□□□□□ -2.29
Cdc40Q9DC48 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC0.76□□□□□ -2.29
Cdc40Q9DC48 Gm38323-201ENSMUST00000192450 210 ntBASIC0.76□□□□□ -2.29
Cdc40Q9DC48 AC164297.5-201ENSMUST00000224365 198 ntBASIC0.76□□□□□ -2.29
Cdc40Q9DC48 Gm25204-201ENSMUST00000082843 106 ntBASIC0.76□□□□□ -2.29
Cdc40Q9DC48 Gm12647-201ENSMUST00000118977 265 ntBASIC0.75□□□□□ -2.29
Cdc40Q9DC48 Gm14298-201ENSMUST00000139032 237 ntBASIC0.75□□□□□ -2.29
Cdc40Q9DC48 Gm16356-201ENSMUST00000143300 169 ntBASIC0.75□□□□□ -2.29
Cdc40Q9DC48 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC0.75□□□□□ -2.29
Cdc40Q9DC48 Gm22085-201ENSMUST00000158344 110 ntBASIC0.75□□□□□ -2.29
Cdc40Q9DC48 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC0.75□□□□□ -2.29
Cdc40Q9DC48 Gm44490-201ENSMUST00000198566 127 ntBASIC0.75□□□□□ -2.29
Cdc40Q9DC48 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC0.75□□□□□ -2.29
Cdc40Q9DC48 AC132437.1-201ENSMUST00000218308 320 ntBASIC0.75□□□□□ -2.29
Cdc40Q9DC48 Gm25937-201ENSMUST00000083912 107 ntBASIC0.75□□□□□ -2.29
Cdc40Q9DC48 AC127302.3-201ENSMUST00000215480 2791 ntBASIC0.75□□□□□ -2.29
Cdc40Q9DC48 Gm23492-201ENSMUST00000116837 115 ntBASIC0.74□□□□□ -2.29
Cdc40Q9DC48 Gm11856-201ENSMUST00000118712 276 ntBASIC0.74□□□□□ -2.29
Cdc40Q9DC48 Gm14307-201ENSMUST00000118930 291 ntBASIC0.74□□□□□ -2.29
Cdc40Q9DC48 Gm24595-201ENSMUST00000122501 110 ntBASIC0.74□□□□□ -2.29
Cdc40Q9DC48 Gm14297-201ENSMUST00000129110 291 ntBASIC0.74□□□□□ -2.29
Cdc40Q9DC48 Gm16362-201ENSMUST00000135189 214 ntBASIC0.74□□□□□ -2.29
Cdc40Q9DC48 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC0.74□□□□□ -2.29
Cdc40Q9DC48 Gm44352-201ENSMUST00000196358 110 ntBASIC0.74□□□□□ -2.29
Cdc40Q9DC48 Gm44419-201ENSMUST00000203338 229 ntBASIC0.74□□□□□ -2.29
Cdc40Q9DC48 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC0.74□□□□□ -2.29
Cdc40Q9DC48 CT033781.2-201ENSMUST00000221113 153 ntBASIC0.74□□□□□ -2.29
Cdc40Q9DC48 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC0.74□□□□□ -2.29
Cdc40Q9DC48 Gm24043-201ENSMUST00000083108 116 ntBASIC0.74□□□□□ -2.29
Cdc40Q9DC48 Gm23039-201ENSMUST00000083870 161 ntBASIC0.74□□□□□ -2.29
Cdc40Q9DC48 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
Cdc40Q9DC48 Gm24164-201ENSMUST00000093663 104 ntBASIC0.74□□□□□ -2.29
Cdc40Q9DC48 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
Cdc40Q9DC48 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
Cdc40Q9DC48 n-R5s63-201ENSMUST00000122756 103 ntBASIC0.73□□□□□ -2.29
Cdc40Q9DC48 Gm26358-201ENSMUST00000158215 97 ntBASIC0.73□□□□□ -2.29
Cdc40Q9DC48 Gm25166-201ENSMUST00000158909 111 ntBASIC0.73□□□□□ -2.29
Cdc40Q9DC48 Gm28862-201ENSMUST00000188246 163 ntBASIC0.73□□□□□ -2.29
Cdc40Q9DC48 Gm6105-201ENSMUST00000200580 624 ntBASIC0.73□□□□□ -2.29
Cdc40Q9DC48 Gm29818-201ENSMUST00000218070 165 ntBASIC0.73□□□□□ -2.29
Cdc40Q9DC48 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC0.73□□□□□ -2.29
Cdc40Q9DC48 Gm22743-201ENSMUST00000083445 133 ntBASIC0.73□□□□□ -2.29
Cdc40Q9DC48 Gm14761-201ENSMUST00000121363 262 ntBASIC0.72□□□□□ -2.29
Cdc40Q9DC48 Gm13560-201ENSMUST00000121865 329 ntBASIC0.72□□□□□ -2.29
Cdc40Q9DC48 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC0.72□□□□□ -2.29
Cdc40Q9DC48 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC0.72□□□□□ -2.29
Cdc40Q9DC48 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC0.72□□□□□ -2.29
Cdc40Q9DC48 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC0.72□□□□□ -2.29
Cdc40Q9DC48 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC0.72□□□□□ -2.29
Cdc40Q9DC48 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC0.72□□□□□ -2.29
Cdc40Q9DC48 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC0.72□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms