Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.44□□□□□ -2.34
Chmp2aQ9DB34 AC104832.1-201ENSMUST00000222938 550 ntBASIC0.44□□□□□ -2.34
Chmp2aQ9DB34 AC110380.1-201ENSMUST00000226987 389 ntBASIC0.44□□□□□ -2.34
Chmp2aQ9DB34 Gm23097-201ENSMUST00000083448 105 ntBASIC0.44□□□□□ -2.34
Chmp2aQ9DB34 Gm14536-201ENSMUST00000118324 138 ntBASIC0.43□□□□□ -2.34
Chmp2aQ9DB34 Gm15027-201ENSMUST00000120922 138 ntBASIC0.43□□□□□ -2.34
Chmp2aQ9DB34 Gm25968-201ENSMUST00000157167 100 ntBASIC0.43□□□□□ -2.34
Chmp2aQ9DB34 Gm23672-201ENSMUST00000157471 107 ntBASIC0.43□□□□□ -2.34
Chmp2aQ9DB34 Gm22914-201ENSMUST00000175195 77 ntBASIC0.43□□□□□ -2.34
Chmp2aQ9DB34 Gm23191-201ENSMUST00000179147 107 ntBASIC0.43□□□□□ -2.34
Chmp2aQ9DB34 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
Chmp2aQ9DB34 Mir376a-201ENSMUST00000197584 68 ntBASIC0.43□□□□□ -2.34
Chmp2aQ9DB34 Mir219b-201ENSMUST00000198317 65 ntBASIC0.43□□□□□ -2.34
Chmp2aQ9DB34 Gm44948-201ENSMUST00000209050 149 ntBASIC0.43□□□□□ -2.34
Chmp2aQ9DB34 Mir34a-201ENSMUST00000083559 102 ntBASIC0.43□□□□□ -2.34
Chmp2aQ9DB34 Gm10730-201ENSMUST00000194097 2723 ntBASIC0.42□□□□□ -2.34
Chmp2aQ9DB34 Gm15379-201ENSMUST00000121224 648 ntBASIC0.42□□□□□ -2.34
Chmp2aQ9DB34 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC0.42□□□□□ -2.34
Chmp2aQ9DB34 Gm24440-201ENSMUST00000157236 63 ntBASIC0.42□□□□□ -2.34
Chmp2aQ9DB34 Gm26022-201ENSMUST00000158663 108 ntBASIC0.42□□□□□ -2.34
Chmp2aQ9DB34 Gm23182-201ENSMUST00000158688 135 ntBASIC0.42□□□□□ -2.34
Chmp2aQ9DB34 Gm24512-201ENSMUST00000174963 65 ntBASIC0.42□□□□□ -2.34
Chmp2aQ9DB34 Gm27410-201ENSMUST00000183851 115 ntBASIC0.42□□□□□ -2.34
Chmp2aQ9DB34 Gm27540-201ENSMUST00000184950 187 ntBASIC0.42□□□□□ -2.34
Chmp2aQ9DB34 Gm27539-201ENSMUST00000184971 224 ntBASIC0.42□□□□□ -2.34
Chmp2aQ9DB34 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC0.42□□□□□ -2.34
Chmp2aQ9DB34 Gm42988-201ENSMUST00000198116 225 ntBASIC0.42□□□□□ -2.34
Chmp2aQ9DB34 Gm44473-201ENSMUST00000204039 152 ntBASIC0.42□□□□□ -2.34
Chmp2aQ9DB34 Gm34783-201ENSMUST00000209159 303 ntBASIC0.42□□□□□ -2.34
Chmp2aQ9DB34 Gm25855-201ENSMUST00000082787 72 ntBASIC0.42□□□□□ -2.34
Chmp2aQ9DB34 Mir496a-201ENSMUST00000093627 79 ntBASIC0.42□□□□□ -2.34
Chmp2aQ9DB34 AC160115.1-201ENSMUST00000224678 1574 ntBASIC0.41□□□□□ -2.34
Chmp2aQ9DB34 Gm26135-201ENSMUST00000101993 72 ntBASIC0.41□□□□□ -2.34
Chmp2aQ9DB34 Gm16032-201ENSMUST00000118534 168 ntBASIC0.41□□□□□ -2.34
Chmp2aQ9DB34 Gm16546-201ENSMUST00000159442 355 ntBASIC0.41□□□□□ -2.34
Chmp2aQ9DB34 Snord50b-201ENSMUST00000178497 72 ntBASIC0.41□□□□□ -2.34
Chmp2aQ9DB34 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC0.41□□□□□ -2.34
Chmp2aQ9DB34 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC0.41□□□□□ -2.34
Chmp2aQ9DB34 AC126554.1-201ENSMUST00000222161 271 ntBASIC0.41□□□□□ -2.34
Chmp2aQ9DB34 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.41□□□□□ -2.34
Chmp2aQ9DB34 Gm23969-201ENSMUST00000083324 74 ntBASIC0.41□□□□□ -2.34
Chmp2aQ9DB34 Mir654-201ENSMUST00000104787 84 ntBASIC0.4□□□□□ -2.35
Chmp2aQ9DB34 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
Chmp2aQ9DB34 Gm22888-201ENSMUST00000158640 77 ntBASIC0.4□□□□□ -2.35
Chmp2aQ9DB34 Gm24342-201ENSMUST00000103907 104 ntBASIC0.39□□□□□ -2.35
Chmp2aQ9DB34 Gm11798-201ENSMUST00000119150 421 ntBASIC0.39□□□□□ -2.35
Chmp2aQ9DB34 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
Chmp2aQ9DB34 Gm24818-201ENSMUST00000175093 161 ntBASIC0.39□□□□□ -2.35
Chmp2aQ9DB34 Gm28256-201ENSMUST00000188953 139 ntBASIC0.39□□□□□ -2.35
Chmp2aQ9DB34 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
Chmp2aQ9DB34 Gm28559-201ENSMUST00000190532 139 ntBASIC0.39□□□□□ -2.35
Chmp2aQ9DB34 Gm44465-201ENSMUST00000199536 114 ntBASIC0.39□□□□□ -2.35
Chmp2aQ9DB34 Gm3867-201ENSMUST00000086108 279 ntBASIC0.39□□□□□ -2.35
Chmp2aQ9DB34 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
Chmp2aQ9DB34 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.38□□□□□ -2.35
Chmp2aQ9DB34 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.38□□□□□ -2.35
Chmp2aQ9DB34 Gm11522-201ENSMUST00000120533 176 ntBASIC0.38□□□□□ -2.35
Chmp2aQ9DB34 Gm13341-201ENSMUST00000120780 672 ntBASIC0.38□□□□□ -2.35
Chmp2aQ9DB34 Gm24393-201ENSMUST00000158135 97 ntBASIC0.38□□□□□ -2.35
Chmp2aQ9DB34 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC0.38□□□□□ -2.35
Chmp2aQ9DB34 Gm20923-201ENSMUST00000190009 319 ntBASIC0.38□□□□□ -2.35
Chmp2aQ9DB34 Gm21088-201ENSMUST00000190875 316 ntBASIC0.38□□□□□ -2.35
Chmp2aQ9DB34 Gm44462-201ENSMUST00000199696 129 ntBASIC0.38□□□□□ -2.35
Chmp2aQ9DB34 Gm43884-201ENSMUST00000204251 559 ntBASIC0.38□□□□□ -2.35
Chmp2aQ9DB34 Gm25204-201ENSMUST00000082843 106 ntBASIC0.38□□□□□ -2.35
Chmp2aQ9DB34 Gm22786-201ENSMUST00000104086 122 ntBASIC0.37□□□□□ -2.35
Chmp2aQ9DB34 Gm12837-201ENSMUST00000120131 373 ntBASIC0.37□□□□□ -2.35
Chmp2aQ9DB34 Gm14491-201ENSMUST00000121919 199 ntBASIC0.37□□□□□ -2.35
Chmp2aQ9DB34 Gm24595-201ENSMUST00000122501 110 ntBASIC0.37□□□□□ -2.35
Chmp2aQ9DB34 Gm22199-201ENSMUST00000122660 126 ntBASIC0.37□□□□□ -2.35
Chmp2aQ9DB34 Gm25393-201ENSMUST00000157336 285 ntBASIC0.37□□□□□ -2.35
Chmp2aQ9DB34 Gm25949-201ENSMUST00000175333 114 ntBASIC0.37□□□□□ -2.35
Chmp2aQ9DB34 Gm37997-201ENSMUST00000193515 267 ntBASIC0.37□□□□□ -2.35
Chmp2aQ9DB34 Gm30155-201ENSMUST00000223458 339 ntBASIC0.37□□□□□ -2.35
Chmp2aQ9DB34 Gm23625-201ENSMUST00000082457 100 ntBASIC0.37□□□□□ -2.35
Chmp2aQ9DB34 Mir767-201ENSMUST00000103256 107 ntBASIC0.36□□□□□ -2.35
Chmp2aQ9DB34 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC0.36□□□□□ -2.35
Chmp2aQ9DB34 Gm14884-201ENSMUST00000120456 196 ntBASIC0.36□□□□□ -2.35
Chmp2aQ9DB34 Gm22883-201ENSMUST00000157376 106 ntBASIC0.36□□□□□ -2.35
Chmp2aQ9DB34 Gm24504-201ENSMUST00000157679 100 ntBASIC0.36□□□□□ -2.35
Chmp2aQ9DB34 Mir1951-201ENSMUST00000157981 89 ntBASIC0.36□□□□□ -2.35
Chmp2aQ9DB34 Gm23113-201ENSMUST00000158477 99 ntBASIC0.36□□□□□ -2.35
Chmp2aQ9DB34 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC0.36□□□□□ -2.35
Chmp2aQ9DB34 Gm25671-201ENSMUST00000178612 105 ntBASIC0.36□□□□□ -2.35
Chmp2aQ9DB34 Gm23307-201ENSMUST00000179167 105 ntBASIC0.36□□□□□ -2.35
Chmp2aQ9DB34 Gm25286-201ENSMUST00000179790 105 ntBASIC0.36□□□□□ -2.35
Chmp2aQ9DB34 Mir7039-201ENSMUST00000183852 85 ntBASIC0.36□□□□□ -2.35
Chmp2aQ9DB34 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC0.36□□□□□ -2.35
Chmp2aQ9DB34 Gm25078-201ENSMUST00000082530 107 ntBASIC0.36□□□□□ -2.35
Chmp2aQ9DB34 Mir880-201ENSMUST00000104809 78 ntBASIC0.35□□□□□ -2.35
Chmp2aQ9DB34 Gm26303-201ENSMUST00000116845 119 ntBASIC0.35□□□□□ -2.35
Chmp2aQ9DB34 Gm15002-201ENSMUST00000118406 452 ntBASIC0.35□□□□□ -2.35
Chmp2aQ9DB34 Gm14761-201ENSMUST00000121363 262 ntBASIC0.35□□□□□ -2.35
Chmp2aQ9DB34 n-R5s73-201ENSMUST00000122508 107 ntBASIC0.35□□□□□ -2.35
Chmp2aQ9DB34 Gm22945-201ENSMUST00000158557 157 ntBASIC0.35□□□□□ -2.35
Chmp2aQ9DB34 Gm22200-201ENSMUST00000158614 67 ntBASIC0.35□□□□□ -2.35
Chmp2aQ9DB34 Gm23059-201ENSMUST00000158978 107 ntBASIC0.35□□□□□ -2.35
Chmp2aQ9DB34 Gm7654-201ENSMUST00000186738 683 ntBASIC0.35□□□□□ -2.35
Chmp2aQ9DB34 Gm44488-201ENSMUST00000199467 119 ntBASIC0.35□□□□□ -2.35
Chmp2aQ9DB34 Gm44828-201ENSMUST00000203745 106 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 76,532 protein–RNA pairs in 130.9 ms