Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Mir1934-201ENSMUST00000158127 83 ntBASIC3.03□□□□□ -1.92
Trim42Q9D2H5 Gm25771-201ENSMUST00000158565 144 ntBASIC3.03□□□□□ -1.92
Trim42Q9D2H5 Gm45456-201ENSMUST00000210841 243 ntBASIC3.03□□□□□ -1.92
Trim42Q9D2H5 Gm22283-201ENSMUST00000082556 161 ntBASIC3.03□□□□□ -1.92
Trim42Q9D2H5 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC3.03□□□□□ -1.92
Trim42Q9D2H5 Gm42801-201ENSMUST00000202562 2865 ntBASIC3.03□□□□□ -1.92
Trim42Q9D2H5 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Trim42Q9D2H5 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
Trim42Q9D2H5 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
Trim42Q9D2H5 Gm43706-201ENSMUST00000198767 2652 ntBASIC3.02□□□□□ -1.93
Trim42Q9D2H5 Gm6954-201ENSMUST00000117416 225 ntBASIC3.02□□□□□ -1.93
Trim42Q9D2H5 Gm13885-201ENSMUST00000117569 187 ntBASIC3.02□□□□□ -1.93
Trim42Q9D2H5 Gm22722-201ENSMUST00000157467 132 ntBASIC3.02□□□□□ -1.93
Trim42Q9D2H5 Gm25887-201ENSMUST00000157777 84 ntBASIC3.02□□□□□ -1.93
Trim42Q9D2H5 Gm25888-201ENSMUST00000157778 302 ntBASIC3.02□□□□□ -1.93
Trim42Q9D2H5 Gm22833-201ENSMUST00000158292 132 ntBASIC3.02□□□□□ -1.93
Trim42Q9D2H5 Gm25769-201ENSMUST00000158569 127 ntBASIC3.02□□□□□ -1.93
Trim42Q9D2H5 Gm24390-201ENSMUST00000179578 62 ntBASIC3.02□□□□□ -1.93
Trim42Q9D2H5 AC166341.8-201ENSMUST00000221267 108 ntBASIC3.02□□□□□ -1.93
Trim42Q9D2H5 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Trim42Q9D2H5 Gm24203-201ENSMUST00000082949 114 ntBASIC3.02□□□□□ -1.93
Trim42Q9D2H5 Gm26126-201ENSMUST00000083188 164 ntBASIC3.02□□□□□ -1.93
Trim42Q9D2H5 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Trim42Q9D2H5 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Trim42Q9D2H5 Mir374b-201ENSMUST00000102314 95 ntBASIC3.01□□□□□ -1.93
Trim42Q9D2H5 n-R5s158-201ENSMUST00000104095 118 ntBASIC3.01□□□□□ -1.93
Trim42Q9D2H5 Gm23530-201ENSMUST00000104564 137 ntBASIC3.01□□□□□ -1.93
Trim42Q9D2H5 Gm23237-201ENSMUST00000104639 92 ntBASIC3.01□□□□□ -1.93
Trim42Q9D2H5 Gm22319-201ENSMUST00000157147 122 ntBASIC3.01□□□□□ -1.93
Trim42Q9D2H5 Gm23381-201ENSMUST00000157676 94 ntBASIC3.01□□□□□ -1.93
Trim42Q9D2H5 Gm23858-201ENSMUST00000158384 106 ntBASIC3.01□□□□□ -1.93
Trim42Q9D2H5 Gm23113-201ENSMUST00000158477 99 ntBASIC3.01□□□□□ -1.93
Trim42Q9D2H5 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC3.01□□□□□ -1.93
Trim42Q9D2H5 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
Trim42Q9D2H5 Gm45104-201ENSMUST00000208748 4350 ntBASIC3□□□□□ -1.93
Trim42Q9D2H5 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Trim42Q9D2H5 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3□□□□□ -1.93
Trim42Q9D2H5 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC3□□□□□ -1.93
Trim42Q9D2H5 Gm24936-201ENSMUST00000122598 247 ntBASIC3□□□□□ -1.93
Trim42Q9D2H5 Gm24008-201ENSMUST00000157733 138 ntBASIC3□□□□□ -1.93
Trim42Q9D2H5 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC3□□□□□ -1.93
Trim42Q9D2H5 Gm23925-201ENSMUST00000082471 132 ntBASIC3□□□□□ -1.93
Trim42Q9D2H5 Snora41-201ENSMUST00000082668 132 ntBASIC3□□□□□ -1.93
Trim42Q9D2H5 Gm24147-201ENSMUST00000082763 144 ntBASIC3□□□□□ -1.93
Trim42Q9D2H5 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Trim42Q9D2H5 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC3□□□□□ -1.93
Trim42Q9D2H5 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC2.99□□□□□ -1.93
Trim42Q9D2H5 Gm22163-201ENSMUST00000158408 135 ntBASIC2.99□□□□□ -1.93
Trim42Q9D2H5 Gm16111-201ENSMUST00000162128 285 ntBASIC2.99□□□□□ -1.93
Trim42Q9D2H5 Gm24573-201ENSMUST00000175499 112 ntBASIC2.99□□□□□ -1.93
Trim42Q9D2H5 Gm26061-201ENSMUST00000175584 108 ntBASIC2.99□□□□□ -1.93
Trim42Q9D2H5 Mir6353-201ENSMUST00000183596 113 ntBASIC2.99□□□□□ -1.93
Trim42Q9D2H5 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC2.99□□□□□ -1.93
Trim42Q9D2H5 Gm23246-201ENSMUST00000083371 67 ntBASIC2.99□□□□□ -1.93
Trim42Q9D2H5 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Trim42Q9D2H5 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
Trim42Q9D2H5 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Trim42Q9D2H5 Gm25878-201ENSMUST00000104327 93 ntBASIC2.98□□□□□ -1.93
Trim42Q9D2H5 Gm15272-201ENSMUST00000120865 233 ntBASIC2.98□□□□□ -1.93
Trim42Q9D2H5 Gm25945-201ENSMUST00000122484 135 ntBASIC2.98□□□□□ -1.93
Trim42Q9D2H5 Gm26100-201ENSMUST00000157245 127 ntBASIC2.98□□□□□ -1.93
Trim42Q9D2H5 Gm25519-201ENSMUST00000158392 127 ntBASIC2.98□□□□□ -1.93
Trim42Q9D2H5 Gm25835-201ENSMUST00000158917 144 ntBASIC2.98□□□□□ -1.93
Trim42Q9D2H5 Gm27446-201ENSMUST00000183963 89 ntBASIC2.98□□□□□ -1.93
Trim42Q9D2H5 Gm28669-201ENSMUST00000188400 100 ntBASIC2.98□□□□□ -1.93
Trim42Q9D2H5 Gm9156-201ENSMUST00000189660 463 ntBASIC2.98□□□□□ -1.93
Trim42Q9D2H5 CT009604.2-201ENSMUST00000225531 377 ntBASIC2.98□□□□□ -1.93
Trim42Q9D2H5 Gm26326-201ENSMUST00000083070 129 ntBASIC2.98□□□□□ -1.93
Trim42Q9D2H5 Mir101b-201ENSMUST00000083622 97 ntBASIC2.98□□□□□ -1.93
Trim42Q9D2H5 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
Trim42Q9D2H5 AC104897.1-201ENSMUST00000222638 3628 ntBASIC2.98□□□□□ -1.93
Trim42Q9D2H5 Gm37143-201ENSMUST00000195180 3259 ntBASIC2.98□□□□□ -1.93
Trim42Q9D2H5 Gm43879-201ENSMUST00000203811 3760 ntBASIC2.97□□□□□ -1.93
Trim42Q9D2H5 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Trim42Q9D2H5 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.97□□□□□ -1.93
Trim42Q9D2H5 Gm23326-201ENSMUST00000157419 105 ntBASIC2.97□□□□□ -1.93
Trim42Q9D2H5 Gm24475-201ENSMUST00000157435 143 ntBASIC2.97□□□□□ -1.93
Trim42Q9D2H5 Gm24736-201ENSMUST00000158862 130 ntBASIC2.97□□□□□ -1.93
Trim42Q9D2H5 Gm27700-201ENSMUST00000185003 81 ntBASIC2.97□□□□□ -1.93
Trim42Q9D2H5 Gm44482-201ENSMUST00000199232 103 ntBASIC2.97□□□□□ -1.93
Trim42Q9D2H5 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC2.97□□□□□ -1.93
Trim42Q9D2H5 Snora7a-201ENSMUST00000082629 140 ntBASIC2.97□□□□□ -1.93
Trim42Q9D2H5 Gm10161-201ENSMUST00000091506 204 ntBASIC2.97□□□□□ -1.93
Trim42Q9D2H5 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
Trim42Q9D2H5 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC2.97□□□□□ -1.93
Trim42Q9D2H5 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Trim42Q9D2H5 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Trim42Q9D2H5 Gm25764-201ENSMUST00000104092 134 ntBASIC2.96□□□□□ -1.94
Trim42Q9D2H5 Gm13862-201ENSMUST00000121220 197 ntBASIC2.96□□□□□ -1.94
Trim42Q9D2H5 Gm12276-201ENSMUST00000121709 301 ntBASIC2.96□□□□□ -1.94
Trim42Q9D2H5 Gm24593-201ENSMUST00000122507 106 ntBASIC2.96□□□□□ -1.94
Trim42Q9D2H5 Gm22380-201ENSMUST00000157479 95 ntBASIC2.96□□□□□ -1.94
Trim42Q9D2H5 Gm22963-201ENSMUST00000157960 91 ntBASIC2.96□□□□□ -1.94
Trim42Q9D2H5 Mir6928-201ENSMUST00000185166 70 ntBASIC2.96□□□□□ -1.94
Trim42Q9D2H5 Gm42960-201ENSMUST00000202160 241 ntBASIC2.96□□□□□ -1.94
Trim42Q9D2H5 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.96□□□□□ -1.94
Trim42Q9D2H5 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.96□□□□□ -1.94
Trim42Q9D2H5 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
Trim42Q9D2H5 Gm26696-201ENSMUST00000181941 2848 ntBASIC2.95□□□□□ -1.94
Trim42Q9D2H5 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 127.8 ms