Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm16328-201ENSMUST00000126985 196 ntBASIC2.07□□□□□ -2.08
Ddx56Q9D0R4 Gm22586-201ENSMUST00000157507 122 ntBASIC2.07□□□□□ -2.08
Ddx56Q9D0R4 Gm26426-201ENSMUST00000177866 123 ntBASIC2.07□□□□□ -2.08
Ddx56Q9D0R4 Gm26060-201ENSMUST00000180094 123 ntBASIC2.07□□□□□ -2.08
Ddx56Q9D0R4 Gm27585-201ENSMUST00000183717 199 ntBASIC2.07□□□□□ -2.08
Ddx56Q9D0R4 Gm36189-201ENSMUST00000204113 523 ntBASIC2.07□□□□□ -2.08
Ddx56Q9D0R4 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC2.07□□□□□ -2.08
Ddx56Q9D0R4 CT485608.2-201ENSMUST00000227210 291 ntBASIC2.07□□□□□ -2.08
Ddx56Q9D0R4 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC2.06□□□□□ -2.08
Ddx56Q9D0R4 Gm25654-201ENSMUST00000158467 88 ntBASIC2.06□□□□□ -2.08
Ddx56Q9D0R4 Gm23113-201ENSMUST00000158477 99 ntBASIC2.06□□□□□ -2.08
Ddx56Q9D0R4 Gm24229-201ENSMUST00000158830 118 ntBASIC2.06□□□□□ -2.08
Ddx56Q9D0R4 Gm25642-201ENSMUST00000175137 66 ntBASIC2.06□□□□□ -2.08
Ddx56Q9D0R4 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Ddx56Q9D0R4 Trbv7-201ENSMUST00000193339 402 ntBASIC2.06□□□□□ -2.08
Ddx56Q9D0R4 Gm43199-201ENSMUST00000200019 307 ntBASIC2.06□□□□□ -2.08
Ddx56Q9D0R4 AC144671.1-201ENSMUST00000215265 99 ntBASIC2.06□□□□□ -2.08
Ddx56Q9D0R4 AC069074.1-201ENSMUST00000220048 381 ntBASIC2.06□□□□□ -2.08
Ddx56Q9D0R4 Gm24375-201ENSMUST00000104397 132 ntBASIC2.05□□□□□ -2.08
Ddx56Q9D0R4 Gm25267-201ENSMUST00000158522 63 ntBASIC2.05□□□□□ -2.08
Ddx56Q9D0R4 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.05□□□□□ -2.08
Ddx56Q9D0R4 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Ddx56Q9D0R4 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.05□□□□□ -2.08
Ddx56Q9D0R4 Gm25697-201ENSMUST00000082902 98 ntBASIC2.05□□□□□ -2.08
Ddx56Q9D0R4 Gm33962-201ENSMUST00000182643 2592 ntBASIC2.05□□□□□ -2.08
Ddx56Q9D0R4 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
Ddx56Q9D0R4 Mir3096-201ENSMUST00000116685 71 ntBASIC2.04□□□□□ -2.08
Ddx56Q9D0R4 Gm15536-201ENSMUST00000121411 114 ntBASIC2.04□□□□□ -2.08
Ddx56Q9D0R4 Gm25783-201ENSMUST00000122525 190 ntBASIC2.04□□□□□ -2.08
Ddx56Q9D0R4 Gm23898-201ENSMUST00000158111 103 ntBASIC2.04□□□□□ -2.08
Ddx56Q9D0R4 Mir7068-201ENSMUST00000183439 74 ntBASIC2.04□□□□□ -2.08
Ddx56Q9D0R4 Mir6901-201ENSMUST00000185062 62 ntBASIC2.04□□□□□ -2.08
Ddx56Q9D0R4 Gm28409-201ENSMUST00000187064 103 ntBASIC2.04□□□□□ -2.08
Ddx56Q9D0R4 Igkv13-76-201ENSMUST00000197621 347 ntBASIC2.04□□□□□ -2.08
Ddx56Q9D0R4 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Ddx56Q9D0R4 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC2.04□□□□□ -2.08
Ddx56Q9D0R4 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Ddx56Q9D0R4 Mir222-201ENSMUST00000083537 79 ntBASIC2.04□□□□□ -2.08
Ddx56Q9D0R4 Mir873a-201ENSMUST00000104863 77 ntBASIC2.03□□□□□ -2.08
Ddx56Q9D0R4 Gm23655-201ENSMUST00000122627 105 ntBASIC2.03□□□□□ -2.08
Ddx56Q9D0R4 Gm23718-201ENSMUST00000157350 307 ntBASIC2.03□□□□□ -2.08
Ddx56Q9D0R4 Gm24478-201ENSMUST00000157439 158 ntBASIC2.03□□□□□ -2.08
Ddx56Q9D0R4 Mir1931-201ENSMUST00000158589 119 ntBASIC2.03□□□□□ -2.08
Ddx56Q9D0R4 Gm16584-201ENSMUST00000159267 189 ntBASIC2.03□□□□□ -2.08
Ddx56Q9D0R4 Gm43602-201ENSMUST00000196772 300 ntBASIC2.03□□□□□ -2.08
Ddx56Q9D0R4 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.03□□□□□ -2.08
Ddx56Q9D0R4 Gm44938-201ENSMUST00000208614 427 ntBASIC2.03□□□□□ -2.08
Ddx56Q9D0R4 Mir146-201ENSMUST00000083667 65 ntBASIC2.03□□□□□ -2.08
Ddx56Q9D0R4 n-R5s183-201ENSMUST00000083939 115 ntBASIC2.02□□□□□ -2.09
Ddx56Q9D0R4 Gm12080-201ENSMUST00000119821 1883 ntBASIC2.02□□□□□ -2.09
Ddx56Q9D0R4 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Ddx56Q9D0R4 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Ddx56Q9D0R4 Gm25068-201ENSMUST00000103895 110 ntBASIC2.01□□□□□ -2.09
Ddx56Q9D0R4 Gm26077-201ENSMUST00000104064 123 ntBASIC2.01□□□□□ -2.09
Ddx56Q9D0R4 Gm22545-201ENSMUST00000104350 132 ntBASIC2.01□□□□□ -2.09
Ddx56Q9D0R4 Gm24640-201ENSMUST00000116949 126 ntBASIC2.01□□□□□ -2.09
Ddx56Q9D0R4 Gm22626-201ENSMUST00000116990 126 ntBASIC2.01□□□□□ -2.09
Ddx56Q9D0R4 n-R5s87-201ENSMUST00000122752 116 ntBASIC2.01□□□□□ -2.09
Ddx56Q9D0R4 Gm22228-201ENSMUST00000157364 101 ntBASIC2.01□□□□□ -2.09
Ddx56Q9D0R4 Gm23901-201ENSMUST00000157570 107 ntBASIC2.01□□□□□ -2.09
Ddx56Q9D0R4 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC2.01□□□□□ -2.09
Ddx56Q9D0R4 Mir5118-201ENSMUST00000175551 67 ntBASIC2.01□□□□□ -2.09
Ddx56Q9D0R4 Gm24761-201ENSMUST00000179589 127 ntBASIC2.01□□□□□ -2.09
Ddx56Q9D0R4 Gm24488-201ENSMUST00000179934 127 ntBASIC2.01□□□□□ -2.09
Ddx56Q9D0R4 Gm25701-201ENSMUST00000179988 127 ntBASIC2.01□□□□□ -2.09
Ddx56Q9D0R4 Gm26431-201ENSMUST00000180199 127 ntBASIC2.01□□□□□ -2.09
Ddx56Q9D0R4 Mir378a-201ENSMUST00000198300 66 ntBASIC2.01□□□□□ -2.09
Ddx56Q9D0R4 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Ddx56Q9D0R4 Gm44240-201ENSMUST00000204015 2654 ntBASIC2□□□□□ -2.09
Ddx56Q9D0R4 Gm37602-201ENSMUST00000195187 3310 ntBASIC2□□□□□ -2.09
Ddx56Q9D0R4 Gm13433-201ENSMUST00000121701 240 ntBASIC2□□□□□ -2.09
Ddx56Q9D0R4 n-R5s188-201ENSMUST00000122646 105 ntBASIC2□□□□□ -2.09
Ddx56Q9D0R4 Gm23542-201ENSMUST00000158208 96 ntBASIC2□□□□□ -2.09
Ddx56Q9D0R4 Gm24770-201ENSMUST00000158505 92 ntBASIC2□□□□□ -2.09
Ddx56Q9D0R4 Mir6995-201ENSMUST00000183658 71 ntBASIC2□□□□□ -2.09
Ddx56Q9D0R4 Mir6950-201ENSMUST00000184438 73 ntBASIC2□□□□□ -2.09
Ddx56Q9D0R4 Gm21064-202ENSMUST00000190583 278 ntBASIC2□□□□□ -2.09
Ddx56Q9D0R4 AC164612.2-202ENSMUST00000216314 253 ntBASIC2□□□□□ -2.09
Ddx56Q9D0R4 Gm22306-201ENSMUST00000082692 107 ntBASIC2□□□□□ -2.09
Ddx56Q9D0R4 Gm22686-201ENSMUST00000082847 100 ntBASIC2□□□□□ -2.09
Ddx56Q9D0R4 Gm25038-201ENSMUST00000082928 130 ntBASIC2□□□□□ -2.09
Ddx56Q9D0R4 Gm43473-201ENSMUST00000200442 5997 ntBASIC2□□□□□ -2.09
Ddx56Q9D0R4 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Ddx56Q9D0R4 Gm14838-201ENSMUST00000118913 248 ntBASIC1.99□□□□□ -2.09
Ddx56Q9D0R4 Gm12771-201ENSMUST00000120246 135 ntBASIC1.99□□□□□ -2.09
Ddx56Q9D0R4 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC1.99□□□□□ -2.09
Ddx56Q9D0R4 Gm23584-201ENSMUST00000157655 129 ntBASIC1.99□□□□□ -2.09
Ddx56Q9D0R4 Gm25223-201ENSMUST00000158200 110 ntBASIC1.99□□□□□ -2.09
Ddx56Q9D0R4 Gm26004-201ENSMUST00000158804 116 ntBASIC1.99□□□□□ -2.09
Ddx56Q9D0R4 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC1.99□□□□□ -2.09
Ddx56Q9D0R4 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC1.99□□□□□ -2.09
Ddx56Q9D0R4 Gm44326-201ENSMUST00000198226 101 ntBASIC1.99□□□□□ -2.09
Ddx56Q9D0R4 Snord82-201ENSMUST00000082889 70 ntBASIC1.99□□□□□ -2.09
Ddx56Q9D0R4 Gm25482-201ENSMUST00000083225 107 ntBASIC1.99□□□□□ -2.09
Ddx56Q9D0R4 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC1.99□□□□□ -2.09
Ddx56Q9D0R4 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Ddx56Q9D0R4 Gm25090-201ENSMUST00000104000 132 ntBASIC1.98□□□□□ -2.09
Ddx56Q9D0R4 Gm22195-201ENSMUST00000116861 108 ntBASIC1.98□□□□□ -2.09
Ddx56Q9D0R4 Gm26279-201ENSMUST00000157095 102 ntBASIC1.98□□□□□ -2.09
Ddx56Q9D0R4 Gm24262-201ENSMUST00000157431 144 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 165.9 ms