Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Gm22630-201ENSMUST00000177781 79 ntBASIC2.6□□□□□ -1.99
Ssu72Q9CY97 Gm23560-201ENSMUST00000177782 79 ntBASIC2.6□□□□□ -1.99
Ssu72Q9CY97 Gm25462-201ENSMUST00000177833 79 ntBASIC2.6□□□□□ -1.99
Ssu72Q9CY97 Gm26059-201ENSMUST00000177865 79 ntBASIC2.6□□□□□ -1.99
Ssu72Q9CY97 Gm22255-201ENSMUST00000177933 79 ntBASIC2.6□□□□□ -1.99
Ssu72Q9CY97 Gm25146-201ENSMUST00000177976 79 ntBASIC2.6□□□□□ -1.99
Ssu72Q9CY97 Gm25523-201ENSMUST00000178044 79 ntBASIC2.6□□□□□ -1.99
Ssu72Q9CY97 Gm24585-201ENSMUST00000178104 79 ntBASIC2.6□□□□□ -1.99
Ssu72Q9CY97 Gm22627-201ENSMUST00000178127 79 ntBASIC2.6□□□□□ -1.99
Ssu72Q9CY97 Gm22912-201ENSMUST00000178242 79 ntBASIC2.6□□□□□ -1.99
Ssu72Q9CY97 Gm24866-201ENSMUST00000178338 79 ntBASIC2.6□□□□□ -1.99
Ssu72Q9CY97 Gm22524-201ENSMUST00000178357 79 ntBASIC2.6□□□□□ -1.99
Ssu72Q9CY97 Gm25710-201ENSMUST00000178367 79 ntBASIC2.6□□□□□ -1.99
Ssu72Q9CY97 Gm23575-201ENSMUST00000178406 79 ntBASIC2.6□□□□□ -1.99
Ssu72Q9CY97 Gm24872-201ENSMUST00000178434 79 ntBASIC2.6□□□□□ -1.99
Ssu72Q9CY97 Gm22449-201ENSMUST00000178924 79 ntBASIC2.6□□□□□ -1.99
Ssu72Q9CY97 Gm24702-201ENSMUST00000178965 79 ntBASIC2.6□□□□□ -1.99
Ssu72Q9CY97 Gm24206-201ENSMUST00000179011 79 ntBASIC2.6□□□□□ -1.99
Ssu72Q9CY97 Gm24528-201ENSMUST00000179164 79 ntBASIC2.6□□□□□ -1.99
Ssu72Q9CY97 Gm22909-201ENSMUST00000179190 79 ntBASIC2.6□□□□□ -1.99
Ssu72Q9CY97 Gm26334-201ENSMUST00000179403 79 ntBASIC2.6□□□□□ -1.99
Ssu72Q9CY97 Gm25463-201ENSMUST00000179405 79 ntBASIC2.6□□□□□ -1.99
Ssu72Q9CY97 Gm25742-201ENSMUST00000179530 79 ntBASIC2.6□□□□□ -1.99
Ssu72Q9CY97 Gm25209-201ENSMUST00000179576 79 ntBASIC2.6□□□□□ -1.99
Ssu72Q9CY97 Gm26392-201ENSMUST00000179661 79 ntBASIC2.6□□□□□ -1.99
Ssu72Q9CY97 Gm25230-201ENSMUST00000179740 79 ntBASIC2.6□□□□□ -1.99
Ssu72Q9CY97 Gm26434-201ENSMUST00000179778 79 ntBASIC2.6□□□□□ -1.99
Ssu72Q9CY97 Gm25741-201ENSMUST00000179825 79 ntBASIC2.6□□□□□ -1.99
Ssu72Q9CY97 Gm24759-201ENSMUST00000179827 79 ntBASIC2.6□□□□□ -1.99
Ssu72Q9CY97 Gm24219-201ENSMUST00000179861 79 ntBASIC2.6□□□□□ -1.99
Ssu72Q9CY97 Gm27878-201ENSMUST00000184000 106 ntBASIC2.6□□□□□ -1.99
Ssu72Q9CY97 Gm43521-201ENSMUST00000197838 255 ntBASIC2.6□□□□□ -1.99
Ssu72Q9CY97 Gm43107-201ENSMUST00000198729 255 ntBASIC2.6□□□□□ -1.99
Ssu72Q9CY97 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.6□□□□□ -1.99
Ssu72Q9CY97 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.6□□□□□ -1.99
Ssu72Q9CY97 AC130477.2-201ENSMUST00000228158 274 ntBASIC2.6□□□□□ -1.99
Ssu72Q9CY97 Snord118-201ENSMUST00000082965 135 ntBASIC2.6□□□□□ -1.99
Ssu72Q9CY97 Mir9-2-201ENSMUST00000083490 72 ntBASIC2.6□□□□□ -1.99
Ssu72Q9CY97 Mir489-201ENSMUST00000093599 107 ntBASIC2.6□□□□□ -1.99
Ssu72Q9CY97 Gm23254-201ENSMUST00000097244 79 ntBASIC2.6□□□□□ -1.99
Ssu72Q9CY97 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
Ssu72Q9CY97 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Ssu72Q9CY97 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.59□□□□□ -1.99
Ssu72Q9CY97 BC022960-201ENSMUST00000119987 1815 ntBASIC2.59□□□□□ -1.99
Ssu72Q9CY97 Gm15281-201ENSMUST00000125181 351 ntBASIC2.59□□□□□ -1.99
Ssu72Q9CY97 Gm23980-201ENSMUST00000157135 158 ntBASIC2.59□□□□□ -1.99
Ssu72Q9CY97 Gm22490-201ENSMUST00000157188 119 ntBASIC2.59□□□□□ -1.99
Ssu72Q9CY97 Gm25476-201ENSMUST00000175125 185 ntBASIC2.59□□□□□ -1.99
Ssu72Q9CY97 Mir7658-201ENSMUST00000184043 57 ntBASIC2.59□□□□□ -1.99
Ssu72Q9CY97 Gm28647-201ENSMUST00000188416 197 ntBASIC2.59□□□□□ -1.99
Ssu72Q9CY97 Mir7215-201ENSMUST00000200383 51 ntBASIC2.59□□□□□ -1.99
Ssu72Q9CY97 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC2.59□□□□□ -1.99
Ssu72Q9CY97 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -1.99
Ssu72Q9CY97 Gm42718-201ENSMUST00000197319 2681 ntBASIC2.59□□□□□ -2
Ssu72Q9CY97 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
Ssu72Q9CY97 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC2.58□□□□□ -2
Ssu72Q9CY97 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Ssu72Q9CY97 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Ssu72Q9CY97 Gm23907-201ENSMUST00000104595 189 ntBASIC2.58□□□□□ -2
Ssu72Q9CY97 Gm14564-201ENSMUST00000122159 294 ntBASIC2.58□□□□□ -2
Ssu72Q9CY97 Gm2830-201ENSMUST00000140330 385 ntBASIC2.58□□□□□ -2
Ssu72Q9CY97 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC2.58□□□□□ -2
Ssu72Q9CY97 Gm24718-201ENSMUST00000157521 136 ntBASIC2.58□□□□□ -2
Ssu72Q9CY97 Gm24291-201ENSMUST00000157633 162 ntBASIC2.58□□□□□ -2
Ssu72Q9CY97 Gm22338-201ENSMUST00000157715 129 ntBASIC2.58□□□□□ -2
Ssu72Q9CY97 Gm25558-201ENSMUST00000158083 106 ntBASIC2.58□□□□□ -2
Ssu72Q9CY97 Gm25748-201ENSMUST00000175487 70 ntBASIC2.58□□□□□ -2
Ssu72Q9CY97 Gm27249-201ENSMUST00000185049 328 ntBASIC2.58□□□□□ -2
Ssu72Q9CY97 Gm45386-201ENSMUST00000210194 218 ntBASIC2.58□□□□□ -2
Ssu72Q9CY97 Gm25357-201ENSMUST00000082745 72 ntBASIC2.58□□□□□ -2
Ssu72Q9CY97 Gm26168-201ENSMUST00000083787 112 ntBASIC2.58□□□□□ -2
Ssu72Q9CY97 Gm25627-201ENSMUST00000084003 153 ntBASIC2.58□□□□□ -2
Ssu72Q9CY97 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC2.58□□□□□ -2
Ssu72Q9CY97 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
Ssu72Q9CY97 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.58□□□□□ -2
Ssu72Q9CY97 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.58□□□□□ -2
Ssu72Q9CY97 Gm22115-201ENSMUST00000103976 133 ntBASIC2.57□□□□□ -2
Ssu72Q9CY97 Gm23923-201ENSMUST00000104108 133 ntBASIC2.57□□□□□ -2
Ssu72Q9CY97 Gm14709-201ENSMUST00000121225 304 ntBASIC2.57□□□□□ -2
Ssu72Q9CY97 Gm11414-201ENSMUST00000121795 263 ntBASIC2.57□□□□□ -2
Ssu72Q9CY97 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC2.57□□□□□ -2
Ssu72Q9CY97 Gm24553-201ENSMUST00000158653 131 ntBASIC2.57□□□□□ -2
Ssu72Q9CY97 Gm42807-201ENSMUST00000200141 329 ntBASIC2.57□□□□□ -2
Ssu72Q9CY97 Gm45791-201ENSMUST00000212908 352 ntBASIC2.57□□□□□ -2
Ssu72Q9CY97 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.56□□□□□ -2
Ssu72Q9CY97 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Ssu72Q9CY97 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
Ssu72Q9CY97 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.56□□□□□ -2
Ssu72Q9CY97 Gm23898-201ENSMUST00000158111 103 ntBASIC2.56□□□□□ -2
Ssu72Q9CY97 Gm25371-201ENSMUST00000158162 101 ntBASIC2.56□□□□□ -2
Ssu72Q9CY97 Gm25367-201ENSMUST00000158846 106 ntBASIC2.56□□□□□ -2
Ssu72Q9CY97 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC2.56□□□□□ -2
Ssu72Q9CY97 Gm44325-201ENSMUST00000196757 77 ntBASIC2.56□□□□□ -2
Ssu72Q9CY97 Gm43626-201ENSMUST00000198575 162 ntBASIC2.56□□□□□ -2
Ssu72Q9CY97 CT009696.1-201ENSMUST00000215745 256 ntBASIC2.56□□□□□ -2
Ssu72Q9CY97 Gm26326-201ENSMUST00000083070 129 ntBASIC2.56□□□□□ -2
Ssu72Q9CY97 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
Ssu72Q9CY97 Gm25764-201ENSMUST00000104092 134 ntBASIC2.55□□□□□ -2
Ssu72Q9CY97 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
Ssu72Q9CY97 Gm25280-201ENSMUST00000157269 101 ntBASIC2.55□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms