Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm24494-201ENSMUST00000083804 81 ntBASIC1.34□□□□□ -2.19
Smc1aQ9CU62 Gm25513-201ENSMUST00000083861 162 ntBASIC1.34□□□□□ -2.19
Smc1aQ9CU62 Mir767-201ENSMUST00000103256 107 ntBASIC1.33□□□□□ -2.2
Smc1aQ9CU62 Gm24440-201ENSMUST00000157236 63 ntBASIC1.33□□□□□ -2.2
Smc1aQ9CU62 Gm27723-201ENSMUST00000157398 63 ntBASIC1.33□□□□□ -2.2
Smc1aQ9CU62 Gm23277-201ENSMUST00000157914 136 ntBASIC1.33□□□□□ -2.2
Smc1aQ9CU62 Gm25768-201ENSMUST00000158570 98 ntBASIC1.33□□□□□ -2.2
Smc1aQ9CU62 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC1.33□□□□□ -2.2
Smc1aQ9CU62 Gm24512-201ENSMUST00000174963 65 ntBASIC1.33□□□□□ -2.2
Smc1aQ9CU62 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
Smc1aQ9CU62 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC1.33□□□□□ -2.2
Smc1aQ9CU62 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC1.33□□□□□ -2.2
Smc1aQ9CU62 Gm42594-201ENSMUST00000199511 246 ntBASIC1.33□□□□□ -2.2
Smc1aQ9CU62 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC1.33□□□□□ -2.2
Smc1aQ9CU62 Gm18188-201ENSMUST00000219386 478 ntBASIC1.33□□□□□ -2.2
Smc1aQ9CU62 AC154328.1-201ENSMUST00000225875 307 ntBASIC1.33□□□□□ -2.2
Smc1aQ9CU62 Mir155-201ENSMUST00000083463 65 ntBASIC1.33□□□□□ -2.2
Smc1aQ9CU62 Gm23345-201ENSMUST00000083817 150 ntBASIC1.33□□□□□ -2.2
Smc1aQ9CU62 Gm26135-201ENSMUST00000101993 72 ntBASIC1.32□□□□□ -2.2
Smc1aQ9CU62 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
Smc1aQ9CU62 Snord71-201ENSMUST00000104361 85 ntBASIC1.32□□□□□ -2.2
Smc1aQ9CU62 Gm24847-201ENSMUST00000158032 108 ntBASIC1.32□□□□□ -2.2
Smc1aQ9CU62 Gm23340-201ENSMUST00000158955 123 ntBASIC1.32□□□□□ -2.2
Smc1aQ9CU62 Snord50b-201ENSMUST00000178497 72 ntBASIC1.32□□□□□ -2.2
Smc1aQ9CU62 Gm22448-201ENSMUST00000179254 107 ntBASIC1.32□□□□□ -2.2
Smc1aQ9CU62 AC154636.2-201ENSMUST00000222538 161 ntBASIC1.32□□□□□ -2.2
Smc1aQ9CU62 AC173482.5-201ENSMUST00000224181 327 ntBASIC1.32□□□□□ -2.2
Smc1aQ9CU62 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.32□□□□□ -2.2
Smc1aQ9CU62 Gm26339-201ENSMUST00000102368 99 ntBASIC1.31□□□□□ -2.2
Smc1aQ9CU62 Gm22785-201ENSMUST00000104087 132 ntBASIC1.31□□□□□ -2.2
Smc1aQ9CU62 Gm23492-201ENSMUST00000116837 115 ntBASIC1.31□□□□□ -2.2
Smc1aQ9CU62 Mir1904-201ENSMUST00000122702 80 ntBASIC1.31□□□□□ -2.2
Smc1aQ9CU62 Gm22216-201ENSMUST00000157557 114 ntBASIC1.31□□□□□ -2.2
Smc1aQ9CU62 Mir6394-201ENSMUST00000184738 99 ntBASIC1.31□□□□□ -2.2
Smc1aQ9CU62 Gm28849-201ENSMUST00000188127 174 ntBASIC1.31□□□□□ -2.2
Smc1aQ9CU62 Gm28330-201ENSMUST00000190353 171 ntBASIC1.31□□□□□ -2.2
Smc1aQ9CU62 AC154552.1-201ENSMUST00000222969 202 ntBASIC1.31□□□□□ -2.2
Smc1aQ9CU62 Mir181a-2-201ENSMUST00000083489 76 ntBASIC1.31□□□□□ -2.2
Smc1aQ9CU62 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
Smc1aQ9CU62 Gm23836-201ENSMUST00000104434 129 ntBASIC1.3□□□□□ -2.2
Smc1aQ9CU62 Mir669i-201ENSMUST00000117007 127 ntBASIC1.3□□□□□ -2.2
Smc1aQ9CU62 Gm15213-201ENSMUST00000122098 216 ntBASIC1.3□□□□□ -2.2
Smc1aQ9CU62 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
Smc1aQ9CU62 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.3□□□□□ -2.2
Smc1aQ9CU62 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC1.3□□□□□ -2.2
Smc1aQ9CU62 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.3□□□□□ -2.2
Smc1aQ9CU62 Gm26447-201ENSMUST00000082448 129 ntBASIC1.3□□□□□ -2.2
Smc1aQ9CU62 Gm24042-201ENSMUST00000083114 103 ntBASIC1.3□□□□□ -2.2
Smc1aQ9CU62 Gm24764-201ENSMUST00000083686 199 ntBASIC1.3□□□□□ -2.2
Smc1aQ9CU62 Gm25409-201ENSMUST00000083764 131 ntBASIC1.3□□□□□ -2.2
Smc1aQ9CU62 Gm14917-201ENSMUST00000118872 2105 ntBASIC1.3□□□□□ -2.2
Smc1aQ9CU62 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC1.29□□□□□ -2.2
Smc1aQ9CU62 Mup-ps22-201ENSMUST00000121611 243 ntBASIC1.29□□□□□ -2.2
Smc1aQ9CU62 Gm23214-201ENSMUST00000122716 157 ntBASIC1.29□□□□□ -2.2
Smc1aQ9CU62 Gm22279-201ENSMUST00000157200 93 ntBASIC1.29□□□□□ -2.2
Smc1aQ9CU62 Gm25884-201ENSMUST00000157782 62 ntBASIC1.29□□□□□ -2.2
Smc1aQ9CU62 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC1.29□□□□□ -2.2
Smc1aQ9CU62 Gm19777-201ENSMUST00000191940 358 ntBASIC1.29□□□□□ -2.2
Smc1aQ9CU62 Gm38060-201ENSMUST00000194822 464 ntBASIC1.29□□□□□ -2.2
Smc1aQ9CU62 Gm44352-201ENSMUST00000196358 110 ntBASIC1.29□□□□□ -2.2
Smc1aQ9CU62 Gm43199-201ENSMUST00000200019 307 ntBASIC1.29□□□□□ -2.2
Smc1aQ9CU62 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC1.29□□□□□ -2.2
Smc1aQ9CU62 Gm25204-201ENSMUST00000082843 106 ntBASIC1.29□□□□□ -2.2
Smc1aQ9CU62 Mir211-201ENSMUST00000083651 106 ntBASIC1.29□□□□□ -2.2
Smc1aQ9CU62 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
Smc1aQ9CU62 Mir669o-201ENSMUST00000103898 96 ntBASIC1.28□□□□□ -2.2
Smc1aQ9CU62 Gm14922-201ENSMUST00000121131 163 ntBASIC1.28□□□□□ -2.2
Smc1aQ9CU62 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
Smc1aQ9CU62 Gm23640-201ENSMUST00000157860 104 ntBASIC1.28□□□□□ -2.2
Smc1aQ9CU62 Gm22929-201ENSMUST00000175517 107 ntBASIC1.28□□□□□ -2.2
Smc1aQ9CU62 Igkv15-102-201ENSMUST00000197885 287 ntBASIC1.28□□□□□ -2.2
Smc1aQ9CU62 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.28□□□□□ -2.2
Smc1aQ9CU62 Gm24038-201ENSMUST00000082872 159 ntBASIC1.28□□□□□ -2.2
Smc1aQ9CU62 Gm26074-201ENSMUST00000104063 129 ntBASIC1.27□□□□□ -2.21
Smc1aQ9CU62 Gm24588-201ENSMUST00000116696 83 ntBASIC1.27□□□□□ -2.21
Smc1aQ9CU62 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
Smc1aQ9CU62 Gm23982-201ENSMUST00000157141 106 ntBASIC1.27□□□□□ -2.21
Smc1aQ9CU62 Gm26022-201ENSMUST00000158663 108 ntBASIC1.27□□□□□ -2.21
Smc1aQ9CU62 Gm42506-201ENSMUST00000202009 150 ntBASIC1.27□□□□□ -2.21
Smc1aQ9CU62 AC098718.1-201ENSMUST00000226166 175 ntBASIC1.27□□□□□ -2.21
Smc1aQ9CU62 Gm23039-201ENSMUST00000083870 161 ntBASIC1.27□□□□□ -2.21
Smc1aQ9CU62 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.26□□□□□ -2.21
Smc1aQ9CU62 Gm37824-201ENSMUST00000193430 3236 ntBASIC1.26□□□□□ -2.21
Smc1aQ9CU62 Gm14919-201ENSMUST00000120839 390 ntBASIC1.26□□□□□ -2.21
Smc1aQ9CU62 Gm14491-201ENSMUST00000121919 199 ntBASIC1.26□□□□□ -2.21
Smc1aQ9CU62 Gm22321-201ENSMUST00000157152 104 ntBASIC1.26□□□□□ -2.21
Smc1aQ9CU62 Gm23536-201ENSMUST00000157541 134 ntBASIC1.26□□□□□ -2.21
Smc1aQ9CU62 Mir1951-201ENSMUST00000157981 89 ntBASIC1.26□□□□□ -2.21
Smc1aQ9CU62 Gm24942-201ENSMUST00000158328 114 ntBASIC1.26□□□□□ -2.21
Smc1aQ9CU62 Gm23419-201ENSMUST00000175523 84 ntBASIC1.26□□□□□ -2.21
Smc1aQ9CU62 AC125020.2-201ENSMUST00000218894 348 ntBASIC1.26□□□□□ -2.21
Smc1aQ9CU62 AC116460.1-201ENSMUST00000219040 313 ntBASIC1.26□□□□□ -2.21
Smc1aQ9CU62 AC098718.2-201ENSMUST00000226822 285 ntBASIC1.26□□□□□ -2.21
Smc1aQ9CU62 Gm22980-201ENSMUST00000082608 70 ntBASIC1.26□□□□□ -2.21
Smc1aQ9CU62 Gm26495-201ENSMUST00000083152 137 ntBASIC1.26□□□□□ -2.21
Smc1aQ9CU62 Gm24261-201ENSMUST00000083744 104 ntBASIC1.26□□□□□ -2.21
Smc1aQ9CU62 Rny1-201ENSMUST00000083767 112 ntBASIC1.26□□□□□ -2.21
Smc1aQ9CU62 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
Smc1aQ9CU62 Gm12080-201ENSMUST00000119821 1883 ntBASIC1.26□□□□□ -2.21
Smc1aQ9CU62 Gm26479-201ENSMUST00000122620 106 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 139 ms