| Hint3 | Q9CPS6 | Gm15404-201 | ENSMUST00000141811 | 364 nt | TSL 2 BASIC | 1.36 | □□□□□ -2.19 | | |
| Hint3 | Q9CPS6 | Gm23101-201 | ENSMUST00000157550 | 137 nt | BASIC | 1.36 | □□□□□ -2.19 | | |
| Hint3 | Q9CPS6 | Gm22963-201 | ENSMUST00000157960 | 91 nt | BASIC | 1.36 | □□□□□ -2.19 | | |
| Hint3 | Q9CPS6 | Gm22450-201 | ENSMUST00000179641 | 107 nt | BASIC | 1.36 | □□□□□ -2.19 | | |
| Hint3 | Q9CPS6 | Gm25473-201 | ENSMUST00000180191 | 107 nt | BASIC | 1.36 | □□□□□ -2.19 | | |
| Hint3 | Q9CPS6 | Mir6540-201 | ENSMUST00000184886 | 108 nt | BASIC | 1.36 | □□□□□ -2.19 | | |
| Hint3 | Q9CPS6 | Sprr2h-202 | ENSMUST00000191886 | 297 nt | TSL 1 (best) BASIC | 1.36 | □□□□□ -2.19 | | |
| Hint3 | Q9CPS6 | Gm45027-201 | ENSMUST00000207081 | 78 nt | TSL 3 BASIC | 1.36 | □□□□□ -2.19 | | |
| Hint3 | Q9CPS6 | AC125020.2-201 | ENSMUST00000218894 | 348 nt | BASIC | 1.36 | □□□□□ -2.19 | | |
| Hint3 | Q9CPS6 | Gm6377-201 | ENSMUST00000060013 | 2793 nt | APPRIS P1 TSL 1 (best) BASIC | 1.36 | □□□□□ -2.19 | | |
| Hint3 | Q9CPS6 | Gm24856-201 | ENSMUST00000082809 | 107 nt | BASIC | 1.36 | □□□□□ -2.19 | | |
| Hint3 | Q9CPS6 | Gm25038-201 | ENSMUST00000082928 | 130 nt | BASIC | 1.36 | □□□□□ -2.19 | | |
| Hint3 | Q9CPS6 | Gm26071-201 | ENSMUST00000083261 | 107 nt | BASIC | 1.36 | □□□□□ -2.19 | | |
| Hint3 | Q9CPS6 | Gm24521-201 | ENSMUST00000083958 | 107 nt | BASIC | 1.36 | □□□□□ -2.19 | | |
| Hint3 | Q9CPS6 | Mir544-201 | ENSMUST00000103813 | 78 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| Hint3 | Q9CPS6 | Mir875-201 | ENSMUST00000104698 | 78 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| Hint3 | Q9CPS6 | Rhox11-ps3-201 | ENSMUST00000121166 | 233 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| Hint3 | Q9CPS6 | Gm26049-201 | ENSMUST00000157313 | 108 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| Hint3 | Q9CPS6 | Gm22097-201 | ENSMUST00000157929 | 278 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| Hint3 | Q9CPS6 | Gm23194-201 | ENSMUST00000158813 | 105 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| Hint3 | Q9CPS6 | AC147560.1-201 | ENSMUST00000197528 | 107 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| Hint3 | Q9CPS6 | AC159896.1-201 | ENSMUST00000215264 | 215 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| Hint3 | Q9CPS6 | Gm12080-201 | ENSMUST00000119821 | 1883 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| Hint3 | Q9CPS6 | Arhgap5-201 | ENSMUST00000110725 | 5197 nt | APPRIS P1 TSL 1 (best) BASIC | 1.34 | □□□□□ -2.19 | | |
| Hint3 | Q9CPS6 | Zfp981-203 | ENSMUST00000179175 | 2953 nt | APPRIS P1 TSL 2 BASIC | 1.34 | □□□□□ -2.19 | | |
| Hint3 | Q9CPS6 | Gm42862-201 | ENSMUST00000197494 | 2621 nt | BASIC | 1.34 | □□□□□ -2.19 | | |
| Hint3 | Q9CPS6 | Gm22545-201 | ENSMUST00000104350 | 132 nt | BASIC | 1.34 | □□□□□ -2.19 | | |
| Hint3 | Q9CPS6 | Gm16032-201 | ENSMUST00000118534 | 168 nt | BASIC | 1.34 | □□□□□ -2.19 | | |
| Hint3 | Q9CPS6 | n-R5s188-201 | ENSMUST00000122646 | 105 nt | BASIC | 1.34 | □□□□□ -2.19 | | |
| Hint3 | Q9CPS6 | Gm26287-201 | ENSMUST00000158887 | 81 nt | BASIC | 1.34 | □□□□□ -2.19 | | |
| Hint3 | Q9CPS6 | Gm29603-201 | ENSMUST00000186792 | 334 nt | BASIC | 1.34 | □□□□□ -2.19 | | |
| Hint3 | Q9CPS6 | Mir3970-201 | ENSMUST00000199287 | 90 nt | BASIC | 1.34 | □□□□□ -2.19 | | |
| Hint3 | Q9CPS6 | Gm16976-205 | ENSMUST00000227324 | 226 nt | BASIC | 1.34 | □□□□□ -2.19 | | |
| Hint3 | Q9CPS6 | Gm22421-201 | ENSMUST00000083058 | 107 nt | BASIC | 1.34 | □□□□□ -2.19 | | |
| Hint3 | Q9CPS6 | Gm18795-202 | ENSMUST00000223373 | 2920 nt | BASIC | 1.34 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Gm16225-201 | ENSMUST00000146152 | 276 nt | TSL 5 BASIC | 1.33 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Gm24909-201 | ENSMUST00000157290 | 280 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Gm23221-201 | ENSMUST00000158118 | 93 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Gm26004-201 | ENSMUST00000158804 | 116 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Olfr1366-201 | ENSMUST00000168629 | 1054 nt | APPRIS ALT2 BASIC | 1.33 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Gm25397-201 | ENSMUST00000176951 | 92 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Gm28921-201 | ENSMUST00000190219 | 378 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Gm43563-201 | ENSMUST00000196761 | 198 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Olfr1366-204 | ENSMUST00000218154 | 1054 nt | APPRIS P2 BASIC | 1.33 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Gm22306-201 | ENSMUST00000082692 | 107 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Traj37-201 | ENSMUST00000103705 | 60 nt | APPRIS P1 BASIC | 1.32 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Gm23705-201 | ENSMUST00000104370 | 130 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Gm14792-201 | ENSMUST00000119725 | 258 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Gm25664-201 | ENSMUST00000157697 | 107 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Gm23665-201 | ENSMUST00000158054 | 62 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Gm23714-201 | ENSMUST00000179259 | 105 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Gm25024-201 | ENSMUST00000179667 | 104 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Ranbp2-ps6-201 | ENSMUST00000183722 | 381 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Gm29490-201 | ENSMUST00000190923 | 342 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Gm44977-201 | ENSMUST00000205283 | 420 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | A730009L09Rik-202 | ENSMUST00000210306 | 201 nt | APPRIS ALT2 TSL 5 BASIC | 1.32 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | AC125374.2-201 | ENSMUST00000214278 | 162 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Snora19-201 | ENSMUST00000082962 | 132 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Gm23658-201 | ENSMUST00000083233 | 132 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Gm23451-201 | ENSMUST00000083328 | 122 nt | BASIC | 1.32 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Olfr141-201 | ENSMUST00000216117 | 2935 nt | APPRIS P1 TSL 5 BASIC | 1.32 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Gm42718-201 | ENSMUST00000197319 | 2681 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Gm22784-201 | ENSMUST00000104088 | 132 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Gm23336-201 | ENSMUST00000117023 | 123 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Gm11388-201 | ENSMUST00000120908 | 159 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Snord13-201 | ENSMUST00000157627 | 104 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Gm23277-201 | ENSMUST00000157914 | 136 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Gm22164-201 | ENSMUST00000158413 | 106 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Gm34139-201 | ENSMUST00000196166 | 294 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | CT025689.3-201 | ENSMUST00000223817 | 301 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | AC124182.1-201 | ENSMUST00000227091 | 321 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Gm25627-201 | ENSMUST00000084003 | 153 nt | BASIC | 1.31 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Gm24423-201 | ENSMUST00000101982 | 106 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Gm24392-201 | ENSMUST00000158136 | 103 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Gm24667-201 | ENSMUST00000158938 | 103 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Gm23967-201 | ENSMUST00000175062 | 78 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Mir3061-201 | ENSMUST00000175129 | 91 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Mir3471-1-201 | ENSMUST00000175139 | 131 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Gm23571-201 | ENSMUST00000180073 | 127 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Gm43602-201 | ENSMUST00000196772 | 300 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Gm42855-201 | ENSMUST00000197388 | 253 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | AL928567.1-201 | ENSMUST00000197891 | 138 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | AC154994.1-201 | ENSMUST00000217395 | 302 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Gm25697-201 | ENSMUST00000082902 | 98 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Gm21876-201 | ENSMUST00000096511 | 282 nt | APPRIS P1 TSL 5 BASIC | 1.3 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Gm8935-202 | ENSMUST00000105727 | 1959 nt | BASIC | 1.3 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Olfr1154-202 | ENSMUST00000215017 | 2917 nt | APPRIS P1 TSL 5 BASIC | 1.29 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Gm25759-201 | ENSMUST00000103988 | 129 nt | BASIC | 1.29 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Gm22149-201 | ENSMUST00000104442 | 136 nt | BASIC | 1.29 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Gm14536-201 | ENSMUST00000118324 | 138 nt | BASIC | 1.29 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Gm12797-201 | ENSMUST00000118645 | 273 nt | BASIC | 1.29 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Gm15027-201 | ENSMUST00000120922 | 138 nt | BASIC | 1.29 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Gm23898-201 | ENSMUST00000158111 | 103 nt | BASIC | 1.29 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Gm26038-201 | ENSMUST00000158151 | 106 nt | BASIC | 1.29 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Mir5104-201 | ENSMUST00000175319 | 94 nt | BASIC | 1.29 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Gm22862-201 | ENSMUST00000178593 | 121 nt | BASIC | 1.29 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Selenok-ps4-201 | ENSMUST00000178835 | 277 nt | BASIC | 1.29 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Gm27326-201 | ENSMUST00000183504 | 95 nt | BASIC | 1.29 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Gm9251-201 | ENSMUST00000197202 | 628 nt | BASIC | 1.29 | □□□□□ -2.2 | | |
| Hint3 | Q9CPS6 | Vmn1r-ps6-202 | ENSMUST00000202526 | 135 nt | TSL 5 BASIC | 1.29 | □□□□□ -2.2 | | |