Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Gm24847-201ENSMUST00000158032 108 ntBASIC1.01□□□□□ -2.25
Sf3b1Q99NB9 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.01□□□□□ -2.25
Sf3b1Q99NB9 Gm22114-201ENSMUST00000177756 107 ntBASIC1.01□□□□□ -2.25
Sf3b1Q99NB9 Mir6985-201ENSMUST00000184641 61 ntBASIC1.01□□□□□ -2.25
Sf3b1Q99NB9 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC1.01□□□□□ -2.25
Sf3b1Q99NB9 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC1.01□□□□□ -2.25
Sf3b1Q99NB9 Gm30155-201ENSMUST00000223458 339 ntBASIC1.01□□□□□ -2.25
Sf3b1Q99NB9 AC098718.2-201ENSMUST00000226822 285 ntBASIC1.01□□□□□ -2.25
Sf3b1Q99NB9 Gm23299-201ENSMUST00000082708 79 ntBASIC1.01□□□□□ -2.25
Sf3b1Q99NB9 Gm25204-201ENSMUST00000082843 106 ntBASIC1.01□□□□□ -2.25
Sf3b1Q99NB9 Gm22884-201ENSMUST00000083127 140 ntBASIC1.01□□□□□ -2.25
Sf3b1Q99NB9 Mir181a-1-201ENSMUST00000083631 87 ntBASIC1.01□□□□□ -2.25
Sf3b1Q99NB9 Gm16032-201ENSMUST00000118534 168 ntBASIC1□□□□□ -2.25
Sf3b1Q99NB9 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC1□□□□□ -2.25
Sf3b1Q99NB9 Gm24221-201ENSMUST00000158833 313 ntBASIC1□□□□□ -2.25
Sf3b1Q99NB9 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC1□□□□□ -2.25
Sf3b1Q99NB9 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC1□□□□□ -2.25
Sf3b1Q99NB9 Gm25750-201ENSMUST00000175483 112 ntBASIC1□□□□□ -2.25
Sf3b1Q99NB9 Gm23186-201ENSMUST00000180078 107 ntBASIC1□□□□□ -2.25
Sf3b1Q99NB9 Gm27420-201ENSMUST00000183823 79 ntBASIC1□□□□□ -2.25
Sf3b1Q99NB9 Gm38109-201ENSMUST00000195386 181 ntBASIC1□□□□□ -2.25
Sf3b1Q99NB9 Gm44458-201ENSMUST00000196594 143 ntBASIC1□□□□□ -2.25
Sf3b1Q99NB9 Mir376a-201ENSMUST00000197584 68 ntBASIC1□□□□□ -2.25
Sf3b1Q99NB9 Mir3535-201ENSMUST00000197651 147 ntBASIC1□□□□□ -2.25
Sf3b1Q99NB9 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC1□□□□□ -2.25
Sf3b1Q99NB9 Gm43884-201ENSMUST00000204251 559 ntBASIC1□□□□□ -2.25
Sf3b1Q99NB9 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC1□□□□□ -2.25
Sf3b1Q99NB9 AC116589.4-201ENSMUST00000222390 216 ntBASIC1□□□□□ -2.25
Sf3b1Q99NB9 Gm23492-201ENSMUST00000116837 115 ntBASIC0.99□□□□□ -2.25
Sf3b1Q99NB9 Gm11794-201ENSMUST00000119446 237 ntBASIC0.99□□□□□ -2.25
Sf3b1Q99NB9 Gm26022-201ENSMUST00000158663 108 ntBASIC0.99□□□□□ -2.25
Sf3b1Q99NB9 Gm29022-201ENSMUST00000190702 225 ntBASIC0.99□□□□□ -2.25
Sf3b1Q99NB9 Gm28211-201ENSMUST00000190920 315 ntBASIC0.99□□□□□ -2.25
Sf3b1Q99NB9 Gm37763-201ENSMUST00000193445 120 ntBASIC0.99□□□□□ -2.25
Sf3b1Q99NB9 Mir465d-201ENSMUST00000196314 58 ntBASIC0.99□□□□□ -2.25
Sf3b1Q99NB9 Gm25697-201ENSMUST00000082902 98 ntBASIC0.99□□□□□ -2.25
Sf3b1Q99NB9 Gm25578-201ENSMUST00000083406 104 ntBASIC0.99□□□□□ -2.25
Sf3b1Q99NB9 Gm26107-201ENSMUST00000083972 107 ntBASIC0.99□□□□□ -2.25
Sf3b1Q99NB9 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
Sf3b1Q99NB9 Gm25825-201ENSMUST00000157091 124 ntBASIC0.98□□□□□ -2.25
Sf3b1Q99NB9 Mir1951-201ENSMUST00000157981 89 ntBASIC0.98□□□□□ -2.25
Sf3b1Q99NB9 Gm23542-201ENSMUST00000158208 96 ntBASIC0.98□□□□□ -2.25
Sf3b1Q99NB9 Gm27640-201ENSMUST00000184580 147 ntBASIC0.98□□□□□ -2.25
Sf3b1Q99NB9 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC0.98□□□□□ -2.25
Sf3b1Q99NB9 Gm44419-201ENSMUST00000203338 229 ntBASIC0.98□□□□□ -2.25
Sf3b1Q99NB9 AC145736.2-201ENSMUST00000216305 365 ntBASIC0.98□□□□□ -2.25
Sf3b1Q99NB9 Gm24523-201ENSMUST00000083965 132 ntBASIC0.98□□□□□ -2.25
Sf3b1Q99NB9 Gm28330-201ENSMUST00000190353 171 ntBASIC0.97□□□□□ -2.25
Sf3b1Q99NB9 Gm44352-201ENSMUST00000196358 110 ntBASIC0.97□□□□□ -2.25
Sf3b1Q99NB9 Gm44063-201ENSMUST00000203307 376 ntBASIC0.97□□□□□ -2.25
Sf3b1Q99NB9 AC164117.2-201ENSMUST00000222090 327 ntBASIC0.97□□□□□ -2.25
Sf3b1Q99NB9 Gm22248-201ENSMUST00000082482 150 ntBASIC0.97□□□□□ -2.25
Sf3b1Q99NB9 Gm24042-201ENSMUST00000083114 103 ntBASIC0.97□□□□□ -2.25
Sf3b1Q99NB9 Gm25683-201ENSMUST00000083940 131 ntBASIC0.97□□□□□ -2.25
Sf3b1Q99NB9 Gm25627-201ENSMUST00000084003 153 ntBASIC0.97□□□□□ -2.25
Sf3b1Q99NB9 Mir490-201ENSMUST00000093567 84 ntBASIC0.97□□□□□ -2.25
Sf3b1Q99NB9 Gm23060-201ENSMUST00000102345 109 ntBASIC0.96□□□□□ -2.26
Sf3b1Q99NB9 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
Sf3b1Q99NB9 Mir466f-3-201ENSMUST00000104788 94 ntBASIC0.96□□□□□ -2.26
Sf3b1Q99NB9 Gm22032-201ENSMUST00000116946 116 ntBASIC0.96□□□□□ -2.26
Sf3b1Q99NB9 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
Sf3b1Q99NB9 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC0.96□□□□□ -2.26
Sf3b1Q99NB9 Gm28862-201ENSMUST00000188246 163 ntBASIC0.96□□□□□ -2.26
Sf3b1Q99NB9 Gm9795-201ENSMUST00000062156 693 ntBASIC0.96□□□□□ -2.26
Sf3b1Q99NB9 Rny1-201ENSMUST00000083767 112 ntBASIC0.96□□□□□ -2.26
Sf3b1Q99NB9 Gm26255-201ENSMUST00000122492 103 ntBASIC0.95□□□□□ -2.26
Sf3b1Q99NB9 Gm27545-201ENSMUST00000184755 202 ntBASIC0.95□□□□□ -2.26
Sf3b1Q99NB9 Mir6540-201ENSMUST00000184886 108 ntBASIC0.95□□□□□ -2.26
Sf3b1Q99NB9 Gm37313-201ENSMUST00000191673 290 ntBASIC0.95□□□□□ -2.26
Sf3b1Q99NB9 Gm25650-201ENSMUST00000083784 162 ntBASIC0.95□□□□□ -2.26
Sf3b1Q99NB9 Gm24342-201ENSMUST00000103907 104 ntBASIC0.94□□□□□ -2.26
Sf3b1Q99NB9 Gm22814-201ENSMUST00000157452 104 ntBASIC0.94□□□□□ -2.26
Sf3b1Q99NB9 Gm28849-201ENSMUST00000188127 174 ntBASIC0.94□□□□□ -2.26
Sf3b1Q99NB9 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC0.94□□□□□ -2.26
Sf3b1Q99NB9 Gm44358-201ENSMUST00000196301 98 ntBASIC0.94□□□□□ -2.26
Sf3b1Q99NB9 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC0.94□□□□□ -2.26
Sf3b1Q99NB9 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC0.94□□□□□ -2.26
Sf3b1Q99NB9 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC0.94□□□□□ -2.26
Sf3b1Q99NB9 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC0.94□□□□□ -2.26
Sf3b1Q99NB9 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC0.94□□□□□ -2.26
Sf3b1Q99NB9 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC0.94□□□□□ -2.26
Sf3b1Q99NB9 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC0.94□□□□□ -2.26
Sf3b1Q99NB9 Gm10264-201ENSMUST00000220589 429 ntBASIC0.94□□□□□ -2.26
Sf3b1Q99NB9 Gm25851-201ENSMUST00000082794 107 ntBASIC0.94□□□□□ -2.26
Sf3b1Q99NB9 Mir34a-201ENSMUST00000083559 102 ntBASIC0.94□□□□□ -2.26
Sf3b1Q99NB9 Mir10b-201ENSMUST00000083566 68 ntBASIC0.94□□□□□ -2.26
Sf3b1Q99NB9 Mir344-201ENSMUST00000083634 95 ntBASIC0.94□□□□□ -2.26
Sf3b1Q99NB9 Gm43877-201ENSMUST00000205029 2238 ntBASIC0.94□□□□□ -2.26
Sf3b1Q99NB9 Mir466f-2-201ENSMUST00000104805 94 ntBASIC0.93□□□□□ -2.26
Sf3b1Q99NB9 Gm15002-201ENSMUST00000118406 452 ntBASIC0.93□□□□□ -2.26
Sf3b1Q99NB9 n-R5s63-201ENSMUST00000122756 103 ntBASIC0.93□□□□□ -2.26
Sf3b1Q99NB9 Gm24629-201ENSMUST00000122762 89 ntBASIC0.93□□□□□ -2.26
Sf3b1Q99NB9 Gm23898-201ENSMUST00000158111 103 ntBASIC0.93□□□□□ -2.26
Sf3b1Q99NB9 Gm25011-201ENSMUST00000158398 126 ntBASIC0.93□□□□□ -2.26
Sf3b1Q99NB9 Gm23114-201ENSMUST00000158478 117 ntBASIC0.93□□□□□ -2.26
Sf3b1Q99NB9 Gm22802-201ENSMUST00000175621 89 ntBASIC0.93□□□□□ -2.26
Sf3b1Q99NB9 Gm27587-201ENSMUST00000185116 163 ntBASIC0.93□□□□□ -2.26
Sf3b1Q99NB9 Gm28921-201ENSMUST00000190219 378 ntBASIC0.93□□□□□ -2.26
Sf3b1Q99NB9 Gm22743-201ENSMUST00000083445 133 ntBASIC0.93□□□□□ -2.26
Sf3b1Q99NB9 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
Retrieved 100 of 76,532 protein–RNA pairs in 101 ms