Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Gm24877-201ENSMUST00000158779 116 ntBASIC2.55□□□□□ -2
Lims1Q99JW4 Gm27672-201ENSMUST00000183751 204 ntBASIC2.55□□□□□ -2
Lims1Q99JW4 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC2.55□□□□□ -2
Lims1Q99JW4 Gm45288-201ENSMUST00000210236 151 ntBASIC2.55□□□□□ -2
Lims1Q99JW4 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Lims1Q99JW4 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.55□□□□□ -2
Lims1Q99JW4 Mir155-201ENSMUST00000083463 65 ntBASIC2.55□□□□□ -2
Lims1Q99JW4 Mir369-201ENSMUST00000083627 79 ntBASIC2.55□□□□□ -2
Lims1Q99JW4 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2.54□□□□□ -2
Lims1Q99JW4 Gm24126-201ENSMUST00000104111 106 ntBASIC2.54□□□□□ -2
Lims1Q99JW4 Gm26473-201ENSMUST00000116763 127 ntBASIC2.54□□□□□ -2
Lims1Q99JW4 Mir1195-201ENSMUST00000116818 98 ntBASIC2.54□□□□□ -2
Lims1Q99JW4 Gm14567-201ENSMUST00000117155 174 ntBASIC2.54□□□□□ -2
Lims1Q99JW4 DQ267100-201ENSMUST00000122600 72 ntBASIC2.54□□□□□ -2
Lims1Q99JW4 Gm24911-201ENSMUST00000157292 136 ntBASIC2.54□□□□□ -2
Lims1Q99JW4 Gm22558-201ENSMUST00000157326 95 ntBASIC2.54□□□□□ -2
Lims1Q99JW4 Snord11-201ENSMUST00000158468 84 ntBASIC2.54□□□□□ -2
Lims1Q99JW4 Gm6060-201ENSMUST00000188671 251 ntBASIC2.54□□□□□ -2
Lims1Q99JW4 Gm44057-201ENSMUST00000204547 96 ntBASIC2.54□□□□□ -2
Lims1Q99JW4 Gm44903-201ENSMUST00000206840 130 ntBASIC2.54□□□□□ -2
Lims1Q99JW4 Gm44666-201ENSMUST00000208544 391 ntBASIC2.54□□□□□ -2
Lims1Q99JW4 CT033781.2-201ENSMUST00000221113 153 ntBASIC2.54□□□□□ -2
Lims1Q99JW4 Gm25124-201ENSMUST00000083345 164 ntBASIC2.54□□□□□ -2
Lims1Q99JW4 AC161250.2-201ENSMUST00000215114 3107 ntBASIC2.54□□□□□ -2
Lims1Q99JW4 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
Lims1Q99JW4 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
Lims1Q99JW4 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.53□□□□□ -2
Lims1Q99JW4 Gm24650-201ENSMUST00000157105 103 ntBASIC2.53□□□□□ -2
Lims1Q99JW4 Gm23588-201ENSMUST00000157659 99 ntBASIC2.53□□□□□ -2
Lims1Q99JW4 Gm27792-201ENSMUST00000184031 115 ntBASIC2.53□□□□□ -2
Lims1Q99JW4 AC160962.3-201ENSMUST00000225914 112 ntBASIC2.53□□□□□ -2
Lims1Q99JW4 AC115291.1-201ENSMUST00000226803 258 ntBASIC2.53□□□□□ -2
Lims1Q99JW4 Gm25130-201ENSMUST00000082650 156 ntBASIC2.53□□□□□ -2
Lims1Q99JW4 Mir19b-2-201ENSMUST00000083539 84 ntBASIC2.53□□□□□ -2
Lims1Q99JW4 Mir489-201ENSMUST00000093599 107 ntBASIC2.53□□□□□ -2
Lims1Q99JW4 Gm44177-201ENSMUST00000204338 2667 ntBASIC2.52□□□□□ -2.01
Lims1Q99JW4 Gm23911-201ENSMUST00000104596 134 ntBASIC2.52□□□□□ -2.01
Lims1Q99JW4 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.52□□□□□ -2.01
Lims1Q99JW4 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Lims1Q99JW4 Gm26406-201ENSMUST00000158503 124 ntBASIC2.52□□□□□ -2.01
Lims1Q99JW4 Gm25488-201ENSMUST00000158728 118 ntBASIC2.52□□□□□ -2.01
Lims1Q99JW4 Gm43324-201ENSMUST00000197482 289 ntBASIC2.52□□□□□ -2.01
Lims1Q99JW4 Gm44966-201ENSMUST00000208096 157 ntBASIC2.52□□□□□ -2.01
Lims1Q99JW4 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.52□□□□□ -2.01
Lims1Q99JW4 n-R5s183-201ENSMUST00000083939 115 ntBASIC2.52□□□□□ -2.01
Lims1Q99JW4 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Lims1Q99JW4 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC2.51□□□□□ -2.01
Lims1Q99JW4 Gm23567-201ENSMUST00000178005 107 ntBASIC2.51□□□□□ -2.01
Lims1Q99JW4 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.51□□□□□ -2.01
Lims1Q99JW4 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC2.51□□□□□ -2.01
Lims1Q99JW4 Gm25588-201ENSMUST00000082501 140 ntBASIC2.51□□□□□ -2.01
Lims1Q99JW4 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Lims1Q99JW4 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Lims1Q99JW4 Gm26341-201ENSMUST00000104561 134 ntBASIC2.5□□□□□ -2.01
Lims1Q99JW4 Gm23907-201ENSMUST00000104595 189 ntBASIC2.5□□□□□ -2.01
Lims1Q99JW4 Gm24598-201ENSMUST00000122510 74 ntBASIC2.5□□□□□ -2.01
Lims1Q99JW4 Gm22429-201ENSMUST00000158553 130 ntBASIC2.5□□□□□ -2.01
Lims1Q99JW4 Gm25491-201ENSMUST00000158733 308 ntBASIC2.5□□□□□ -2.01
Lims1Q99JW4 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Lims1Q99JW4 Gm44932-201ENSMUST00000206799 121 ntBASIC2.5□□□□□ -2.01
Lims1Q99JW4 n-R5s40-201ENSMUST00000082475 124 ntBASIC2.5□□□□□ -2.01
Lims1Q99JW4 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Lims1Q99JW4 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Lims1Q99JW4 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Lims1Q99JW4 AC154515.1-201ENSMUST00000226085 2841 ntBASIC2.5□□□□□ -2.01
Lims1Q99JW4 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
Lims1Q99JW4 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.49□□□□□ -2.01
Lims1Q99JW4 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Lims1Q99JW4 Gm24375-201ENSMUST00000104397 132 ntBASIC2.49□□□□□ -2.01
Lims1Q99JW4 Gm14568-201ENSMUST00000119321 294 ntBASIC2.49□□□□□ -2.01
Lims1Q99JW4 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.49□□□□□ -2.01
Lims1Q99JW4 Gm24718-201ENSMUST00000157521 136 ntBASIC2.49□□□□□ -2.01
Lims1Q99JW4 Gm22651-201ENSMUST00000157872 94 ntBASIC2.49□□□□□ -2.01
Lims1Q99JW4 Gm23268-201ENSMUST00000175494 78 ntBASIC2.49□□□□□ -2.01
Lims1Q99JW4 Gm28647-201ENSMUST00000188416 197 ntBASIC2.49□□□□□ -2.01
Lims1Q99JW4 Gm44491-201ENSMUST00000196794 96 ntBASIC2.49□□□□□ -2.01
Lims1Q99JW4 CT009696.1-201ENSMUST00000215745 256 ntBASIC2.49□□□□□ -2.01
Lims1Q99JW4 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC2.49□□□□□ -2.01
Lims1Q99JW4 AC126939.3-201ENSMUST00000226061 166 ntBASIC2.49□□□□□ -2.01
Lims1Q99JW4 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Lims1Q99JW4 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.49□□□□□ -2.01
Lims1Q99JW4 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Lims1Q99JW4 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.48□□□□□ -2.01
Lims1Q99JW4 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Lims1Q99JW4 Gm44489-201ENSMUST00000104619 97 ntBASIC2.48□□□□□ -2.01
Lims1Q99JW4 Gm24691-201ENSMUST00000157762 140 ntBASIC2.48□□□□□ -2.01
Lims1Q99JW4 Gm23859-201ENSMUST00000158383 64 ntBASIC2.48□□□□□ -2.01
Lims1Q99JW4 Mir3103-201ENSMUST00000175474 67 ntBASIC2.48□□□□□ -2.01
Lims1Q99JW4 Gm5224-201ENSMUST00000183060 350 ntBASIC2.48□□□□□ -2.01
Lims1Q99JW4 Gm27505-201ENSMUST00000185071 110 ntBASIC2.48□□□□□ -2.01
Lims1Q99JW4 Mir7118-201ENSMUST00000197760 61 ntBASIC2.48□□□□□ -2.01
Lims1Q99JW4 Gm44464-201ENSMUST00000198010 138 ntBASIC2.48□□□□□ -2.01
Lims1Q99JW4 Gm24350-202ENSMUST00000198309 132 ntBASIC2.48□□□□□ -2.01
Lims1Q99JW4 Gm35736-201ENSMUST00000203681 313 ntBASIC2.48□□□□□ -2.01
Lims1Q99JW4 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.48□□□□□ -2.01
Lims1Q99JW4 Gm23509-201ENSMUST00000083080 160 ntBASIC2.48□□□□□ -2.01
Lims1Q99JW4 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
Lims1Q99JW4 AC164164.1-201ENSMUST00000223245 2340 ntBASIC2.47□□□□□ -2.01
Lims1Q99JW4 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Lims1Q99JW4 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 163.2 ms