Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Gm15692-201ENSMUST00000152173 352 ntBASIC1.87□□□□□ -2.11
H1fooQ8VIK3 Gm25051-201ENSMUST00000158602 249 ntBASIC1.87□□□□□ -2.11
H1fooQ8VIK3 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.87□□□□□ -2.11
H1fooQ8VIK3 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC1.87□□□□□ -2.11
H1fooQ8VIK3 Mir3103-201ENSMUST00000175474 67 ntBASIC1.87□□□□□ -2.11
H1fooQ8VIK3 Gm24805-201ENSMUST00000082931 104 ntBASIC1.87□□□□□ -2.11
H1fooQ8VIK3 Gm24929-201ENSMUST00000083403 139 ntBASIC1.87□□□□□ -2.11
H1fooQ8VIK3 Mir34a-201ENSMUST00000083559 102 ntBASIC1.87□□□□□ -2.11
H1fooQ8VIK3 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.87□□□□□ -2.11
H1fooQ8VIK3 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC1.87□□□□□ -2.11
H1fooQ8VIK3 Gm14917-201ENSMUST00000118872 2105 ntBASIC1.87□□□□□ -2.11
H1fooQ8VIK3 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
H1fooQ8VIK3 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
H1fooQ8VIK3 Gm23889-201ENSMUST00000122689 104 ntBASIC1.86□□□□□ -2.11
H1fooQ8VIK3 Gm22083-201ENSMUST00000157586 102 ntBASIC1.86□□□□□ -2.11
H1fooQ8VIK3 Gm23209-201ENSMUST00000158667 110 ntBASIC1.86□□□□□ -2.11
H1fooQ8VIK3 Mir7014-201ENSMUST00000183853 63 ntBASIC1.86□□□□□ -2.11
H1fooQ8VIK3 Gm27369-201ENSMUST00000185182 71 ntBASIC1.86□□□□□ -2.11
H1fooQ8VIK3 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC1.86□□□□□ -2.11
H1fooQ8VIK3 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC1.86□□□□□ -2.11
H1fooQ8VIK3 Mir221-201ENSMUST00000083488 95 ntBASIC1.86□□□□□ -2.11
H1fooQ8VIK3 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
H1fooQ8VIK3 Gm24634-201ENSMUST00000158672 107 ntBASIC1.85□□□□□ -2.11
H1fooQ8VIK3 Gm23181-201ENSMUST00000158685 110 ntBASIC1.85□□□□□ -2.11
H1fooQ8VIK3 Gm5900-201ENSMUST00000179862 375 ntBASIC1.85□□□□□ -2.11
H1fooQ8VIK3 Gm26864-201ENSMUST00000181346 156 ntBASIC1.85□□□□□ -2.11
H1fooQ8VIK3 Gm44325-201ENSMUST00000196757 77 ntBASIC1.85□□□□□ -2.11
H1fooQ8VIK3 Mir721-201ENSMUST00000200230 88 ntBASIC1.85□□□□□ -2.11
H1fooQ8VIK3 Gm18188-201ENSMUST00000219386 478 ntBASIC1.85□□□□□ -2.11
H1fooQ8VIK3 AC159885.1-201ENSMUST00000222221 199 ntBASIC1.85□□□□□ -2.11
H1fooQ8VIK3 Gm25697-201ENSMUST00000082902 98 ntBASIC1.85□□□□□ -2.11
H1fooQ8VIK3 n-R5s183-201ENSMUST00000083939 115 ntBASIC1.85□□□□□ -2.11
H1fooQ8VIK3 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
H1fooQ8VIK3 Gm24683-201ENSMUST00000104840 88 ntBASIC1.84□□□□□ -2.11
H1fooQ8VIK3 Gm23988-201ENSMUST00000117034 122 ntBASIC1.84□□□□□ -2.11
H1fooQ8VIK3 Gm6952-201ENSMUST00000118629 159 ntBASIC1.84□□□□□ -2.11
H1fooQ8VIK3 Gm22482-201ENSMUST00000122563 359 ntBASIC1.84□□□□□ -2.11
H1fooQ8VIK3 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC1.84□□□□□ -2.11
H1fooQ8VIK3 Gm16510-201ENSMUST00000153501 249 ntBASIC1.84□□□□□ -2.11
H1fooQ8VIK3 Mir3075-201ENSMUST00000175340 85 ntBASIC1.84□□□□□ -2.11
H1fooQ8VIK3 Gm25464-201ENSMUST00000175481 107 ntBASIC1.84□□□□□ -2.11
H1fooQ8VIK3 Gm25730-201ENSMUST00000178753 165 ntBASIC1.84□□□□□ -2.11
H1fooQ8VIK3 Gm21885-201ENSMUST00000178891 327 ntBASIC1.84□□□□□ -2.11
H1fooQ8VIK3 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.84□□□□□ -2.11
H1fooQ8VIK3 Gm29604-201ENSMUST00000187176 163 ntBASIC1.84□□□□□ -2.11
H1fooQ8VIK3 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.84□□□□□ -2.11
H1fooQ8VIK3 Gm43877-201ENSMUST00000205029 2238 ntBASIC1.84□□□□□ -2.11
H1fooQ8VIK3 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
H1fooQ8VIK3 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC1.83□□□□□ -2.12
H1fooQ8VIK3 Gm22337-201ENSMUST00000157721 132 ntBASIC1.83□□□□□ -2.12
H1fooQ8VIK3 Gm22500-201ENSMUST00000158982 99 ntBASIC1.83□□□□□ -2.12
H1fooQ8VIK3 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
H1fooQ8VIK3 Trbv7-201ENSMUST00000193339 402 ntBASIC1.83□□□□□ -2.12
H1fooQ8VIK3 Mir7021-201ENSMUST00000197026 63 ntBASIC1.83□□□□□ -2.12
H1fooQ8VIK3 Mir6925-201ENSMUST00000197857 70 ntBASIC1.83□□□□□ -2.12
H1fooQ8VIK3 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC1.83□□□□□ -2.12
H1fooQ8VIK3 Hmgb1l-201ENSMUST00000082150 571 ntBASIC1.83□□□□□ -2.12
H1fooQ8VIK3 Snord7-201ENSMUST00000083781 97 ntBASIC1.83□□□□□ -2.12
H1fooQ8VIK3 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
H1fooQ8VIK3 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
H1fooQ8VIK3 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.82□□□□□ -2.12
H1fooQ8VIK3 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
H1fooQ8VIK3 Mir127-201ENSMUST00000093568 70 ntBASIC1.82□□□□□ -2.12
H1fooQ8VIK3 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
H1fooQ8VIK3 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC1.81□□□□□ -2.12
H1fooQ8VIK3 Gm14674-201ENSMUST00000117816 342 ntBASIC1.81□□□□□ -2.12
H1fooQ8VIK3 n-R5s164-201ENSMUST00000122664 112 ntBASIC1.81□□□□□ -2.12
H1fooQ8VIK3 Gm25985-201ENSMUST00000122677 107 ntBASIC1.81□□□□□ -2.12
H1fooQ8VIK3 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC1.81□□□□□ -2.12
H1fooQ8VIK3 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.81□□□□□ -2.12
H1fooQ8VIK3 Gm23898-201ENSMUST00000158111 103 ntBASIC1.81□□□□□ -2.12
H1fooQ8VIK3 Gm24358-201ENSMUST00000158424 288 ntBASIC1.81□□□□□ -2.12
H1fooQ8VIK3 Gm23208-201ENSMUST00000158666 127 ntBASIC1.81□□□□□ -2.12
H1fooQ8VIK3 Gm22093-201ENSMUST00000158980 111 ntBASIC1.81□□□□□ -2.12
H1fooQ8VIK3 Mir7217-201ENSMUST00000200304 62 ntBASIC1.81□□□□□ -2.12
H1fooQ8VIK3 Gm5002-201ENSMUST00000207145 223 ntBASIC1.81□□□□□ -2.12
H1fooQ8VIK3 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.81□□□□□ -2.12
H1fooQ8VIK3 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
H1fooQ8VIK3 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC1.8□□□□□ -2.12
H1fooQ8VIK3 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
H1fooQ8VIK3 Gm26015-201ENSMUST00000104402 125 ntBASIC1.8□□□□□ -2.12
H1fooQ8VIK3 Gm24274-201ENSMUST00000116787 124 ntBASIC1.8□□□□□ -2.12
H1fooQ8VIK3 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC1.8□□□□□ -2.12
H1fooQ8VIK3 Gm24366-201ENSMUST00000175383 86 ntBASIC1.8□□□□□ -2.12
H1fooQ8VIK3 Mir7068-201ENSMUST00000183439 74 ntBASIC1.8□□□□□ -2.12
H1fooQ8VIK3 Gm27699-201ENSMUST00000183553 180 ntBASIC1.8□□□□□ -2.12
H1fooQ8VIK3 Gm37997-201ENSMUST00000193515 267 ntBASIC1.8□□□□□ -2.12
H1fooQ8VIK3 Gm43602-201ENSMUST00000196772 300 ntBASIC1.8□□□□□ -2.12
H1fooQ8VIK3 Snord80-202ENSMUST00000199023 77 ntBASIC1.8□□□□□ -2.12
H1fooQ8VIK3 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC1.8□□□□□ -2.12
H1fooQ8VIK3 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.8□□□□□ -2.12
H1fooQ8VIK3 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.8□□□□□ -2.12
H1fooQ8VIK3 n-R5s188-201ENSMUST00000122646 105 ntBASIC1.79□□□□□ -2.12
H1fooQ8VIK3 Gm26160-201ENSMUST00000158965 63 ntBASIC1.79□□□□□ -2.12
H1fooQ8VIK3 Gm22911-201ENSMUST00000177920 107 ntBASIC1.79□□□□□ -2.12
H1fooQ8VIK3 Mir6350-201ENSMUST00000183639 105 ntBASIC1.79□□□□□ -2.12
H1fooQ8VIK3 Gm9251-201ENSMUST00000197202 628 ntBASIC1.79□□□□□ -2.12
H1fooQ8VIK3 Mir7118-201ENSMUST00000197760 61 ntBASIC1.79□□□□□ -2.12
H1fooQ8VIK3 AC129085.1-201ENSMUST00000225263 165 ntBASIC1.79□□□□□ -2.12
H1fooQ8VIK3 AC133517.1-203ENSMUST00000225570 390 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 157.9 ms