Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm3702-201ENSMUST00000211754 346 ntBASIC-0.12□□□□□ -2.43
Nup35Q8R4R6 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC-0.13□□□□□ -2.43
Nup35Q8R4R6 Gm24555-201ENSMUST00000104548 124 ntBASIC-0.13□□□□□ -2.43
Nup35Q8R4R6 Gm17132-201ENSMUST00000109542 1158 ntBASIC-0.13□□□□□ -2.43
Nup35Q8R4R6 Gm22520-201ENSMUST00000158269 129 ntBASIC-0.13□□□□□ -2.43
Nup35Q8R4R6 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC-0.13□□□□□ -2.43
Nup35Q8R4R6 Gm25814-201ENSMUST00000082754 107 ntBASIC-0.13□□□□□ -2.43
Nup35Q8R4R6 Snord98-201ENSMUST00000116819 65 ntBASIC-0.14□□□□□ -2.43
Nup35Q8R4R6 Gm14536-201ENSMUST00000118324 138 ntBASIC-0.14□□□□□ -2.43
Nup35Q8R4R6 Gm15027-201ENSMUST00000120922 138 ntBASIC-0.14□□□□□ -2.43
Nup35Q8R4R6 Gm22113-201ENSMUST00000158343 104 ntBASIC-0.14□□□□□ -2.43
Nup35Q8R4R6 CT030645.1-201ENSMUST00000224020 231 ntBASIC-0.14□□□□□ -2.43
Nup35Q8R4R6 AC129208.2-201ENSMUST00000228506 320 ntBASIC-0.14□□□□□ -2.43
Nup35Q8R4R6 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC-0.14□□□□□ -2.43
Nup35Q8R4R6 Gm22283-201ENSMUST00000082556 161 ntBASIC-0.14□□□□□ -2.43
Nup35Q8R4R6 Gm23041-201ENSMUST00000083868 106 ntBASIC-0.14□□□□□ -2.43
Nup35Q8R4R6 Gm10730-201ENSMUST00000194097 2723 ntBASIC-0.14□□□□□ -2.43
Nup35Q8R4R6 Gm22834-201ENSMUST00000102021 79 ntBASIC-0.15□□□□□ -2.43
Nup35Q8R4R6 Gm14782-201ENSMUST00000120151 195 ntBASIC-0.15□□□□□ -2.43
Nup35Q8R4R6 Gm14287-201ENSMUST00000121060 117 ntBASIC-0.15□□□□□ -2.43
Nup35Q8R4R6 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC-0.15□□□□□ -2.43
Nup35Q8R4R6 Gm18588-201ENSMUST00000177308 492 ntBASIC-0.15□□□□□ -2.43
Nup35Q8R4R6 Gm28001-201ENSMUST00000183561 117 ntBASIC-0.15□□□□□ -2.43
Nup35Q8R4R6 Mir7079-201ENSMUST00000184697 69 ntBASIC-0.15□□□□□ -2.43
Nup35Q8R4R6 Gm37438-201ENSMUST00000192813 393 ntBASIC-0.15□□□□□ -2.43
Nup35Q8R4R6 Gm44135-201ENSMUST00000205221 368 ntBASIC-0.15□□□□□ -2.43
Nup35Q8R4R6 Gm45374-201ENSMUST00000211388 136 ntBASIC-0.15□□□□□ -2.43
Nup35Q8R4R6 Gm5023-201ENSMUST00000217442 587 ntBASIC-0.15□□□□□ -2.43
Nup35Q8R4R6 Gm23851-201ENSMUST00000083831 103 ntBASIC-0.15□□□□□ -2.43
Nup35Q8R4R6 Mir463-201ENSMUST00000093570 75 ntBASIC-0.15□□□□□ -2.43
Nup35Q8R4R6 Gm26135-201ENSMUST00000101993 72 ntBASIC-0.16□□□□□ -2.44
Nup35Q8R4R6 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC-0.16□□□□□ -2.44
Nup35Q8R4R6 Gm23531-201ENSMUST00000104567 68 ntBASIC-0.16□□□□□ -2.44
Nup35Q8R4R6 Gm25309-201ENSMUST00000116728 126 ntBASIC-0.16□□□□□ -2.44
Nup35Q8R4R6 Gm25317-201ENSMUST00000116824 129 ntBASIC-0.16□□□□□ -2.44
Nup35Q8R4R6 Gm23584-201ENSMUST00000157655 129 ntBASIC-0.16□□□□□ -2.44
Nup35Q8R4R6 Gm22447-201ENSMUST00000158155 92 ntBASIC-0.16□□□□□ -2.44
Nup35Q8R4R6 Snord50b-201ENSMUST00000178497 72 ntBASIC-0.16□□□□□ -2.44
Nup35Q8R4R6 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC-0.16□□□□□ -2.44
Nup35Q8R4R6 Mir6905-201ENSMUST00000184228 70 ntBASIC-0.16□□□□□ -2.44
Nup35Q8R4R6 Gm6003-201ENSMUST00000187903 463 ntBASIC-0.16□□□□□ -2.44
Nup35Q8R4R6 Gm44055-201ENSMUST00000204376 247 ntBASIC-0.16□□□□□ -2.44
Nup35Q8R4R6 Gm25859-201ENSMUST00000083710 91 ntBASIC-0.16□□□□□ -2.44
Nup35Q8R4R6 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC-0.17□□□□□ -2.44
Nup35Q8R4R6 Gm23783-201ENSMUST00000157941 102 ntBASIC-0.17□□□□□ -2.44
Nup35Q8R4R6 Gm25434-201ENSMUST00000158278 167 ntBASIC-0.17□□□□□ -2.44
Nup35Q8R4R6 Gm22088-201ENSMUST00000158341 117 ntBASIC-0.17□□□□□ -2.44
Nup35Q8R4R6 Gm24500-201ENSMUST00000158447 124 ntBASIC-0.17□□□□□ -2.44
Nup35Q8R4R6 Gm24549-201ENSMUST00000158647 139 ntBASIC-0.17□□□□□ -2.44
Nup35Q8R4R6 Gm24315-201ENSMUST00000177835 127 ntBASIC-0.17□□□□□ -2.44
Nup35Q8R4R6 Gm28917-201ENSMUST00000187294 237 ntBASIC-0.17□□□□□ -2.44
Nup35Q8R4R6 Gm28766-201ENSMUST00000191086 234 ntBASIC-0.17□□□□□ -2.44
Nup35Q8R4R6 Gm37337-201ENSMUST00000192601 993 ntBASIC-0.17□□□□□ -2.44
Nup35Q8R4R6 Gm43367-201ENSMUST00000199986 625 ntBASIC-0.17□□□□□ -2.44
Nup35Q8R4R6 AC147101.1-201ENSMUST00000217964 312 ntBASIC-0.17□□□□□ -2.44
Nup35Q8R4R6 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC-0.17□□□□□ -2.44
Nup35Q8R4R6 Gm25801-201ENSMUST00000082638 106 ntBASIC-0.17□□□□□ -2.44
Nup35Q8R4R6 Mir582-201ENSMUST00000103758 81 ntBASIC-0.18□□□□□ -2.44
Nup35Q8R4R6 Gm25110-201ENSMUST00000116684 121 ntBASIC-0.18□□□□□ -2.44
Nup35Q8R4R6 Gm25775-201ENSMUST00000116716 121 ntBASIC-0.18□□□□□ -2.44
Nup35Q8R4R6 Gm24795-201ENSMUST00000116737 121 ntBASIC-0.18□□□□□ -2.44
Nup35Q8R4R6 Gm25171-201ENSMUST00000116926 121 ntBASIC-0.18□□□□□ -2.44
Nup35Q8R4R6 Gm24903-201ENSMUST00000158131 126 ntBASIC-0.18□□□□□ -2.44
Nup35Q8R4R6 Gm23113-201ENSMUST00000158477 99 ntBASIC-0.18□□□□□ -2.44
Nup35Q8R4R6 Mir1931-201ENSMUST00000158589 119 ntBASIC-0.18□□□□□ -2.44
Nup35Q8R4R6 Gm25284-201ENSMUST00000180345 141 ntBASIC-0.18□□□□□ -2.44
Nup35Q8R4R6 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC-0.18□□□□□ -2.44
Nup35Q8R4R6 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC-0.18□□□□□ -2.44
Nup35Q8R4R6 Gm24283-201ENSMUST00000104233 107 ntBASIC-0.19□□□□□ -2.44
Nup35Q8R4R6 Gm22021-201ENSMUST00000104353 107 ntBASIC-0.19□□□□□ -2.44
Nup35Q8R4R6 Gm14491-201ENSMUST00000121919 199 ntBASIC-0.19□□□□□ -2.44
Nup35Q8R4R6 Gm14413-201ENSMUST00000122158 408 ntBASIC-0.19□□□□□ -2.44
Nup35Q8R4R6 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC-0.19□□□□□ -2.44
Nup35Q8R4R6 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC-0.19□□□□□ -2.44
Nup35Q8R4R6 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC-0.19□□□□□ -2.44
Nup35Q8R4R6 Gm24909-201ENSMUST00000157290 280 ntBASIC-0.19□□□□□ -2.44
Nup35Q8R4R6 Gm25882-201ENSMUST00000157784 85 ntBASIC-0.19□□□□□ -2.44
Nup35Q8R4R6 Gm24000-201ENSMUST00000158063 89 ntBASIC-0.19□□□□□ -2.44
Nup35Q8R4R6 Gm22466-201ENSMUST00000175278 69 ntBASIC-0.19□□□□□ -2.44
Nup35Q8R4R6 Gm24575-201ENSMUST00000175502 77 ntBASIC-0.19□□□□□ -2.44
Nup35Q8R4R6 Mir7229-201ENSMUST00000197062 53 ntBASIC-0.19□□□□□ -2.44
Nup35Q8R4R6 Gm45543-201ENSMUST00000209327 88 ntBASIC-0.19□□□□□ -2.44
Nup35Q8R4R6 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.19□□□□□ -2.44
Nup35Q8R4R6 Mir200a-201ENSMUST00000083466 90 ntBASIC-0.19□□□□□ -2.44
Nup35Q8R4R6 Mirlet7g-201ENSMUST00000083506 88 ntBASIC-0.19□□□□□ -2.44
Nup35Q8R4R6 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC-0.19□□□□□ -2.44
Nup35Q8R4R6 Mir672-201ENSMUST00000102331 100 ntBASIC-0.2□□□□□ -2.44
Nup35Q8R4R6 Snord69-201ENSMUST00000104024 80 ntBASIC-0.2□□□□□ -2.44
Nup35Q8R4R6 Gm23989-201ENSMUST00000117030 66 ntBASIC-0.2□□□□□ -2.44
Nup35Q8R4R6 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC-0.2□□□□□ -2.44
Nup35Q8R4R6 Gm24901-201ENSMUST00000158125 110 ntBASIC-0.2□□□□□ -2.44
Nup35Q8R4R6 Gm25375-201ENSMUST00000158157 135 ntBASIC-0.2□□□□□ -2.44
Nup35Q8R4R6 Gm16307-201ENSMUST00000161269 210 ntBASIC-0.2□□□□□ -2.44
Nup35Q8R4R6 Gm22166-201ENSMUST00000178419 121 ntBASIC-0.2□□□□□ -2.44
Nup35Q8R4R6 Gm23288-201ENSMUST00000179213 121 ntBASIC-0.2□□□□□ -2.44
Nup35Q8R4R6 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC-0.2□□□□□ -2.44
Nup35Q8R4R6 Gm18185-201ENSMUST00000186725 667 ntBASIC-0.2□□□□□ -2.44
Nup35Q8R4R6 Gm37586-201ENSMUST00000193654 204 ntBASIC-0.2□□□□□ -2.44
Nup35Q8R4R6 Gm45508-201ENSMUST00000209298 299 ntBASIC-0.2□□□□□ -2.44
Nup35Q8R4R6 AL929265.1-201ENSMUST00000213427 125 ntBASIC-0.2□□□□□ -2.44
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms