Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm24410-201ENSMUST00000083433 107 ntBASIC2.31□□□□□ -2.04
Clrn1Q8K445 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC2.31□□□□□ -2.04
Clrn1Q8K445 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Clrn1Q8K445 Mir542-201ENSMUST00000102186 85 ntBASIC2.3□□□□□ -2.04
Clrn1Q8K445 Gm24049-201ENSMUST00000102409 100 ntBASIC2.3□□□□□ -2.04
Clrn1Q8K445 Gm24122-201ENSMUST00000104107 132 ntBASIC2.3□□□□□ -2.04
Clrn1Q8K445 Snora36b-201ENSMUST00000104383 132 ntBASIC2.3□□□□□ -2.04
Clrn1Q8K445 Gm22279-201ENSMUST00000157200 93 ntBASIC2.3□□□□□ -2.04
Clrn1Q8K445 Gm25882-201ENSMUST00000157784 85 ntBASIC2.3□□□□□ -2.04
Clrn1Q8K445 Gm24212-201ENSMUST00000158258 132 ntBASIC2.3□□□□□ -2.04
Clrn1Q8K445 Gm26157-201ENSMUST00000158974 126 ntBASIC2.3□□□□□ -2.04
Clrn1Q8K445 Gm25996-201ENSMUST00000175393 117 ntBASIC2.3□□□□□ -2.04
Clrn1Q8K445 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Clrn1Q8K445 Gm3852-201ENSMUST00000182781 264 ntBASIC2.3□□□□□ -2.04
Clrn1Q8K445 Mir7014-201ENSMUST00000183853 63 ntBASIC2.3□□□□□ -2.04
Clrn1Q8K445 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC2.3□□□□□ -2.04
Clrn1Q8K445 Gm8219-201ENSMUST00000218309 242 ntBASIC2.3□□□□□ -2.04
Clrn1Q8K445 mt-Ta-201ENSMUST00000082398 69 ntBASIC2.3□□□□□ -2.04
Clrn1Q8K445 Gm24461-201ENSMUST00000082735 103 ntBASIC2.3□□□□□ -2.04
Clrn1Q8K445 Gm23249-201ENSMUST00000083369 161 ntBASIC2.3□□□□□ -2.04
Clrn1Q8K445 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
Clrn1Q8K445 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Clrn1Q8K445 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.29□□□□□ -2.04
Clrn1Q8K445 Gm26473-201ENSMUST00000116763 127 ntBASIC2.29□□□□□ -2.04
Clrn1Q8K445 Gm22151-201ENSMUST00000116963 58 ntBASIC2.29□□□□□ -2.04
Clrn1Q8K445 Gm23854-201ENSMUST00000158378 108 ntBASIC2.29□□□□□ -2.04
Clrn1Q8K445 Gm24922-201ENSMUST00000158511 102 ntBASIC2.29□□□□□ -2.04
Clrn1Q8K445 Mir3103-201ENSMUST00000175474 67 ntBASIC2.29□□□□□ -2.04
Clrn1Q8K445 Mir7039-201ENSMUST00000183852 85 ntBASIC2.29□□□□□ -2.04
Clrn1Q8K445 Gm22306-201ENSMUST00000082692 107 ntBASIC2.29□□□□□ -2.04
Clrn1Q8K445 Gm24705-201ENSMUST00000082808 107 ntBASIC2.29□□□□□ -2.04
Clrn1Q8K445 Gm26494-201ENSMUST00000083154 143 ntBASIC2.29□□□□□ -2.04
Clrn1Q8K445 Snord61-201ENSMUST00000083176 71 ntBASIC2.29□□□□□ -2.04
Clrn1Q8K445 Mir301-201ENSMUST00000083655 86 ntBASIC2.29□□□□□ -2.04
Clrn1Q8K445 Gm24493-201ENSMUST00000083805 143 ntBASIC2.29□□□□□ -2.04
Clrn1Q8K445 Gm22681-201ENSMUST00000083853 106 ntBASIC2.29□□□□□ -2.04
Clrn1Q8K445 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
Clrn1Q8K445 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Clrn1Q8K445 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Clrn1Q8K445 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.28□□□□□ -2.04
Clrn1Q8K445 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Clrn1Q8K445 Gm25945-201ENSMUST00000122484 135 ntBASIC2.28□□□□□ -2.04
Clrn1Q8K445 Gm23390-201ENSMUST00000157393 106 ntBASIC2.28□□□□□ -2.04
Clrn1Q8K445 Gm24717-201ENSMUST00000157522 124 ntBASIC2.28□□□□□ -2.04
Clrn1Q8K445 Gm26406-201ENSMUST00000158503 124 ntBASIC2.28□□□□□ -2.04
Clrn1Q8K445 Gm22416-201ENSMUST00000158590 88 ntBASIC2.28□□□□□ -2.04
Clrn1Q8K445 Gm25119-201ENSMUST00000158815 88 ntBASIC2.28□□□□□ -2.04
Clrn1Q8K445 Gm18665-201ENSMUST00000189783 270 ntBASIC2.28□□□□□ -2.04
Clrn1Q8K445 Ighv1-1-201ENSMUST00000194912 291 ntBASIC2.28□□□□□ -2.04
Clrn1Q8K445 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Clrn1Q8K445 Gm44976-201ENSMUST00000205543 261 ntBASIC2.28□□□□□ -2.04
Clrn1Q8K445 Gm8031-201ENSMUST00000213430 626 ntBASIC2.28□□□□□ -2.04
Clrn1Q8K445 AC129085.1-201ENSMUST00000225263 165 ntBASIC2.28□□□□□ -2.04
Clrn1Q8K445 Mir201-201ENSMUST00000083470 66 ntBASIC2.28□□□□□ -2.04
Clrn1Q8K445 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.28□□□□□ -2.04
Clrn1Q8K445 Gm15069-201ENSMUST00000117792 192 ntBASIC2.27□□□□□ -2.05
Clrn1Q8K445 Gm15068-201ENSMUST00000119796 192 ntBASIC2.27□□□□□ -2.05
Clrn1Q8K445 Gm13246-201ENSMUST00000120994 315 ntBASIC2.27□□□□□ -2.05
Clrn1Q8K445 Gm25884-201ENSMUST00000157782 62 ntBASIC2.27□□□□□ -2.05
Clrn1Q8K445 Gm42719-201ENSMUST00000197393 355 ntBASIC2.27□□□□□ -2.05
Clrn1Q8K445 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC2.27□□□□□ -2.05
Clrn1Q8K445 Gm22752-201ENSMUST00000102083 109 ntBASIC2.26□□□□□ -2.05
Clrn1Q8K445 Gm22674-201ENSMUST00000104413 131 ntBASIC2.26□□□□□ -2.05
Clrn1Q8K445 Gm13756-201ENSMUST00000117618 222 ntBASIC2.26□□□□□ -2.05
Clrn1Q8K445 Gm14626-201ENSMUST00000117619 216 ntBASIC2.26□□□□□ -2.05
Clrn1Q8K445 Gm7209-201ENSMUST00000122339 333 ntBASIC2.26□□□□□ -2.05
Clrn1Q8K445 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.26□□□□□ -2.05
Clrn1Q8K445 Gm23980-201ENSMUST00000157135 158 ntBASIC2.26□□□□□ -2.05
Clrn1Q8K445 Gm25866-201ENSMUST00000158245 112 ntBASIC2.26□□□□□ -2.05
Clrn1Q8K445 Gm22163-201ENSMUST00000158408 135 ntBASIC2.26□□□□□ -2.05
Clrn1Q8K445 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.26□□□□□ -2.05
Clrn1Q8K445 Gm24148-201ENSMUST00000082762 80 ntBASIC2.26□□□□□ -2.05
Clrn1Q8K445 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Clrn1Q8K445 Gm26011-201ENSMUST00000104410 104 ntBASIC2.25□□□□□ -2.05
Clrn1Q8K445 Gm11644-201ENSMUST00000119735 150 ntBASIC2.25□□□□□ -2.05
Clrn1Q8K445 AC159885.1-201ENSMUST00000222221 199 ntBASIC2.25□□□□□ -2.05
Clrn1Q8K445 Gm7214-201ENSMUST00000222428 272 ntBASIC2.25□□□□□ -2.05
Clrn1Q8K445 Gm25797-201ENSMUST00000082640 107 ntBASIC2.25□□□□□ -2.05
Clrn1Q8K445 Gm24038-201ENSMUST00000082872 159 ntBASIC2.25□□□□□ -2.05
Clrn1Q8K445 Gm25627-201ENSMUST00000084003 153 ntBASIC2.25□□□□□ -2.05
Clrn1Q8K445 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Clrn1Q8K445 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
Clrn1Q8K445 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.24□□□□□ -2.05
Clrn1Q8K445 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Clrn1Q8K445 Gm45461-201ENSMUST00000211726 4535 ntBASIC2.24□□□□□ -2.05
Clrn1Q8K445 Gm26074-201ENSMUST00000104063 129 ntBASIC2.24□□□□□ -2.05
Clrn1Q8K445 Gm22782-201ENSMUST00000104082 132 ntBASIC2.24□□□□□ -2.05
Clrn1Q8K445 n-R5s15-201ENSMUST00000122635 111 ntBASIC2.24□□□□□ -2.05
Clrn1Q8K445 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC2.24□□□□□ -2.05
Clrn1Q8K445 Gm24559-201ENSMUST00000157519 121 ntBASIC2.24□□□□□ -2.05
Clrn1Q8K445 Gm24747-201ENSMUST00000157835 87 ntBASIC2.24□□□□□ -2.05
Clrn1Q8K445 Gm24075-201ENSMUST00000158175 72 ntBASIC2.24□□□□□ -2.05
Clrn1Q8K445 Gm24210-201ENSMUST00000158263 133 ntBASIC2.24□□□□□ -2.05
Clrn1Q8K445 Gm44358-201ENSMUST00000196301 98 ntBASIC2.24□□□□□ -2.05
Clrn1Q8K445 Gm23303-201ENSMUST00000082714 152 ntBASIC2.24□□□□□ -2.05
Clrn1Q8K445 Gm25357-201ENSMUST00000082745 72 ntBASIC2.24□□□□□ -2.05
Clrn1Q8K445 Gm23445-201ENSMUST00000082800 107 ntBASIC2.24□□□□□ -2.05
Clrn1Q8K445 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Clrn1Q8K445 Gm22790-201ENSMUST00000157229 129 ntBASIC2.23□□□□□ -2.05
Clrn1Q8K445 Gm25060-201ENSMUST00000157374 130 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 148.9 ms