Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm25513-201ENSMUST00000083861 162 ntBASIC1.58□□□□□ -2.16
Ccdc28bQ8CEG5 Gm37602-201ENSMUST00000195187 3310 ntBASIC1.58□□□□□ -2.16
Ccdc28bQ8CEG5 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.58□□□□□ -2.16
Ccdc28bQ8CEG5 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.58□□□□□ -2.16
Ccdc28bQ8CEG5 Mir466p-201ENSMUST00000103925 89 ntBASIC1.57□□□□□ -2.16
Ccdc28bQ8CEG5 Gm22051-201ENSMUST00000117002 127 ntBASIC1.57□□□□□ -2.16
Ccdc28bQ8CEG5 Gm23230-201ENSMUST00000157298 133 ntBASIC1.57□□□□□ -2.16
Ccdc28bQ8CEG5 Gm25494-201ENSMUST00000158143 100 ntBASIC1.57□□□□□ -2.16
Ccdc28bQ8CEG5 Gm27465-201ENSMUST00000184290 91 ntBASIC1.57□□□□□ -2.16
Ccdc28bQ8CEG5 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
Ccdc28bQ8CEG5 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.57□□□□□ -2.16
Ccdc28bQ8CEG5 AC122320.1-201ENSMUST00000227233 105 ntBASIC1.57□□□□□ -2.16
Ccdc28bQ8CEG5 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.57□□□□□ -2.16
Ccdc28bQ8CEG5 Gm22674-201ENSMUST00000104413 131 ntBASIC1.56□□□□□ -2.16
Ccdc28bQ8CEG5 Gm24595-201ENSMUST00000122501 110 ntBASIC1.56□□□□□ -2.16
Ccdc28bQ8CEG5 Gm22075-201ENSMUST00000158599 192 ntBASIC1.56□□□□□ -2.16
Ccdc28bQ8CEG5 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
Ccdc28bQ8CEG5 Gm29603-201ENSMUST00000186792 334 ntBASIC1.56□□□□□ -2.16
Ccdc28bQ8CEG5 Gm28383-201ENSMUST00000187563 139 ntBASIC1.56□□□□□ -2.16
Ccdc28bQ8CEG5 Gm43199-201ENSMUST00000200019 307 ntBASIC1.56□□□□□ -2.16
Ccdc28bQ8CEG5 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC1.56□□□□□ -2.16
Ccdc28bQ8CEG5 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.56□□□□□ -2.16
Ccdc28bQ8CEG5 Mir155-201ENSMUST00000083463 65 ntBASIC1.56□□□□□ -2.16
Ccdc28bQ8CEG5 Gm23551-201ENSMUST00000116852 121 ntBASIC1.55□□□□□ -2.16
Ccdc28bQ8CEG5 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC1.55□□□□□ -2.16
Ccdc28bQ8CEG5 Gm23172-201ENSMUST00000157160 124 ntBASIC1.55□□□□□ -2.16
Ccdc28bQ8CEG5 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.55□□□□□ -2.16
Ccdc28bQ8CEG5 Gm26181-201ENSMUST00000157687 106 ntBASIC1.55□□□□□ -2.16
Ccdc28bQ8CEG5 Gm23221-201ENSMUST00000158118 93 ntBASIC1.55□□□□□ -2.16
Ccdc28bQ8CEG5 Gm22768-201ENSMUST00000158366 153 ntBASIC1.55□□□□□ -2.16
Ccdc28bQ8CEG5 Gm23854-201ENSMUST00000158378 108 ntBASIC1.55□□□□□ -2.16
Ccdc28bQ8CEG5 Mir669k-201ENSMUST00000177742 127 ntBASIC1.55□□□□□ -2.16
Ccdc28bQ8CEG5 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC1.55□□□□□ -2.16
Ccdc28bQ8CEG5 Gm25673-201ENSMUST00000179957 127 ntBASIC1.55□□□□□ -2.16
Ccdc28bQ8CEG5 Gm43427-201ENSMUST00000198188 331 ntBASIC1.55□□□□□ -2.16
Ccdc28bQ8CEG5 AC098718.1-201ENSMUST00000226166 175 ntBASIC1.55□□□□□ -2.16
Ccdc28bQ8CEG5 Snord47-201ENSMUST00000083034 77 ntBASIC1.55□□□□□ -2.16
Ccdc28bQ8CEG5 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Ccdc28bQ8CEG5 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
Ccdc28bQ8CEG5 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.54□□□□□ -2.16
Ccdc28bQ8CEG5 Mir293-201ENSMUST00000104841 80 ntBASIC1.54□□□□□ -2.16
Ccdc28bQ8CEG5 Mir1195-201ENSMUST00000116818 98 ntBASIC1.54□□□□□ -2.16
Ccdc28bQ8CEG5 Gm25825-201ENSMUST00000157091 124 ntBASIC1.54□□□□□ -2.16
Ccdc28bQ8CEG5 Gm25371-201ENSMUST00000158162 101 ntBASIC1.54□□□□□ -2.16
Ccdc28bQ8CEG5 Gm25267-201ENSMUST00000158522 63 ntBASIC1.54□□□□□ -2.16
Ccdc28bQ8CEG5 Mir3092-201ENSMUST00000174954 96 ntBASIC1.54□□□□□ -2.16
Ccdc28bQ8CEG5 Mir7081-201ENSMUST00000184490 75 ntBASIC1.54□□□□□ -2.16
Ccdc28bQ8CEG5 Mir1a-2-201ENSMUST00000198520 72 ntBASIC1.54□□□□□ -2.16
Ccdc28bQ8CEG5 Gm44384-201ENSMUST00000200208 114 ntBASIC1.54□□□□□ -2.16
Ccdc28bQ8CEG5 CT010449.1-201ENSMUST00000220624 153 ntBASIC1.54□□□□□ -2.16
Ccdc28bQ8CEG5 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.54□□□□□ -2.16
Ccdc28bQ8CEG5 Gm26204-201ENSMUST00000082906 107 ntBASIC1.54□□□□□ -2.16
Ccdc28bQ8CEG5 Gm25895-201ENSMUST00000083714 100 ntBASIC1.54□□□□□ -2.16
Ccdc28bQ8CEG5 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Ccdc28bQ8CEG5 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.53□□□□□ -2.16
Ccdc28bQ8CEG5 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Ccdc28bQ8CEG5 Gm25376-201ENSMUST00000104340 133 ntBASIC1.53□□□□□ -2.16
Ccdc28bQ8CEG5 Gm22586-201ENSMUST00000157507 122 ntBASIC1.53□□□□□ -2.16
Ccdc28bQ8CEG5 Snord13-201ENSMUST00000157627 104 ntBASIC1.53□□□□□ -2.16
Ccdc28bQ8CEG5 Mir6388-201ENSMUST00000184417 75 ntBASIC1.53□□□□□ -2.16
Ccdc28bQ8CEG5 Gm2077-201ENSMUST00000195017 319 ntBASIC1.53□□□□□ -2.16
Ccdc28bQ8CEG5 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.53□□□□□ -2.16
Ccdc28bQ8CEG5 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Ccdc28bQ8CEG5 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.53□□□□□ -2.16
Ccdc28bQ8CEG5 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
Ccdc28bQ8CEG5 Gm23548-201ENSMUST00000158963 106 ntBASIC1.52□□□□□ -2.17
Ccdc28bQ8CEG5 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.52□□□□□ -2.17
Ccdc28bQ8CEG5 Gm28344-201ENSMUST00000185704 279 ntBASIC1.52□□□□□ -2.17
Ccdc28bQ8CEG5 Gm6003-201ENSMUST00000187903 463 ntBASIC1.52□□□□□ -2.17
Ccdc28bQ8CEG5 Gm5010-201ENSMUST00000213131 260 ntBASIC1.52□□□□□ -2.17
Ccdc28bQ8CEG5 AC154994.1-201ENSMUST00000217395 302 ntBASIC1.52□□□□□ -2.17
Ccdc28bQ8CEG5 AC127371.3-201ENSMUST00000228129 415 ntBASIC1.52□□□□□ -2.17
Ccdc28bQ8CEG5 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
Ccdc28bQ8CEG5 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.51□□□□□ -2.17
Ccdc28bQ8CEG5 Snord72-201ENSMUST00000104549 81 ntBASIC1.51□□□□□ -2.17
Ccdc28bQ8CEG5 Gm23988-201ENSMUST00000117034 122 ntBASIC1.51□□□□□ -2.17
Ccdc28bQ8CEG5 Gm15536-201ENSMUST00000121411 114 ntBASIC1.51□□□□□ -2.17
Ccdc28bQ8CEG5 Gm24895-201ENSMUST00000122742 74 ntBASIC1.51□□□□□ -2.17
Ccdc28bQ8CEG5 Gm23390-201ENSMUST00000157393 106 ntBASIC1.51□□□□□ -2.17
Ccdc28bQ8CEG5 Gm24750-201ENSMUST00000157843 104 ntBASIC1.51□□□□□ -2.17
Ccdc28bQ8CEG5 Gm23043-201ENSMUST00000157890 109 ntBASIC1.51□□□□□ -2.17
Ccdc28bQ8CEG5 Gm22989-201ENSMUST00000158313 86 ntBASIC1.51□□□□□ -2.17
Ccdc28bQ8CEG5 Gm29308-201ENSMUST00000188863 315 ntBASIC1.51□□□□□ -2.17
Ccdc28bQ8CEG5 Gm38183-201ENSMUST00000193189 205 ntBASIC1.51□□□□□ -2.17
Ccdc28bQ8CEG5 Gm37997-201ENSMUST00000193515 267 ntBASIC1.51□□□□□ -2.17
Ccdc28bQ8CEG5 Gm37693-201ENSMUST00000194562 234 ntBASIC1.51□□□□□ -2.17
Ccdc28bQ8CEG5 AC124182.1-201ENSMUST00000227091 321 ntBASIC1.51□□□□□ -2.17
Ccdc28bQ8CEG5 Gm22973-201ENSMUST00000083298 191 ntBASIC1.51□□□□□ -2.17
Ccdc28bQ8CEG5 Gm24762-201ENSMUST00000083689 104 ntBASIC1.51□□□□□ -2.17
Ccdc28bQ8CEG5 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC1.51□□□□□ -2.17
Ccdc28bQ8CEG5 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.51□□□□□ -2.17
Ccdc28bQ8CEG5 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.51□□□□□ -2.17
Ccdc28bQ8CEG5 Gm25538-201ENSMUST00000101943 107 ntBASIC1.5□□□□□ -2.17
Ccdc28bQ8CEG5 Gm13433-201ENSMUST00000121701 240 ntBASIC1.5□□□□□ -2.17
Ccdc28bQ8CEG5 Gm22482-201ENSMUST00000122563 359 ntBASIC1.5□□□□□ -2.17
Ccdc28bQ8CEG5 Gm22279-201ENSMUST00000157200 93 ntBASIC1.5□□□□□ -2.17
Ccdc28bQ8CEG5 Gm24262-201ENSMUST00000157431 144 ntBASIC1.5□□□□□ -2.17
Ccdc28bQ8CEG5 Gm24851-201ENSMUST00000158028 103 ntBASIC1.5□□□□□ -2.17
Ccdc28bQ8CEG5 Gm22665-201ENSMUST00000158720 275 ntBASIC1.5□□□□□ -2.17
Ccdc28bQ8CEG5 Mir3086-201ENSMUST00000175072 87 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms