Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Nup88Q8CEC0 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.61□□□□□ -2.15
Nup88Q8CEC0 Gm44959-201ENSMUST00000209127 231 ntBASIC1.61□□□□□ -2.15
Nup88Q8CEC0 AC159896.1-201ENSMUST00000215264 215 ntBASIC1.61□□□□□ -2.15
Nup88Q8CEC0 Gm22421-201ENSMUST00000083058 107 ntBASIC1.61□□□□□ -2.15
Nup88Q8CEC0 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.6□□□□□ -2.15
Nup88Q8CEC0 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.6□□□□□ -2.15
Nup88Q8CEC0 Gm26082-201ENSMUST00000104070 127 ntBASIC1.6□□□□□ -2.15
Nup88Q8CEC0 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC1.6□□□□□ -2.15
Nup88Q8CEC0 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC1.6□□□□□ -2.15
Nup88Q8CEC0 Gm28921-201ENSMUST00000190219 378 ntBASIC1.6□□□□□ -2.15
Nup88Q8CEC0 Gm33866-201ENSMUST00000196911 289 ntBASIC1.6□□□□□ -2.15
Nup88Q8CEC0 AC132615.1-201ENSMUST00000213873 255 ntBASIC1.6□□□□□ -2.15
Nup88Q8CEC0 Gm23451-201ENSMUST00000083328 122 ntBASIC1.6□□□□□ -2.15
Nup88Q8CEC0 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.6□□□□□ -2.15
Nup88Q8CEC0 AC164297.1-201ENSMUST00000224484 1561 ntBASIC1.59□□□□□ -2.15
Nup88Q8CEC0 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC1.59□□□□□ -2.15
Nup88Q8CEC0 Gm25397-201ENSMUST00000176951 92 ntBASIC1.59□□□□□ -2.15
Nup88Q8CEC0 Gm22450-201ENSMUST00000179641 107 ntBASIC1.59□□□□□ -2.15
Nup88Q8CEC0 Gm25473-201ENSMUST00000180191 107 ntBASIC1.59□□□□□ -2.15
Nup88Q8CEC0 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC1.59□□□□□ -2.15
Nup88Q8CEC0 Mir7039-201ENSMUST00000183852 85 ntBASIC1.59□□□□□ -2.15
Nup88Q8CEC0 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC1.59□□□□□ -2.15
Nup88Q8CEC0 AC125374.2-201ENSMUST00000214278 162 ntBASIC1.59□□□□□ -2.15
Nup88Q8CEC0 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.59□□□□□ -2.15
Nup88Q8CEC0 Gm24856-201ENSMUST00000082809 107 ntBASIC1.59□□□□□ -2.15
Nup88Q8CEC0 Gm22571-201ENSMUST00000082984 70 ntBASIC1.59□□□□□ -2.15
Nup88Q8CEC0 Gm26071-201ENSMUST00000083261 107 ntBASIC1.59□□□□□ -2.15
Nup88Q8CEC0 Gm24453-201ENSMUST00000083346 76 ntBASIC1.59□□□□□ -2.15
Nup88Q8CEC0 Gm24521-201ENSMUST00000083958 107 ntBASIC1.59□□□□□ -2.15
Nup88Q8CEC0 Mir343-201ENSMUST00000102360 75 ntBASIC1.58□□□□□ -2.16
Nup88Q8CEC0 Gm24595-201ENSMUST00000122501 110 ntBASIC1.58□□□□□ -2.16
Nup88Q8CEC0 Gm23101-201ENSMUST00000157550 137 ntBASIC1.58□□□□□ -2.16
Nup88Q8CEC0 Gm25664-201ENSMUST00000157697 107 ntBASIC1.58□□□□□ -2.16
Nup88Q8CEC0 Gm22097-201ENSMUST00000157929 278 ntBASIC1.58□□□□□ -2.16
Nup88Q8CEC0 Gm23581-201ENSMUST00000158531 63 ntBASIC1.58□□□□□ -2.16
Nup88Q8CEC0 Mir8119-201ENSMUST00000183371 129 ntBASIC1.58□□□□□ -2.16
Nup88Q8CEC0 Gm28409-201ENSMUST00000187064 103 ntBASIC1.58□□□□□ -2.16
Nup88Q8CEC0 Gm29140-201ENSMUST00000190187 476 ntBASIC1.58□□□□□ -2.16
Nup88Q8CEC0 Gm34139-201ENSMUST00000196166 294 ntBASIC1.58□□□□□ -2.16
Nup88Q8CEC0 Mir6962-201ENSMUST00000199512 63 ntBASIC1.58□□□□□ -2.16
Nup88Q8CEC0 AC157476.1-201ENSMUST00000215555 169 ntBASIC1.58□□□□□ -2.16
Nup88Q8CEC0 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.58□□□□□ -2.16
Nup88Q8CEC0 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.58□□□□□ -2.16
Nup88Q8CEC0 Gm14917-201ENSMUST00000118872 2105 ntBASIC1.57□□□□□ -2.16
Nup88Q8CEC0 Gm21064-202ENSMUST00000190583 278 ntBASIC1.57□□□□□ -2.16
Nup88Q8CEC0 Gm6105-201ENSMUST00000200580 624 ntBASIC1.57□□□□□ -2.16
Nup88Q8CEC0 Mir653-201ENSMUST00000102402 85 ntBASIC1.56□□□□□ -2.16
Nup88Q8CEC0 Mir875-201ENSMUST00000104698 78 ntBASIC1.56□□□□□ -2.16
Nup88Q8CEC0 Gm15214-201ENSMUST00000122155 470 ntBASIC1.56□□□□□ -2.16
Nup88Q8CEC0 Gm22228-201ENSMUST00000157364 101 ntBASIC1.56□□□□□ -2.16
Nup88Q8CEC0 Gm25615-201ENSMUST00000177836 94 ntBASIC1.56□□□□□ -2.16
Nup88Q8CEC0 Mir6240-201ENSMUST00000184281 117 ntBASIC1.56□□□□□ -2.16
Nup88Q8CEC0 Gm23679-201ENSMUST00000083161 119 ntBASIC1.56□□□□□ -2.16
Nup88Q8CEC0 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC1.55□□□□□ -2.16
Nup88Q8CEC0 Gm23194-201ENSMUST00000158813 105 ntBASIC1.55□□□□□ -2.16
Nup88Q8CEC0 Gm25069-201ENSMUST00000175238 86 ntBASIC1.55□□□□□ -2.16
Nup88Q8CEC0 Mir3968-201ENSMUST00000175355 100 ntBASIC1.55□□□□□ -2.16
Nup88Q8CEC0 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Nup88Q8CEC0 Gm29490-201ENSMUST00000190923 342 ntBASIC1.55□□□□□ -2.16
Nup88Q8CEC0 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Nup88Q8CEC0 Gm12309-201ENSMUST00000119889 182 ntBASIC1.54□□□□□ -2.16
Nup88Q8CEC0 Gm25825-201ENSMUST00000157091 124 ntBASIC1.54□□□□□ -2.16
Nup88Q8CEC0 Gm25024-201ENSMUST00000179667 104 ntBASIC1.54□□□□□ -2.16
Nup88Q8CEC0 Gm23571-201ENSMUST00000180073 127 ntBASIC1.54□□□□□ -2.16
Nup88Q8CEC0 Mir6540-201ENSMUST00000184886 108 ntBASIC1.54□□□□□ -2.16
Nup88Q8CEC0 Gm44977-201ENSMUST00000205283 420 ntBASIC1.54□□□□□ -2.16
Nup88Q8CEC0 Gm25038-201ENSMUST00000082928 130 ntBASIC1.54□□□□□ -2.16
Nup88Q8CEC0 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Nup88Q8CEC0 Mir544-201ENSMUST00000103813 78 ntBASIC1.53□□□□□ -2.16
Nup88Q8CEC0 Gm22784-201ENSMUST00000104088 132 ntBASIC1.53□□□□□ -2.16
Nup88Q8CEC0 Gm22101-201ENSMUST00000157928 103 ntBASIC1.53□□□□□ -2.16
Nup88Q8CEC0 Gm26287-201ENSMUST00000158887 81 ntBASIC1.53□□□□□ -2.16
Nup88Q8CEC0 Gm2962-201ENSMUST00000159266 336 ntBASIC1.53□□□□□ -2.16
Nup88Q8CEC0 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC1.53□□□□□ -2.16
Nup88Q8CEC0 Gm11388-201ENSMUST00000120908 159 ntBASIC1.52□□□□□ -2.17
Nup88Q8CEC0 n-R5s188-201ENSMUST00000122646 105 ntBASIC1.52□□□□□ -2.17
Nup88Q8CEC0 Gm24909-201ENSMUST00000157290 280 ntBASIC1.52□□□□□ -2.17
Nup88Q8CEC0 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC1.52□□□□□ -2.17
Nup88Q8CEC0 Gm25697-201ENSMUST00000082902 98 ntBASIC1.52□□□□□ -2.17
Nup88Q8CEC0 Gm24252-201ENSMUST00000083700 132 ntBASIC1.52□□□□□ -2.17
Nup88Q8CEC0 Gm23705-201ENSMUST00000104370 130 ntBASIC1.51□□□□□ -2.17
Nup88Q8CEC0 Gm22673-201ENSMUST00000104415 131 ntBASIC1.51□□□□□ -2.17
Nup88Q8CEC0 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.51□□□□□ -2.17
Nup88Q8CEC0 Mir3471-1-201ENSMUST00000175139 131 ntBASIC1.51□□□□□ -2.17
Nup88Q8CEC0 Gm24154-201ENSMUST00000175261 130 ntBASIC1.51□□□□□ -2.17
Nup88Q8CEC0 Gm44325-201ENSMUST00000196757 77 ntBASIC1.51□□□□□ -2.17
Nup88Q8CEC0 Gm43563-201ENSMUST00000196761 198 ntBASIC1.51□□□□□ -2.17
Nup88Q8CEC0 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC1.51□□□□□ -2.17
Nup88Q8CEC0 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC1.51□□□□□ -2.17
Nup88Q8CEC0 Gm24423-201ENSMUST00000101982 106 ntBASIC1.5□□□□□ -2.17
Nup88Q8CEC0 Gm24865-201ENSMUST00000103246 96 ntBASIC1.5□□□□□ -2.17
Nup88Q8CEC0 Gm12797-201ENSMUST00000118645 273 ntBASIC1.5□□□□□ -2.17
Nup88Q8CEC0 Gm15379-201ENSMUST00000121224 648 ntBASIC1.5□□□□□ -2.17
Nup88Q8CEC0 Gm13560-201ENSMUST00000121865 329 ntBASIC1.5□□□□□ -2.17
Nup88Q8CEC0 Gm26038-201ENSMUST00000158151 106 ntBASIC1.5□□□□□ -2.17
Nup88Q8CEC0 Gm38019-201ENSMUST00000195133 380 ntBASIC1.5□□□□□ -2.17
Nup88Q8CEC0 AC124182.1-201ENSMUST00000227091 321 ntBASIC1.5□□□□□ -2.17
Nup88Q8CEC0 Gm22287-201ENSMUST00000083197 107 ntBASIC1.5□□□□□ -2.17
Nup88Q8CEC0 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 134.5 ms