Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Gm23854-201ENSMUST00000158378 108 ntBASIC1.78□□□□□ -2.12
Atg4aQ8C9S8 Gm44853-201ENSMUST00000209070 250 ntBASIC1.78□□□□□ -2.12
Atg4aQ8C9S8 AC154636.2-201ENSMUST00000222538 161 ntBASIC1.78□□□□□ -2.12
Atg4aQ8C9S8 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC1.78□□□□□ -2.12
Atg4aQ8C9S8 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.78□□□□□ -2.12
Atg4aQ8C9S8 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Atg4aQ8C9S8 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
Atg4aQ8C9S8 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.78□□□□□ -2.13
Atg4aQ8C9S8 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.77□□□□□ -2.13
Atg4aQ8C9S8 Gm25316-201ENSMUST00000116826 118 ntBASIC1.77□□□□□ -2.13
Atg4aQ8C9S8 Gm22768-201ENSMUST00000158366 153 ntBASIC1.77□□□□□ -2.13
Atg4aQ8C9S8 Gm25935-201ENSMUST00000178746 107 ntBASIC1.77□□□□□ -2.13
Atg4aQ8C9S8 Gm22259-201ENSMUST00000178926 107 ntBASIC1.77□□□□□ -2.13
Atg4aQ8C9S8 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC1.77□□□□□ -2.13
Atg4aQ8C9S8 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC1.77□□□□□ -2.13
Atg4aQ8C9S8 Gm33866-201ENSMUST00000196911 289 ntBASIC1.77□□□□□ -2.13
Atg4aQ8C9S8 Gm45508-201ENSMUST00000209298 299 ntBASIC1.77□□□□□ -2.13
Atg4aQ8C9S8 Mir301-201ENSMUST00000083655 86 ntBASIC1.77□□□□□ -2.13
Atg4aQ8C9S8 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Atg4aQ8C9S8 Gm12080-201ENSMUST00000119821 1883 ntBASIC1.77□□□□□ -2.13
Atg4aQ8C9S8 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Atg4aQ8C9S8 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
Atg4aQ8C9S8 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
Atg4aQ8C9S8 Gm15214-201ENSMUST00000122155 470 ntBASIC1.76□□□□□ -2.13
Atg4aQ8C9S8 Gm23670-201ENSMUST00000157469 119 ntBASIC1.76□□□□□ -2.13
Atg4aQ8C9S8 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.76□□□□□ -2.13
Atg4aQ8C9S8 Mir6388-201ENSMUST00000184417 75 ntBASIC1.76□□□□□ -2.13
Atg4aQ8C9S8 Snord43-201ENSMUST00000199549 108 ntBASIC1.76□□□□□ -2.13
Atg4aQ8C9S8 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.76□□□□□ -2.13
Atg4aQ8C9S8 Gm16976-205ENSMUST00000227324 226 ntBASIC1.76□□□□□ -2.13
Atg4aQ8C9S8 AC127371.3-201ENSMUST00000228129 415 ntBASIC1.76□□□□□ -2.13
Atg4aQ8C9S8 Gm25410-201ENSMUST00000083758 137 ntBASIC1.76□□□□□ -2.13
Atg4aQ8C9S8 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Atg4aQ8C9S8 Gm13588-201ENSMUST00000120026 135 ntBASIC1.75□□□□□ -2.13
Atg4aQ8C9S8 Gm13801-201ENSMUST00000120750 160 ntBASIC1.75□□□□□ -2.13
Atg4aQ8C9S8 Gm14775-201ENSMUST00000122089 310 ntBASIC1.75□□□□□ -2.13
Atg4aQ8C9S8 Gm24595-201ENSMUST00000122501 110 ntBASIC1.75□□□□□ -2.13
Atg4aQ8C9S8 Gm25783-201ENSMUST00000122525 190 ntBASIC1.75□□□□□ -2.13
Atg4aQ8C9S8 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC1.75□□□□□ -2.13
Atg4aQ8C9S8 Gm26482-201ENSMUST00000158015 62 ntBASIC1.75□□□□□ -2.13
Atg4aQ8C9S8 Gm23194-201ENSMUST00000158813 105 ntBASIC1.75□□□□□ -2.13
Atg4aQ8C9S8 Gm25831-201ENSMUST00000158924 163 ntBASIC1.75□□□□□ -2.13
Atg4aQ8C9S8 Gm24638-201ENSMUST00000179807 132 ntBASIC1.75□□□□□ -2.13
Atg4aQ8C9S8 Mir7050-201ENSMUST00000184636 60 ntBASIC1.75□□□□□ -2.13
Atg4aQ8C9S8 Gm37746-201ENSMUST00000193249 198 ntBASIC1.75□□□□□ -2.13
Atg4aQ8C9S8 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC1.75□□□□□ -2.13
Atg4aQ8C9S8 Gm5010-201ENSMUST00000213131 260 ntBASIC1.75□□□□□ -2.13
Atg4aQ8C9S8 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC1.75□□□□□ -2.13
Atg4aQ8C9S8 AC122242.1-201ENSMUST00000224650 304 ntBASIC1.75□□□□□ -2.13
Atg4aQ8C9S8 Gm25634-201ENSMUST00000082667 105 ntBASIC1.75□□□□□ -2.13
Atg4aQ8C9S8 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.75□□□□□ -2.13
Atg4aQ8C9S8 Gm25832-201ENSMUST00000104140 130 ntBASIC1.74□□□□□ -2.13
Atg4aQ8C9S8 Mir293-201ENSMUST00000104841 80 ntBASIC1.74□□□□□ -2.13
Atg4aQ8C9S8 Gm13560-201ENSMUST00000121865 329 ntBASIC1.74□□□□□ -2.13
Atg4aQ8C9S8 Gm23390-201ENSMUST00000157393 106 ntBASIC1.74□□□□□ -2.13
Atg4aQ8C9S8 Gm22603-201ENSMUST00000157603 96 ntBASIC1.74□□□□□ -2.13
Atg4aQ8C9S8 Gm22553-201ENSMUST00000157797 295 ntBASIC1.74□□□□□ -2.13
Atg4aQ8C9S8 Gm24851-201ENSMUST00000158028 103 ntBASIC1.74□□□□□ -2.13
Atg4aQ8C9S8 Mir3086-201ENSMUST00000175072 87 ntBASIC1.74□□□□□ -2.13
Atg4aQ8C9S8 Gm25958-201ENSMUST00000175114 71 ntBASIC1.74□□□□□ -2.13
Atg4aQ8C9S8 Gm37693-201ENSMUST00000194562 234 ntBASIC1.74□□□□□ -2.13
Atg4aQ8C9S8 Gm45116-201ENSMUST00000207392 275 ntBASIC1.74□□□□□ -2.13
Atg4aQ8C9S8 Mir384-201ENSMUST00000083565 88 ntBASIC1.74□□□□□ -2.13
Atg4aQ8C9S8 Mir146-201ENSMUST00000083667 65 ntBASIC1.74□□□□□ -2.13
Atg4aQ8C9S8 Mir151-201ENSMUST00000083678 68 ntBASIC1.74□□□□□ -2.13
Atg4aQ8C9S8 Gm14882-201ENSMUST00000117216 218 ntBASIC1.73□□□□□ -2.13
Atg4aQ8C9S8 Gm15281-201ENSMUST00000125181 351 ntBASIC1.73□□□□□ -2.13
Atg4aQ8C9S8 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC1.73□□□□□ -2.13
Atg4aQ8C9S8 Gm26279-201ENSMUST00000157095 102 ntBASIC1.73□□□□□ -2.13
Atg4aQ8C9S8 Gm23665-201ENSMUST00000158054 62 ntBASIC1.73□□□□□ -2.13
Atg4aQ8C9S8 Gm22075-201ENSMUST00000158599 192 ntBASIC1.73□□□□□ -2.13
Atg4aQ8C9S8 Gm25834-201ENSMUST00000158916 101 ntBASIC1.73□□□□□ -2.13
Atg4aQ8C9S8 AC098718.1-201ENSMUST00000226166 175 ntBASIC1.73□□□□□ -2.13
Atg4aQ8C9S8 Gm25357-201ENSMUST00000082745 72 ntBASIC1.73□□□□□ -2.13
Atg4aQ8C9S8 Mir107-201ENSMUST00000083660 87 ntBASIC1.73□□□□□ -2.13
Atg4aQ8C9S8 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.72□□□□□ -2.13
Atg4aQ8C9S8 Gm20477-201ENSMUST00000174028 280 ntBASIC1.72□□□□□ -2.13
Atg4aQ8C9S8 Gm25994-201ENSMUST00000175392 101 ntBASIC1.72□□□□□ -2.13
Atg4aQ8C9S8 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.72□□□□□ -2.13
Atg4aQ8C9S8 Gm29014-201ENSMUST00000191422 326 ntBASIC1.72□□□□□ -2.13
Atg4aQ8C9S8 Gm44962-201ENSMUST00000206460 279 ntBASIC1.72□□□□□ -2.13
Atg4aQ8C9S8 AC120540.2-201ENSMUST00000221716 387 ntBASIC1.72□□□□□ -2.13
Atg4aQ8C9S8 Gm25142-201ENSMUST00000082698 107 ntBASIC1.72□□□□□ -2.13
Atg4aQ8C9S8 Snora33-201ENSMUST00000093556 129 ntBASIC1.72□□□□□ -2.13
Atg4aQ8C9S8 Gm22750-201ENSMUST00000102076 103 ntBASIC1.71□□□□□ -2.14
Atg4aQ8C9S8 Gm25377-201ENSMUST00000104334 129 ntBASIC1.71□□□□□ -2.14
Atg4aQ8C9S8 Gm24895-201ENSMUST00000122742 74 ntBASIC1.71□□□□□ -2.14
Atg4aQ8C9S8 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC1.71□□□□□ -2.14
Atg4aQ8C9S8 Mir1949-201ENSMUST00000157434 141 ntBASIC1.71□□□□□ -2.14
Atg4aQ8C9S8 Gm23584-201ENSMUST00000157655 129 ntBASIC1.71□□□□□ -2.14
Atg4aQ8C9S8 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC1.71□□□□□ -2.14
Atg4aQ8C9S8 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.71□□□□□ -2.14
Atg4aQ8C9S8 Gm24165-201ENSMUST00000082718 128 ntBASIC1.71□□□□□ -2.14
Atg4aQ8C9S8 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Atg4aQ8C9S8 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Atg4aQ8C9S8 Gm12449-201ENSMUST00000117572 234 ntBASIC1.7□□□□□ -2.14
Atg4aQ8C9S8 Gm25825-201ENSMUST00000157091 124 ntBASIC1.7□□□□□ -2.14
Atg4aQ8C9S8 Gm25658-201ENSMUST00000158472 128 ntBASIC1.7□□□□□ -2.14
Atg4aQ8C9S8 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.7□□□□□ -2.14
Atg4aQ8C9S8 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms