Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Mir101a-201ENSMUST00000083517 83 ntBASIC0.3□□□□□ -2.36
Trub1Q8C0D0 Mir34a-201ENSMUST00000083559 102 ntBASIC0.3□□□□□ -2.36
Trub1Q8C0D0 Mir32-201ENSMUST00000083610 70 ntBASIC0.3□□□□□ -2.36
Trub1Q8C0D0 Mir767-201ENSMUST00000103256 107 ntBASIC0.29□□□□□ -2.36
Trub1Q8C0D0 Gm23321-201ENSMUST00000104465 126 ntBASIC0.29□□□□□ -2.36
Trub1Q8C0D0 Mir880-201ENSMUST00000104809 78 ntBASIC0.29□□□□□ -2.36
Trub1Q8C0D0 Gm14536-201ENSMUST00000118324 138 ntBASIC0.29□□□□□ -2.36
Trub1Q8C0D0 Gm15027-201ENSMUST00000120922 138 ntBASIC0.29□□□□□ -2.36
Trub1Q8C0D0 Gm22215-201ENSMUST00000157558 96 ntBASIC0.29□□□□□ -2.36
Trub1Q8C0D0 Mir1931-201ENSMUST00000158589 119 ntBASIC0.29□□□□□ -2.36
Trub1Q8C0D0 Gm22200-201ENSMUST00000158614 67 ntBASIC0.29□□□□□ -2.36
Trub1Q8C0D0 Gm28256-201ENSMUST00000188953 139 ntBASIC0.29□□□□□ -2.36
Trub1Q8C0D0 Gm28559-201ENSMUST00000190532 139 ntBASIC0.29□□□□□ -2.36
Trub1Q8C0D0 Gm37997-201ENSMUST00000193515 267 ntBASIC0.29□□□□□ -2.36
Trub1Q8C0D0 Gm44488-201ENSMUST00000199467 119 ntBASIC0.29□□□□□ -2.36
Trub1Q8C0D0 AC104832.1-201ENSMUST00000222938 550 ntBASIC0.29□□□□□ -2.36
Trub1Q8C0D0 Gm25138-201ENSMUST00000083248 136 ntBASIC0.29□□□□□ -2.36
Trub1Q8C0D0 Gm6272-201ENSMUST00000121256 171 ntBASIC0.28□□□□□ -2.36
Trub1Q8C0D0 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC0.28□□□□□ -2.36
Trub1Q8C0D0 Gm26022-201ENSMUST00000158663 108 ntBASIC0.28□□□□□ -2.36
Trub1Q8C0D0 Gm24818-201ENSMUST00000175093 161 ntBASIC0.28□□□□□ -2.36
Trub1Q8C0D0 Gm22914-201ENSMUST00000175195 77 ntBASIC0.28□□□□□ -2.36
Trub1Q8C0D0 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC0.28□□□□□ -2.36
Trub1Q8C0D0 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC0.28□□□□□ -2.36
Trub1Q8C0D0 Gm25855-201ENSMUST00000082787 72 ntBASIC0.28□□□□□ -2.36
Trub1Q8C0D0 Gm22786-201ENSMUST00000104086 122 ntBASIC0.27□□□□□ -2.37
Trub1Q8C0D0 Gm13720-201ENSMUST00000120741 196 ntBASIC0.27□□□□□ -2.37
Trub1Q8C0D0 Gm14761-201ENSMUST00000121363 262 ntBASIC0.27□□□□□ -2.37
Trub1Q8C0D0 Gm23191-201ENSMUST00000179147 107 ntBASIC0.27□□□□□ -2.37
Trub1Q8C0D0 Mir6389-201ENSMUST00000183661 102 ntBASIC0.27□□□□□ -2.37
Trub1Q8C0D0 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC0.27□□□□□ -2.37
Trub1Q8C0D0 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
Trub1Q8C0D0 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.27□□□□□ -2.37
Trub1Q8C0D0 AC124182.1-201ENSMUST00000227091 321 ntBASIC0.27□□□□□ -2.37
Trub1Q8C0D0 AC154484.1-201ENSMUST00000227311 771 ntBASIC0.27□□□□□ -2.37
Trub1Q8C0D0 Gm23627-201ENSMUST00000082459 107 ntBASIC0.27□□□□□ -2.37
Trub1Q8C0D0 Gm22502-201ENSMUST00000082488 107 ntBASIC0.27□□□□□ -2.37
Trub1Q8C0D0 Gm22977-201ENSMUST00000082615 107 ntBASIC0.27□□□□□ -2.37
Trub1Q8C0D0 Gm24149-201ENSMUST00000082757 107 ntBASIC0.27□□□□□ -2.37
Trub1Q8C0D0 Gm24037-201ENSMUST00000082871 180 ntBASIC0.27□□□□□ -2.37
Trub1Q8C0D0 Gm26326-201ENSMUST00000083070 129 ntBASIC0.27□□□□□ -2.37
Trub1Q8C0D0 Rny1-201ENSMUST00000083767 112 ntBASIC0.27□□□□□ -2.37
Trub1Q8C0D0 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC0.27□□□□□ -2.37
Trub1Q8C0D0 Gm14946-201ENSMUST00000119859 296 ntBASIC0.26□□□□□ -2.37
Trub1Q8C0D0 Gm22706-201ENSMUST00000157907 112 ntBASIC0.26□□□□□ -2.37
Trub1Q8C0D0 Mir1951-201ENSMUST00000157981 89 ntBASIC0.26□□□□□ -2.37
Trub1Q8C0D0 Gm23182-201ENSMUST00000158688 135 ntBASIC0.26□□□□□ -2.37
Trub1Q8C0D0 Gm25838-201ENSMUST00000158920 120 ntBASIC0.26□□□□□ -2.37
Trub1Q8C0D0 Gm44473-201ENSMUST00000204039 152 ntBASIC0.26□□□□□ -2.37
Trub1Q8C0D0 Gm44811-201ENSMUST00000209120 228 ntBASIC0.26□□□□□ -2.37
Trub1Q8C0D0 Gm23625-201ENSMUST00000082457 100 ntBASIC0.26□□□□□ -2.37
Trub1Q8C0D0 Gm24042-201ENSMUST00000083114 103 ntBASIC0.26□□□□□ -2.37
Trub1Q8C0D0 Gm3867-201ENSMUST00000086108 279 ntBASIC0.26□□□□□ -2.37
Trub1Q8C0D0 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
Trub1Q8C0D0 Gm13560-201ENSMUST00000121865 329 ntBASIC0.25□□□□□ -2.37
Trub1Q8C0D0 Gm25393-201ENSMUST00000157336 285 ntBASIC0.25□□□□□ -2.37
Trub1Q8C0D0 Gm24476-201ENSMUST00000157437 131 ntBASIC0.25□□□□□ -2.37
Trub1Q8C0D0 Gm24963-201ENSMUST00000157916 144 ntBASIC0.25□□□□□ -2.37
Trub1Q8C0D0 Gm26116-201ENSMUST00000175600 77 ntBASIC0.25□□□□□ -2.37
Trub1Q8C0D0 Gm27540-201ENSMUST00000184950 187 ntBASIC0.25□□□□□ -2.37
Trub1Q8C0D0 Mir500-201ENSMUST00000093600 92 ntBASIC0.25□□□□□ -2.37
Trub1Q8C0D0 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.25□□□□□ -2.37
Trub1Q8C0D0 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.25□□□□□ -2.37
Trub1Q8C0D0 Gm11522-201ENSMUST00000120533 176 ntBASIC0.24□□□□□ -2.37
Trub1Q8C0D0 Gm24440-201ENSMUST00000157236 63 ntBASIC0.24□□□□□ -2.37
Trub1Q8C0D0 Gm23759-201ENSMUST00000158351 268 ntBASIC0.24□□□□□ -2.37
Trub1Q8C0D0 Gm24512-201ENSMUST00000174963 65 ntBASIC0.24□□□□□ -2.37
Trub1Q8C0D0 Gm27755-201ENSMUST00000184623 132 ntBASIC0.24□□□□□ -2.37
Trub1Q8C0D0 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC0.24□□□□□ -2.37
Trub1Q8C0D0 Gm44063-201ENSMUST00000203307 376 ntBASIC0.24□□□□□ -2.37
Trub1Q8C0D0 Gm43884-201ENSMUST00000204251 559 ntBASIC0.24□□□□□ -2.37
Trub1Q8C0D0 CT485612.2-201ENSMUST00000223014 151 ntBASIC0.24□□□□□ -2.37
Trub1Q8C0D0 Gm30155-201ENSMUST00000223458 339 ntBASIC0.24□□□□□ -2.37
Trub1Q8C0D0 Gm24342-201ENSMUST00000103907 104 ntBASIC0.23□□□□□ -2.37
Trub1Q8C0D0 Gm17132-201ENSMUST00000109542 1158 ntBASIC0.23□□□□□ -2.37
Trub1Q8C0D0 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
Trub1Q8C0D0 Gm23113-201ENSMUST00000158477 99 ntBASIC0.23□□□□□ -2.37
Trub1Q8C0D0 Gm27717-201ENSMUST00000183933 151 ntBASIC0.23□□□□□ -2.37
Trub1Q8C0D0 Mir8116-201ENSMUST00000184134 97 ntBASIC0.23□□□□□ -2.37
Trub1Q8C0D0 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC0.23□□□□□ -2.37
Trub1Q8C0D0 Gm6105-201ENSMUST00000200580 624 ntBASIC0.23□□□□□ -2.37
Trub1Q8C0D0 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC0.23□□□□□ -2.37
Trub1Q8C0D0 Gm5023-201ENSMUST00000217442 587 ntBASIC0.23□□□□□ -2.37
Trub1Q8C0D0 AC165092.3-201ENSMUST00000223602 282 ntBASIC0.23□□□□□ -2.37
Trub1Q8C0D0 Gm24150-201ENSMUST00000082759 104 ntBASIC0.23□□□□□ -2.37
Trub1Q8C0D0 Gm25930-201ENSMUST00000082785 107 ntBASIC0.23□□□□□ -2.37
Trub1Q8C0D0 Gm25204-201ENSMUST00000082843 106 ntBASIC0.23□□□□□ -2.37
Trub1Q8C0D0 Gm23142-201ENSMUST00000101848 105 ntBASIC0.22□□□□□ -2.37
Trub1Q8C0D0 Gm26240-201ENSMUST00000101893 105 ntBASIC0.22□□□□□ -2.37
Trub1Q8C0D0 Gm24595-201ENSMUST00000122501 110 ntBASIC0.22□□□□□ -2.37
Trub1Q8C0D0 Gm23148-201ENSMUST00000180367 107 ntBASIC0.22□□□□□ -2.37
Trub1Q8C0D0 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC0.22□□□□□ -2.37
Trub1Q8C0D0 AC102369.1-201ENSMUST00000218415 373 ntBASIC0.22□□□□□ -2.37
Trub1Q8C0D0 Gm25258-201ENSMUST00000083049 107 ntBASIC0.22□□□□□ -2.37
Trub1Q8C0D0 Gm24616-201ENSMUST00000083274 139 ntBASIC0.22□□□□□ -2.37
Trub1Q8C0D0 Snord89-201ENSMUST00000104516 110 ntBASIC0.21□□□□□ -2.38
Trub1Q8C0D0 Gm13711-201ENSMUST00000119708 453 ntBASIC0.21□□□□□ -2.38
Trub1Q8C0D0 Gm6985-201ENSMUST00000121255 271 ntBASIC0.21□□□□□ -2.38
Trub1Q8C0D0 Gm12770-201ENSMUST00000121734 462 ntBASIC0.21□□□□□ -2.38
Trub1Q8C0D0 Gm25781-201ENSMUST00000122527 84 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 192.5 ms