Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm42719-201ENSMUST00000197393 355 ntBASIC3.18□□□□□ -1.9
Usp40Q8BWR4 Mir3068-202ENSMUST00000197755 79 ntBASIC3.18□□□□□ -1.9
Usp40Q8BWR4 Gm43381-201ENSMUST00000198553 165 ntBASIC3.18□□□□□ -1.9
Usp40Q8BWR4 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC3.18□□□□□ -1.9
Usp40Q8BWR4 AC141895.1-201ENSMUST00000218141 273 ntBASIC3.18□□□□□ -1.9
Usp40Q8BWR4 Gm23727-201ENSMUST00000083352 164 ntBASIC3.18□□□□□ -1.9
Usp40Q8BWR4 Mir201-201ENSMUST00000083470 66 ntBASIC3.18□□□□□ -1.9
Usp40Q8BWR4 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Usp40Q8BWR4 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Usp40Q8BWR4 Gm15303-201ENSMUST00000118676 2624 ntBASIC3.18□□□□□ -1.9
Usp40Q8BWR4 Gm22713-201ENSMUST00000116895 130 ntBASIC3.17□□□□□ -1.9
Usp40Q8BWR4 Gm22281-201ENSMUST00000157198 103 ntBASIC3.17□□□□□ -1.9
Usp40Q8BWR4 Gm23716-201ENSMUST00000157348 144 ntBASIC3.17□□□□□ -1.9
Usp40Q8BWR4 Gm25910-201ENSMUST00000157620 140 ntBASIC3.17□□□□□ -1.9
Usp40Q8BWR4 Gm23223-201ENSMUST00000158119 127 ntBASIC3.17□□□□□ -1.9
Usp40Q8BWR4 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC3.17□□□□□ -1.9
Usp40Q8BWR4 Gm21064-202ENSMUST00000190583 278 ntBASIC3.17□□□□□ -1.9
Usp40Q8BWR4 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC3.17□□□□□ -1.9
Usp40Q8BWR4 Gm44976-201ENSMUST00000205543 261 ntBASIC3.17□□□□□ -1.9
Usp40Q8BWR4 Gm25628-201ENSMUST00000084002 105 ntBASIC3.17□□□□□ -1.9
Usp40Q8BWR4 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC3.17□□□□□ -1.9
Usp40Q8BWR4 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC3.17□□□□□ -1.9
Usp40Q8BWR4 Gm43046-201ENSMUST00000198771 2451 ntBASIC3.17□□□□□ -1.9
Usp40Q8BWR4 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Usp40Q8BWR4 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Usp40Q8BWR4 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Usp40Q8BWR4 Gm45178-201ENSMUST00000207744 4110 ntBASIC3.17□□□□□ -1.9
Usp40Q8BWR4 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Usp40Q8BWR4 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.16□□□□□ -1.9
Usp40Q8BWR4 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Usp40Q8BWR4 Gm23202-201ENSMUST00000104376 129 ntBASIC3.16□□□□□ -1.9
Usp40Q8BWR4 Gm26341-201ENSMUST00000104561 134 ntBASIC3.16□□□□□ -1.9
Usp40Q8BWR4 Mir669d-201ENSMUST00000104644 121 ntBASIC3.16□□□□□ -1.9
Usp40Q8BWR4 Gm13913-201ENSMUST00000121126 260 ntBASIC3.16□□□□□ -1.9
Usp40Q8BWR4 Gm23599-201ENSMUST00000157261 251 ntBASIC3.16□□□□□ -1.9
Usp40Q8BWR4 Gm27792-201ENSMUST00000184031 115 ntBASIC3.16□□□□□ -1.9
Usp40Q8BWR4 CT009696.1-201ENSMUST00000215745 256 ntBASIC3.16□□□□□ -1.9
Usp40Q8BWR4 CT030687.1-201ENSMUST00000221854 162 ntBASIC3.16□□□□□ -1.9
Usp40Q8BWR4 Gm16976-205ENSMUST00000227324 226 ntBASIC3.16□□□□□ -1.9
Usp40Q8BWR4 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Usp40Q8BWR4 Gm25094-201ENSMUST00000103992 131 ntBASIC3.15□□□□□ -1.91
Usp40Q8BWR4 Gm12941-201ENSMUST00000117934 220 ntBASIC3.15□□□□□ -1.91
Usp40Q8BWR4 Gm12013-201ENSMUST00000121971 155 ntBASIC3.15□□□□□ -1.91
Usp40Q8BWR4 Gm23476-201ENSMUST00000158881 274 ntBASIC3.15□□□□□ -1.91
Usp40Q8BWR4 Gm37428-201ENSMUST00000193886 137 ntBASIC3.15□□□□□ -1.91
Usp40Q8BWR4 Gm43626-201ENSMUST00000198575 162 ntBASIC3.15□□□□□ -1.91
Usp40Q8BWR4 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Usp40Q8BWR4 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Usp40Q8BWR4 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC3.14□□□□□ -1.91
Usp40Q8BWR4 Gm24582-201ENSMUST00000103967 103 ntBASIC3.14□□□□□ -1.91
Usp40Q8BWR4 Gm44489-201ENSMUST00000104619 97 ntBASIC3.14□□□□□ -1.91
Usp40Q8BWR4 Gm12513-201ENSMUST00000118617 352 ntBASIC3.14□□□□□ -1.91
Usp40Q8BWR4 Gm26253-201ENSMUST00000122493 103 ntBASIC3.14□□□□□ -1.91
Usp40Q8BWR4 Gm27396-201ENSMUST00000157708 58 ntBASIC3.14□□□□□ -1.91
Usp40Q8BWR4 Gm22729-201ENSMUST00000158088 129 ntBASIC3.14□□□□□ -1.91
Usp40Q8BWR4 Gm24388-201ENSMUST00000177872 107 ntBASIC3.14□□□□□ -1.91
Usp40Q8BWR4 Gm22264-201ENSMUST00000178200 107 ntBASIC3.14□□□□□ -1.91
Usp40Q8BWR4 Mir7226-201ENSMUST00000184953 60 ntBASIC3.14□□□□□ -1.91
Usp40Q8BWR4 Gm6060-201ENSMUST00000188671 251 ntBASIC3.14□□□□□ -1.91
Usp40Q8BWR4 Gm44358-201ENSMUST00000196301 98 ntBASIC3.14□□□□□ -1.91
Usp40Q8BWR4 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC3.14□□□□□ -1.91
Usp40Q8BWR4 CT030159.4-201ENSMUST00000221966 395 ntBASIC3.14□□□□□ -1.91
Usp40Q8BWR4 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
Usp40Q8BWR4 Gm24595-201ENSMUST00000122501 110 ntBASIC3.13□□□□□ -1.91
Usp40Q8BWR4 Gm22790-201ENSMUST00000157229 129 ntBASIC3.13□□□□□ -1.91
Usp40Q8BWR4 Gm44326-201ENSMUST00000198226 101 ntBASIC3.13□□□□□ -1.91
Usp40Q8BWR4 AC124524.1-201ENSMUST00000225833 181 ntBASIC3.13□□□□□ -1.91
Usp40Q8BWR4 Gm26493-201ENSMUST00000083155 136 ntBASIC3.13□□□□□ -1.91
Usp40Q8BWR4 Mir322-201ENSMUST00000083484 95 ntBASIC3.13□□□□□ -1.91
Usp40Q8BWR4 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC3.12□□□□□ -1.91
Usp40Q8BWR4 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Usp40Q8BWR4 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Usp40Q8BWR4 Snora36b-201ENSMUST00000104383 132 ntBASIC3.12□□□□□ -1.91
Usp40Q8BWR4 Gm15365-201ENSMUST00000122392 300 ntBASIC3.12□□□□□ -1.91
Usp40Q8BWR4 Gm24601-201ENSMUST00000157970 143 ntBASIC3.12□□□□□ -1.91
Usp40Q8BWR4 Gm23548-201ENSMUST00000158963 106 ntBASIC3.12□□□□□ -1.91
Usp40Q8BWR4 Gm38364-201ENSMUST00000191814 179 ntBASIC3.12□□□□□ -1.91
Usp40Q8BWR4 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC3.12□□□□□ -1.91
Usp40Q8BWR4 Gm25820-202ENSMUST00000197479 128 ntBASIC3.12□□□□□ -1.91
Usp40Q8BWR4 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC3.12□□□□□ -1.91
Usp40Q8BWR4 AC158598.1-201ENSMUST00000214349 3847 ntBASIC3.12□□□□□ -1.91
Usp40Q8BWR4 AC122194.1-201ENSMUST00000220549 293 ntBASIC3.12□□□□□ -1.91
Usp40Q8BWR4 Mir19b-2-201ENSMUST00000083539 84 ntBASIC3.12□□□□□ -1.91
Usp40Q8BWR4 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Usp40Q8BWR4 Gm43540-201ENSMUST00000196320 3848 ntBASIC3.11□□□□□ -1.91
Usp40Q8BWR4 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Usp40Q8BWR4 n-R5s164-201ENSMUST00000122664 112 ntBASIC3.11□□□□□ -1.91
Usp40Q8BWR4 Gm22228-201ENSMUST00000157364 101 ntBASIC3.11□□□□□ -1.91
Usp40Q8BWR4 Gm23559-201ENSMUST00000157824 103 ntBASIC3.11□□□□□ -1.91
Usp40Q8BWR4 Gm44564-201ENSMUST00000207985 180 ntBASIC3.11□□□□□ -1.91
Usp40Q8BWR4 Gm22738-201ENSMUST00000083440 147 ntBASIC3.11□□□□□ -1.91
Usp40Q8BWR4 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Usp40Q8BWR4 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Usp40Q8BWR4 Gm45558-201ENSMUST00000209384 1895 ntBASIC3.1□□□□□ -1.91
Usp40Q8BWR4 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC3.1□□□□□ -1.91
Usp40Q8BWR4 Gm25625-201ENSMUST00000157221 96 ntBASIC3.1□□□□□ -1.91
Usp40Q8BWR4 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Usp40Q8BWR4 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Usp40Q8BWR4 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC3.1□□□□□ -1.91
Usp40Q8BWR4 Ighv1-1-201ENSMUST00000194912 291 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 135.1 ms