Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm38050-201ENSMUST00000191904 238 ntBASIC0.8□□□□□ -2.28
Ccdc40Q8BI79 Gm37338-201ENSMUST00000191986 127 ntBASIC0.8□□□□□ -2.28
Ccdc40Q8BI79 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC0.8□□□□□ -2.28
Ccdc40Q8BI79 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC0.8□□□□□ -2.28
Ccdc40Q8BI79 Gm23492-201ENSMUST00000116837 115 ntBASIC0.79□□□□□ -2.28
Ccdc40Q8BI79 Gm14980-201ENSMUST00000121247 736 ntBASIC0.79□□□□□ -2.28
Ccdc40Q8BI79 Gm27365-201ENSMUST00000184041 177 ntBASIC0.79□□□□□ -2.28
Ccdc40Q8BI79 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC0.79□□□□□ -2.28
Ccdc40Q8BI79 Gm43898-201ENSMUST00000204456 424 ntBASIC0.79□□□□□ -2.28
Ccdc40Q8BI79 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.79□□□□□ -2.28
Ccdc40Q8BI79 Gm34783-201ENSMUST00000209159 303 ntBASIC0.79□□□□□ -2.28
Ccdc40Q8BI79 AC154994.1-201ENSMUST00000217395 302 ntBASIC0.79□□□□□ -2.28
Ccdc40Q8BI79 Gm18188-201ENSMUST00000219386 478 ntBASIC0.79□□□□□ -2.28
Ccdc40Q8BI79 Gm24043-201ENSMUST00000083108 116 ntBASIC0.79□□□□□ -2.28
Ccdc40Q8BI79 Gm25506-201ENSMUST00000104339 70 ntBASIC0.78□□□□□ -2.28
Ccdc40Q8BI79 Gm25781-201ENSMUST00000122527 84 ntBASIC0.78□□□□□ -2.28
Ccdc40Q8BI79 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
Ccdc40Q8BI79 Gm24747-201ENSMUST00000157835 87 ntBASIC0.78□□□□□ -2.28
Ccdc40Q8BI79 Gm22888-201ENSMUST00000158640 77 ntBASIC0.78□□□□□ -2.28
Ccdc40Q8BI79 Mir465d-201ENSMUST00000196314 58 ntBASIC0.78□□□□□ -2.28
Ccdc40Q8BI79 Gm44352-201ENSMUST00000196358 110 ntBASIC0.78□□□□□ -2.28
Ccdc40Q8BI79 Mir880-201ENSMUST00000104809 78 ntBASIC0.77□□□□□ -2.29
Ccdc40Q8BI79 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC0.77□□□□□ -2.29
Ccdc40Q8BI79 Gm23474-201ENSMUST00000158884 75 ntBASIC0.77□□□□□ -2.29
Ccdc40Q8BI79 Mir15a-201ENSMUST00000175266 84 ntBASIC0.77□□□□□ -2.29
Ccdc40Q8BI79 Gm20630-201ENSMUST00000177387 551 ntBASIC0.77□□□□□ -2.29
Ccdc40Q8BI79 Gm28927-201ENSMUST00000191528 272 ntBASIC0.77□□□□□ -2.29
Ccdc40Q8BI79 AC124182.1-201ENSMUST00000227091 321 ntBASIC0.77□□□□□ -2.29
Ccdc40Q8BI79 Gm14536-201ENSMUST00000118324 138 ntBASIC0.76□□□□□ -2.29
Ccdc40Q8BI79 Gm15027-201ENSMUST00000120922 138 ntBASIC0.76□□□□□ -2.29
Ccdc40Q8BI79 Gm24595-201ENSMUST00000122501 110 ntBASIC0.76□□□□□ -2.29
Ccdc40Q8BI79 Gm14298-201ENSMUST00000139032 237 ntBASIC0.76□□□□□ -2.29
Ccdc40Q8BI79 Gm16356-201ENSMUST00000143300 169 ntBASIC0.76□□□□□ -2.29
Ccdc40Q8BI79 Gm20391-201ENSMUST00000174722 106 ntBASIC0.76□□□□□ -2.29
Ccdc40Q8BI79 Gm23793-201ENSMUST00000179396 117 ntBASIC0.76□□□□□ -2.29
Ccdc40Q8BI79 Gm37763-201ENSMUST00000193445 120 ntBASIC0.76□□□□□ -2.29
Ccdc40Q8BI79 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
Ccdc40Q8BI79 Gm13560-201ENSMUST00000121865 329 ntBASIC0.75□□□□□ -2.29
Ccdc40Q8BI79 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.75□□□□□ -2.29
Ccdc40Q8BI79 Gm24504-201ENSMUST00000157679 100 ntBASIC0.75□□□□□ -2.29
Ccdc40Q8BI79 Gm25838-201ENSMUST00000158920 120 ntBASIC0.75□□□□□ -2.29
Ccdc40Q8BI79 Mir1954-201ENSMUST00000175595 86 ntBASIC0.75□□□□□ -2.29
Ccdc40Q8BI79 Gm7258-201ENSMUST00000179317 300 ntBASIC0.75□□□□□ -2.29
Ccdc40Q8BI79 Mir7093-201ENSMUST00000184195 101 ntBASIC0.75□□□□□ -2.29
Ccdc40Q8BI79 Gm6105-201ENSMUST00000200580 624 ntBASIC0.75□□□□□ -2.29
Ccdc40Q8BI79 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.75□□□□□ -2.29
Ccdc40Q8BI79 Rny3-201ENSMUST00000083011 102 ntBASIC0.75□□□□□ -2.29
Ccdc40Q8BI79 Mir101a-201ENSMUST00000083517 83 ntBASIC0.75□□□□□ -2.29
Ccdc40Q8BI79 Gm26107-201ENSMUST00000083972 107 ntBASIC0.75□□□□□ -2.29
Ccdc40Q8BI79 Gm12432-201ENSMUST00000119540 186 ntBASIC0.74□□□□□ -2.29
Ccdc40Q8BI79 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC0.74□□□□□ -2.29
Ccdc40Q8BI79 Gm25949-201ENSMUST00000175333 114 ntBASIC0.74□□□□□ -2.29
Ccdc40Q8BI79 Gm23714-201ENSMUST00000179259 105 ntBASIC0.74□□□□□ -2.29
Ccdc40Q8BI79 Mir7052-201ENSMUST00000184821 65 ntBASIC0.74□□□□□ -2.29
Ccdc40Q8BI79 Mir3535-201ENSMUST00000197651 147 ntBASIC0.74□□□□□ -2.29
Ccdc40Q8BI79 Mir216a-201ENSMUST00000083605 72 ntBASIC0.74□□□□□ -2.29
Ccdc40Q8BI79 Gm23039-201ENSMUST00000083870 161 ntBASIC0.74□□□□□ -2.29
Ccdc40Q8BI79 Gm25937-201ENSMUST00000083912 107 ntBASIC0.74□□□□□ -2.29
Ccdc40Q8BI79 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
Ccdc40Q8BI79 Gm24579-201ENSMUST00000103964 144 ntBASIC0.73□□□□□ -2.29
Ccdc40Q8BI79 Gm12647-201ENSMUST00000118977 265 ntBASIC0.73□□□□□ -2.29
Ccdc40Q8BI79 Gm13711-201ENSMUST00000119708 453 ntBASIC0.73□□□□□ -2.29
Ccdc40Q8BI79 Gm13518-201ENSMUST00000120018 233 ntBASIC0.73□□□□□ -2.29
Ccdc40Q8BI79 Gm23113-201ENSMUST00000158477 99 ntBASIC0.73□□□□□ -2.29
Ccdc40Q8BI79 Mir1961-201ENSMUST00000158643 112 ntBASIC0.73□□□□□ -2.29
Ccdc40Q8BI79 Mir3109-201ENSMUST00000175301 88 ntBASIC0.73□□□□□ -2.29
Ccdc40Q8BI79 Mir3968-201ENSMUST00000175355 100 ntBASIC0.73□□□□□ -2.29
Ccdc40Q8BI79 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC0.73□□□□□ -2.29
Ccdc40Q8BI79 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC0.73□□□□□ -2.29
Ccdc40Q8BI79 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC0.73□□□□□ -2.29
Ccdc40Q8BI79 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC0.73□□□□□ -2.29
Ccdc40Q8BI79 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC0.73□□□□□ -2.29
Ccdc40Q8BI79 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC0.73□□□□□ -2.29
Ccdc40Q8BI79 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC0.73□□□□□ -2.29
Ccdc40Q8BI79 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC0.73□□□□□ -2.29
Ccdc40Q8BI79 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC0.73□□□□□ -2.29
Ccdc40Q8BI79 Gm20923-201ENSMUST00000190009 319 ntBASIC0.73□□□□□ -2.29
Ccdc40Q8BI79 Gm28330-201ENSMUST00000190353 171 ntBASIC0.73□□□□□ -2.29
Ccdc40Q8BI79 Gm21088-201ENSMUST00000190875 316 ntBASIC0.73□□□□□ -2.29
Ccdc40Q8BI79 AC153526.1-201ENSMUST00000219750 190 ntBASIC0.73□□□□□ -2.29
Ccdc40Q8BI79 Gm24624-201ENSMUST00000082617 164 ntBASIC0.73□□□□□ -2.29
Ccdc40Q8BI79 Snord33-201ENSMUST00000083694 84 ntBASIC0.73□□□□□ -2.29
Ccdc40Q8BI79 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC0.72□□□□□ -2.29
Ccdc40Q8BI79 Gm24192-201ENSMUST00000157978 145 ntBASIC0.72□□□□□ -2.29
Ccdc40Q8BI79 Mir1931-201ENSMUST00000158589 119 ntBASIC0.72□□□□□ -2.29
Ccdc40Q8BI79 Gm23182-201ENSMUST00000158688 135 ntBASIC0.72□□□□□ -2.29
Ccdc40Q8BI79 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC0.72□□□□□ -2.29
Ccdc40Q8BI79 Gm28849-201ENSMUST00000188127 174 ntBASIC0.72□□□□□ -2.29
Ccdc40Q8BI79 CT009713.9-201ENSMUST00000223604 389 ntBASIC0.72□□□□□ -2.29
Ccdc40Q8BI79 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
Ccdc40Q8BI79 Mir654-201ENSMUST00000104787 84 ntBASIC0.71□□□□□ -2.3
Ccdc40Q8BI79 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
Ccdc40Q8BI79 Gm24909-201ENSMUST00000157290 280 ntBASIC0.71□□□□□ -2.3
Ccdc40Q8BI79 Gm22200-201ENSMUST00000158614 67 ntBASIC0.71□□□□□ -2.3
Ccdc40Q8BI79 Mir3079-201ENSMUST00000175428 90 ntBASIC0.71□□□□□ -2.3
Ccdc40Q8BI79 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC0.71□□□□□ -2.3
Ccdc40Q8BI79 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC0.71□□□□□ -2.3
Ccdc40Q8BI79 AC116589.4-201ENSMUST00000222390 216 ntBASIC0.71□□□□□ -2.3
Ccdc40Q8BI79 Snord42a-201ENSMUST00000082606 65 ntBASIC0.71□□□□□ -2.3
Ccdc40Q8BI79 Gm26301-201ENSMUST00000104813 95 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms