Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.19□□□□□ -2.44
Ttc28Q80XJ3 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC-0.19□□□□□ -2.44
Ttc28Q80XJ3 Mir96-201ENSMUST00000083652 106 ntBASIC-0.19□□□□□ -2.44
Ttc28Q80XJ3 Gm24593-201ENSMUST00000122507 106 ntBASIC-0.19□□□□□ -2.44
Ttc28Q80XJ3 Gm23777-201ENSMUST00000158994 259 ntBASIC-0.19□□□□□ -2.44
Ttc28Q80XJ3 Gm25361-201ENSMUST00000179358 76 ntBASIC-0.19□□□□□ -2.44
Ttc28Q80XJ3 Trav5d-2-201ENSMUST00000196107 275 ntBASIC-0.19□□□□□ -2.44
Ttc28Q80XJ3 Trav5n-2-201ENSMUST00000197136 275 ntBASIC-0.19□□□□□ -2.44
Ttc28Q80XJ3 Gm18971-201ENSMUST00000197240 374 ntBASIC-0.19□□□□□ -2.44
Ttc28Q80XJ3 AC164612.2-202ENSMUST00000216314 253 ntBASIC-0.19□□□□□ -2.44
Ttc28Q80XJ3 Gm26446-201ENSMUST00000082455 103 ntBASIC-0.19□□□□□ -2.44
Ttc28Q80XJ3 Gm26228-201ENSMUST00000082512 107 ntBASIC-0.19□□□□□ -2.44
Ttc28Q80XJ3 Gm22283-201ENSMUST00000082556 161 ntBASIC-0.19□□□□□ -2.44
Ttc28Q80XJ3 Gm23509-201ENSMUST00000083080 160 ntBASIC-0.19□□□□□ -2.44
Ttc28Q80XJ3 Gm23453-201ENSMUST00000083326 106 ntBASIC-0.19□□□□□ -2.44
Ttc28Q80XJ3 Gm22738-201ENSMUST00000083440 147 ntBASIC-0.19□□□□□ -2.44
Ttc28Q80XJ3 Mir717-201ENSMUST00000102259 109 ntBASIC-0.2□□□□□ -2.44
Ttc28Q80XJ3 n-R5s8-201ENSMUST00000104121 118 ntBASIC-0.2□□□□□ -2.44
Ttc28Q80XJ3 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC-0.2□□□□□ -2.44
Ttc28Q80XJ3 Gm14671-201ENSMUST00000121790 262 ntBASIC-0.2□□□□□ -2.44
Ttc28Q80XJ3 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC-0.2□□□□□ -2.44
Ttc28Q80XJ3 Gm22236-201ENSMUST00000157093 106 ntBASIC-0.2□□□□□ -2.44
Ttc28Q80XJ3 Gm7925-201ENSMUST00000166690 401 ntBASIC-0.2□□□□□ -2.44
Ttc28Q80XJ3 Gm20543-201ENSMUST00000174200 726 ntBASIC-0.2□□□□□ -2.44
Ttc28Q80XJ3 Gm24080-201ENSMUST00000175178 232 ntBASIC-0.2□□□□□ -2.44
Ttc28Q80XJ3 Gm17067-202ENSMUST00000180131 123 ntBASIC-0.2□□□□□ -2.44
Ttc28Q80XJ3 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC-0.2□□□□□ -2.44
Ttc28Q80XJ3 Gm28740-201ENSMUST00000186142 215 ntBASIC-0.2□□□□□ -2.44
Ttc28Q80XJ3 Gm28661-201ENSMUST00000188231 681 ntBASIC-0.2□□□□□ -2.44
Ttc28Q80XJ3 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC-0.2□□□□□ -2.44
Ttc28Q80XJ3 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC-0.2□□□□□ -2.44
Ttc28Q80XJ3 Gm22303-201ENSMUST00000082686 122 ntBASIC-0.2□□□□□ -2.44
Ttc28Q80XJ3 Mir500-201ENSMUST00000093600 92 ntBASIC-0.2□□□□□ -2.44
Ttc28Q80XJ3 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC-0.2□□□□□ -2.44
Ttc28Q80XJ3 Gm24338-201ENSMUST00000104205 127 ntBASIC-0.2□□□□□ -2.44
Ttc28Q80XJ3 Gm15061-201ENSMUST00000121076 1046 ntBASIC-0.2□□□□□ -2.44
Ttc28Q80XJ3 Gm26501-201ENSMUST00000178307 107 ntBASIC-0.2□□□□□ -2.44
Ttc28Q80XJ3 Gm4076-201ENSMUST00000179230 965 ntBASIC-0.2□□□□□ -2.44
Ttc28Q80XJ3 Gm24565-201ENSMUST00000180099 107 ntBASIC-0.2□□□□□ -2.44
Ttc28Q80XJ3 Gm23862-201ENSMUST00000180342 94 ntBASIC-0.2□□□□□ -2.44
Ttc28Q80XJ3 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC-0.2□□□□□ -2.44
Ttc28Q80XJ3 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC-0.2□□□□□ -2.44
Ttc28Q80XJ3 Gm44311-201ENSMUST00000196448 69 ntBASIC-0.2□□□□□ -2.44
Ttc28Q80XJ3 AC157476.1-201ENSMUST00000215555 169 ntBASIC-0.2□□□□□ -2.44
Ttc28Q80XJ3 AC151902.1-201ENSMUST00000227800 375 ntBASIC-0.2□□□□□ -2.44
Ttc28Q80XJ3 Gm26457-201ENSMUST00000082678 78 ntBASIC-0.2□□□□□ -2.44
Ttc28Q80XJ3 Gm22809-201ENSMUST00000082743 156 ntBASIC-0.2□□□□□ -2.44
Ttc28Q80XJ3 Gm26125-201ENSMUST00000083357 107 ntBASIC-0.2□□□□□ -2.44
Ttc28Q80XJ3 Gm24764-201ENSMUST00000083686 199 ntBASIC-0.2□□□□□ -2.44
Ttc28Q80XJ3 Gm23104-201ENSMUST00000083722 104 ntBASIC-0.2□□□□□ -2.44
Ttc28Q80XJ3 Gm23103-201ENSMUST00000083725 107 ntBASIC-0.2□□□□□ -2.44
Ttc28Q80XJ3 Mir709-201ENSMUST00000102190 88 ntBASIC-0.21□□□□□ -2.44
Ttc28Q80XJ3 Mir880-201ENSMUST00000104809 78 ntBASIC-0.21□□□□□ -2.44
Ttc28Q80XJ3 Gm16032-201ENSMUST00000118534 168 ntBASIC-0.21□□□□□ -2.44
Ttc28Q80XJ3 Defb44-ps-201ENSMUST00000126871 219 ntBASIC-0.21□□□□□ -2.44
Ttc28Q80XJ3 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC-0.21□□□□□ -2.44
Ttc28Q80XJ3 Mir1936-201ENSMUST00000158699 93 ntBASIC-0.21□□□□□ -2.44
Ttc28Q80XJ3 Gm24799-201ENSMUST00000178431 79 ntBASIC-0.21□□□□□ -2.44
Ttc28Q80XJ3 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC-0.21□□□□□ -2.44
Ttc28Q80XJ3 Gm44419-201ENSMUST00000203338 229 ntBASIC-0.21□□□□□ -2.44
Ttc28Q80XJ3 Gm36189-201ENSMUST00000204113 523 ntBASIC-0.21□□□□□ -2.44
Ttc28Q80XJ3 Platr25-208ENSMUST00000222602 939 ntBASIC-0.21□□□□□ -2.44
Ttc28Q80XJ3 Gm26123-201ENSMUST00000083363 135 ntBASIC-0.21□□□□□ -2.44
Ttc28Q80XJ3 Mir155-201ENSMUST00000083463 65 ntBASIC-0.21□□□□□ -2.44
Ttc28Q80XJ3 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC-0.21□□□□□ -2.44
Ttc28Q80XJ3 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC-0.21□□□□□ -2.44
Ttc28Q80XJ3 Gm14792-201ENSMUST00000119725 258 ntBASIC-0.21□□□□□ -2.44
Ttc28Q80XJ3 Gm12686-201ENSMUST00000120546 397 ntBASIC-0.21□□□□□ -2.44
Ttc28Q80XJ3 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC-0.21□□□□□ -2.44
Ttc28Q80XJ3 Gm24345-201ENSMUST00000158706 124 ntBASIC-0.21□□□□□ -2.44
Ttc28Q80XJ3 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC-0.21□□□□□ -2.44
Ttc28Q80XJ3 Mir7038-201ENSMUST00000184833 71 ntBASIC-0.21□□□□□ -2.44
Ttc28Q80XJ3 Gm27964-201ENSMUST00000185195 62 ntBASIC-0.21□□□□□ -2.44
Ttc28Q80XJ3 Gm29352-201ENSMUST00000188054 544 ntBASIC-0.21□□□□□ -2.44
Ttc28Q80XJ3 Gm28299-201ENSMUST00000189908 339 ntBASIC-0.21□□□□□ -2.44
Ttc28Q80XJ3 Trdv3-201ENSMUST00000198551 309 ntBASIC-0.21□□□□□ -2.44
Ttc28Q80XJ3 Gm19790-201ENSMUST00000214414 251 ntBASIC-0.21□□□□□ -2.44
Ttc28Q80XJ3 AC159619.2-201ENSMUST00000222924 401 ntBASIC-0.21□□□□□ -2.44
Ttc28Q80XJ3 Gm22421-201ENSMUST00000083058 107 ntBASIC-0.21□□□□□ -2.44
Ttc28Q80XJ3 Gm26071-201ENSMUST00000083261 107 ntBASIC-0.21□□□□□ -2.44
Ttc28Q80XJ3 Gm25627-201ENSMUST00000084003 153 ntBASIC-0.21□□□□□ -2.44
Ttc28Q80XJ3 Gm23483-201ENSMUST00000104179 108 ntBASIC-0.22□□□□□ -2.44
Ttc28Q80XJ3 Gm11798-201ENSMUST00000119150 421 ntBASIC-0.22□□□□□ -2.44
Ttc28Q80XJ3 Gm15077-201ENSMUST00000122344 362 ntBASIC-0.22□□□□□ -2.44
Ttc28Q80XJ3 Gm22553-201ENSMUST00000157797 295 ntBASIC-0.22□□□□□ -2.44
Ttc28Q80XJ3 Gm23072-201ENSMUST00000158243 123 ntBASIC-0.22□□□□□ -2.44
Ttc28Q80XJ3 Gm24277-201ENSMUST00000158661 104 ntBASIC-0.22□□□□□ -2.44
Ttc28Q80XJ3 Gm22118-201ENSMUST00000175593 171 ntBASIC-0.22□□□□□ -2.44
Ttc28Q80XJ3 AC115735.2-201ENSMUST00000227135 351 ntBASIC-0.22□□□□□ -2.44
Ttc28Q80XJ3 CT030684.2-201ENSMUST00000228946 826 ntBASIC-0.22□□□□□ -2.44
Ttc28Q80XJ3 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC-0.22□□□□□ -2.44
Ttc28Q80XJ3 Gm23442-201ENSMUST00000082919 134 ntBASIC-0.22□□□□□ -2.44
Ttc28Q80XJ3 Mir200a-201ENSMUST00000083466 90 ntBASIC-0.22□□□□□ -2.44
Ttc28Q80XJ3 Gm14931-201ENSMUST00000111079 253 ntBASIC-0.22□□□□□ -2.44
Ttc28Q80XJ3 Gm14417-201ENSMUST00000120036 1074 ntBASIC-0.22□□□□□ -2.44
Ttc28Q80XJ3 Gm25149-201ENSMUST00000157119 82 ntBASIC-0.22□□□□□ -2.44
Ttc28Q80XJ3 Gm24868-201ENSMUST00000157265 136 ntBASIC-0.22□□□□□ -2.44
Ttc28Q80XJ3 Gm24077-201ENSMUST00000158183 136 ntBASIC-0.22□□□□□ -2.44
Ttc28Q80XJ3 Gm25600-201ENSMUST00000158357 106 ntBASIC-0.22□□□□□ -2.44
Ttc28Q80XJ3 Gm18185-201ENSMUST00000186725 667 ntBASIC-0.22□□□□□ -2.44
Retrieved 100 of 76,532 protein–RNA pairs in 158.8 ms